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Search of human proteins with 31542723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542723 spermatogenesis associated 20 [Homo sapiens]
(802 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542723 spermatogenesis associated 20 [Homo sapiens] 1650 0.0
gi|66529407 tensin [Homo sapiens] 37 0.095
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 36 0.12
gi|163659918 sacsin [Homo sapiens] 32 2.3
gi|34101282 sodium channel, nonvoltage-gated 1, delta isoform 2 ... 32 2.3
gi|194353989 sodium channel, nonvoltage-gated 1, delta isoform 1... 32 2.3
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 32 2.3
gi|117414152 transcription factor 19 [Homo sapiens] 30 6.8
gi|117414156 transcription factor 19 [Homo sapiens] 30 6.8
gi|28827801 breast cancer membrane protein 11 [Homo sapiens] 30 6.8
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens] 30 6.8
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens] 30 6.8
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 30 8.9
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 8.9
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 8.9
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 8.9
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 30 8.9
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 30 8.9
>gi|31542723 spermatogenesis associated 20 [Homo sapiens]
Length = 802
Score = 1650 bits (4272), Expect = 0.0
Identities = 802/802 (100%), Positives = 802/802 (100%)
Query: 1 MLGARAWLGRVLLLPRAGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVP 60
MLGARAWLGRVLLLPRAGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVP
Sbjct: 1 MLGARAWLGRVLLLPRAGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVP 60
Query: 61 MPAGGKGSHPSSTPQRVPNRLIHEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKPIFLS 120
MPAGGKGSHPSSTPQRVPNRLIHEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKPIFLS
Sbjct: 61 MPAGGKGSHPSSTPQRVPNRLIHEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKPIFLS 120
Query: 121 VGYSTCHWCHMMEEESFQNEEIGRLLSEDFVSVKVDREERPDVDKVYMTFVQATSSGGGW 180
VGYSTCHWCHMMEEESFQNEEIGRLLSEDFVSVKVDREERPDVDKVYMTFVQATSSGGGW
Sbjct: 121 VGYSTCHWCHMMEEESFQNEEIGRLLSEDFVSVKVDREERPDVDKVYMTFVQATSSGGGW 180
Query: 181 PMNVWLTPNLQPFVGGTYFPPEDGLTRVGFRTVLLRIREQWKQNKNTLLENSQRVTTALL 240
PMNVWLTPNLQPFVGGTYFPPEDGLTRVGFRTVLLRIREQWKQNKNTLLENSQRVTTALL
Sbjct: 181 PMNVWLTPNLQPFVGGTYFPPEDGLTRVGFRTVLLRIREQWKQNKNTLLENSQRVTTALL 240
Query: 241 ARSEISVGDRQLPPSAATVNNRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSH 300
ARSEISVGDRQLPPSAATVNNRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSH
Sbjct: 241 ARSEISVGDRQLPPSAATVNNRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSH 300
Query: 301 RLTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVA 360
RLTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVA
Sbjct: 301 RLTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVA 360
Query: 361 YSQAFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERGQRPKEGAYYVWT 420
YSQAFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERGQRPKEGAYYVWT
Sbjct: 361 YSQAFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERGQRPKEGAYYVWT 420
Query: 421 VKEVQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGNISPSQDPKGELQGQNVLTVRYSLE 480
VKEVQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGNISPSQDPKGELQGQNVLTVRYSLE
Sbjct: 421 VKEVQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGNISPSQDPKGELQGQNVLTVRYSLE 480
Query: 481 LTAARFGLDVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAAWNGLMVSGYAVTGAVLG 540
LTAARFGLDVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAAWNGLMVSGYAVTGAVLG
Sbjct: 481 LTAARFGLDVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAAWNGLMVSGYAVTGAVLG 540
Query: 541 QDRLINYATNGAKFLKRHMFDVASGRLMRTCYTGPGGTVEHSNPPCWGFLEDYAFVVRGL 600
QDRLINYATNGAKFLKRHMFDVASGRLMRTCYTGPGGTVEHSNPPCWGFLEDYAFVVRGL
Sbjct: 541 QDRLINYATNGAKFLKRHMFDVASGRLMRTCYTGPGGTVEHSNPPCWGFLEDYAFVVRGL 600
Query: 601 LDLYEASQESAWLEWALRLQDTQDKLFWDSQGGGYFCSEAELGAGLPLRLKDDQDGAEPS 660
LDLYEASQESAWLEWALRLQDTQDKLFWDSQGGGYFCSEAELGAGLPLRLKDDQDGAEPS
Sbjct: 601 LDLYEASQESAWLEWALRLQDTQDKLFWDSQGGGYFCSEAELGAGLPLRLKDDQDGAEPS 660
Query: 661 ANSVSAHNLLRLHGFTGHKDWMDKCVCLLTAFSERMRRVPVALPEMVRALSAQQQTLKQI 720
ANSVSAHNLLRLHGFTGHKDWMDKCVCLLTAFSERMRRVPVALPEMVRALSAQQQTLKQI
Sbjct: 661 ANSVSAHNLLRLHGFTGHKDWMDKCVCLLTAFSERMRRVPVALPEMVRALSAQQQTLKQI 720
Query: 721 VICGDRQAKDTKALVQCVHSVYIPNKVLILADGDPSSFLSRQLPFLSTLRRLEDQATAYV 780
VICGDRQAKDTKALVQCVHSVYIPNKVLILADGDPSSFLSRQLPFLSTLRRLEDQATAYV
Sbjct: 721 VICGDRQAKDTKALVQCVHSVYIPNKVLILADGDPSSFLSRQLPFLSTLRRLEDQATAYV 780
Query: 781 CENQACSVPITDPCELRKLLHP 802
CENQACSVPITDPCELRKLLHP
Sbjct: 781 CENQACSVPITDPCELRKLLHP 802
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 36.6 bits (83), Expect = 0.095
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 17 AGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSSTPQR 76
A A L S+ PG WP P S SSR + T S S +P+G H TP+
Sbjct: 724 AAAPLHKSQSVPGAWPGASPLSSQPLSGSSR-QSHPLTQSRSGYIPSG----HSLGTPEP 778
Query: 77 VPNRLIHEKSPYLLQHAYNPVDWYP 101
P + P +Y+P D+ P
Sbjct: 779 APRASLESVPP---GRSYSPYDYQP 800
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 36.2 bits (82), Expect = 0.12
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 29 GVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSSTPQRVPNRLI 82
G+W TW P GS + ++ + T SS V + +G GS SS P + L+
Sbjct: 1171 GLWELTWSQALPDLGSHAMTENFTPTSSSGVDISSGSGGSGESSVPCAMDGTLV 1224
>gi|163659918 sacsin [Homo sapiens]
Length = 4579
Score = 32.0 bits (71), Expect = 2.3
Identities = 35/137 (25%), Positives = 50/137 (36%), Gaps = 23/137 (16%)
Query: 40 PSRGSSSRDKDRSATVSS---------SVPMPAGGKGSHPSSTPQRVPNRLIHEKSPYLL 90
P S SRD S S S+P G+ SH +S+ + P +L P +L
Sbjct: 4248 PEESSQSRDSAPSTPTSPTEFLTPGLRSIPPLFSGRESHKTSSKHQSPKKLKVNSLPEIL 4307
Query: 91 QHAYNPVDWYPWGQEAFDKARKENKPIFLSVGYSTCHWCHMMEEESFQNE-------EIG 143
+ + V ++A+ E K I + Y H E NE EI
Sbjct: 4308 KEVTSVV------EQAWKLPESERKKIIRRL-YLKWHPDKNPENHDIANEVFKHLQNEIN 4360
Query: 144 RLLSEDFVSVKVDREER 160
RL + F+ DR R
Sbjct: 4361 RLEKQAFLDQNADRASR 4377
>gi|34101282 sodium channel, nonvoltage-gated 1, delta isoform 2
[Homo sapiens]
Length = 638
Score = 32.0 bits (71), Expect = 2.3
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 25 RRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSSTPQRVPNRLI 82
RR W +WP SP+ G+SS + +S +P PAGG P + +P ++
Sbjct: 563 RRLRRAW-FSWPRASPASGASSIKPE-----ASQMPPPAGGTSDDPEPSGPHLPRVML 614
>gi|194353989 sodium channel, nonvoltage-gated 1, delta isoform 1
[Homo sapiens]
Length = 704
Score = 32.0 bits (71), Expect = 2.3
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 25 RRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSSTPQRVPNRLI 82
RR W +WP SP+ G+SS + +S +P PAGG P + +P ++
Sbjct: 629 RRLRRAW-FSWPRASPASGASSIKPE-----ASQMPPPAGGTSDDPEPSGPHLPRVML 680
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 32.0 bits (71), Expect = 2.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 47 RDKDRSATVSSSVPMPAGGKGSHPSSTPQRVP 78
R +D S S PAGGK S STPQ+ P
Sbjct: 770 RKRDSSTQPPKSAKPPAGGKSSQQPSTPQQAP 801
>gi|117414152 transcription factor 19 [Homo sapiens]
Length = 345
Score = 30.4 bits (67), Expect = 6.8
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 41 SRGSSSRDKDRSATVSSS--------VPMPAGGKGSHPSSTPQRVPNRLIHEKSPYLLQH 92
S GS S+ + + T S S VP P G G+ PS+ PQR + +H L
Sbjct: 178 SIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDE 237
Query: 93 AYNPVDWYPWGQEAFDKARKENKPI 117
+ P + P E K R + P+
Sbjct: 238 SEPPENPPPVLMEPRKKLRVDKAPL 262
>gi|117414156 transcription factor 19 [Homo sapiens]
Length = 345
Score = 30.4 bits (67), Expect = 6.8
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 41 SRGSSSRDKDRSATVSSS--------VPMPAGGKGSHPSSTPQRVPNRLIHEKSPYLLQH 92
S GS S+ + + T S S VP P G G+ PS+ PQR + +H L
Sbjct: 178 SIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDE 237
Query: 93 AYNPVDWYPWGQEAFDKARKENKPI 117
+ P + P E K R + P+
Sbjct: 238 SEPPENPPPVLMEPRKKLRVDKAPL 262
>gi|28827801 breast cancer membrane protein 11 [Homo sapiens]
Length = 166
Score = 30.4 bits (67), Expect = 6.8
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 84 EKSPYLLQHAY-NPVDWYPWGQEAFDKARKENKPIFLSVGYSTCHWCHMMEEESFQNEEI 142
++ P L + + + W +E A+K KP+ + C + +++ QNEEI
Sbjct: 28 KRPPQTLSRGWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEI 87
Query: 143 GRLLSEDFVSVKVDRE 158
+ F+ + + E
Sbjct: 88 QEMAQNKFIMLNLMHE 103
>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
Length = 1523
Score = 30.4 bits (67), Expect = 6.8
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 364 AFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERGQRPKEGAYYVWTVKE 423
A +L GD+ DVA G+ + RS ++ G ++ P + ++ Y +K
Sbjct: 837 AKRLLGDD---DVADGLAFHAKRS--YQPHGRWAERAGQEPLKTILDAQDLDCYFTPMKP 891
Query: 424 VQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGNISPSQDPKGELQGQNVLTVRYSLELTA 483
+ L +L + EP + LL + EAG PS P+ + + + YSLE
Sbjct: 892 --ESLENSILDSLEPQSLASLLSESESPQEAGRGHPSFLPQQKESSEASELILYSLEAEV 949
Query: 484 ARFGLDVEAVRTLLNSG 500
G D + R + +G
Sbjct: 950 TVTGTDSQYCRKEVEAG 966
>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
Length = 1518
Score = 30.4 bits (67), Expect = 6.8
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 364 AFQLSGDEFYSDVAKGILQYVARSLSHRSGGFYSAEDADSPPERGQRPKEGAYYVWTVKE 423
A +L GD+ DVA G+ + RS ++ G ++ P + ++ Y +K
Sbjct: 837 AKRLLGDD---DVADGLAFHAKRS--YQPHGRWAERAGQEPLKTILDAQDLDCYFTPMKP 891
Query: 424 VQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGNISPSQDPKGELQGQNVLTVRYSLELTA 483
+ L +L + EP + LL + EAG PS P+ + + + YSLE
Sbjct: 892 --ESLENSILDSLEPQSLASLLSESESPQEAGRGHPSFLPQQKESSEASELILYSLEAEV 949
Query: 484 ARFGLDVEAVRTLLNSG 500
G D + R + +G
Sbjct: 950 TVTGTDSQYCRKEVEAG 966
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 30.0 bits (66), Expect = 8.9
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 78 PNRLI--HEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKP-IFLSVGYSTCHWCHMMEE 134
PN++ +KSP L H+++ + W QE + ++ P + LS S H+
Sbjct: 5157 PNKMYLKAKKSPVLHTHSFSDLQWKTREQEEEKVQKVKSGPGVMLSKSPSRSSPLHLNVN 5216
Query: 135 ESFQNEEIGRLLSEDFVSVKVDREERPDVD 164
FQ E I L F VK+ + PD +
Sbjct: 5217 TGFQEESIPILTRPSFPLVKL--QVSPDTE 5244
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 30.0 bits (66), Expect = 8.9
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 78 PNRLI--HEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKP-IFLSVGYSTCHWCHMMEE 134
PN++ +KSP L H+++ + W QE + ++ P + LS S H+
Sbjct: 5005 PNKMYLKAKKSPVLHTHSFSDLQWKTREQEEEKVQKVKSGPGVMLSKSPSRSSPLHLNVN 5064
Query: 135 ESFQNEEIGRLLSEDFVSVKVDREERPDVD 164
FQ E I L F VK+ + PD +
Sbjct: 5065 TGFQEESIPILTRPSFPLVKL--QVSPDTE 5092
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 30.0 bits (66), Expect = 8.9
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 78 PNRLI--HEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKP-IFLSVGYSTCHWCHMMEE 134
PN++ +KSP L H+++ + W QE + ++ P + LS S H+
Sbjct: 5005 PNKMYLKAKKSPVLHTHSFSDLQWKTREQEEEKVQKVKSGPGVMLSKSPSRSSPLHLNVN 5064
Query: 135 ESFQNEEIGRLLSEDFVSVKVDREERPDVD 164
FQ E I L F VK+ + PD +
Sbjct: 5065 TGFQEESIPILTRPSFPLVKL--QVSPDTE 5092
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 30.0 bits (66), Expect = 8.9
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 78 PNRLI--HEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKP-IFLSVGYSTCHWCHMMEE 134
PN++ +KSP L H+++ + W QE + ++ P + LS S H+
Sbjct: 5005 PNKMYLKAKKSPVLHTHSFSDLQWKTREQEEEKVQKVKSGPGVMLSKSPSRSSPLHLNVN 5064
Query: 135 ESFQNEEIGRLLSEDFVSVKVDREERPDVD 164
FQ E I L F VK+ + PD +
Sbjct: 5065 TGFQEESIPILTRPSFPLVKL--QVSPDTE 5092
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 30.0 bits (66), Expect = 8.9
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 13 LLPRAGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSS 72
LLP G +A P P +P SP S + R+ +P P GS P S
Sbjct: 128 LLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR-----MPPPRPDVGSKPDS 182
Query: 73 TPQRVPN 79
P VP+
Sbjct: 183 IPPPVPS 189
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 30.0 bits (66), Expect = 8.9
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 13 LLPRAGAGLAASRRCPGVWPRTWPHRSPSRGSSSRDKDRSATVSSSVPMPAGGKGSHPSS 72
LLP G +A P P +P SP S + R+ +P P GS P S
Sbjct: 128 LLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNR-----MPPPRPDVGSKPDS 182
Query: 73 TPQRVPN 79
P VP+
Sbjct: 183 IPPPVPS 189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,182,323
Number of Sequences: 37866
Number of extensions: 1596442
Number of successful extensions: 4363
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4340
Number of HSP's gapped (non-prelim): 36
length of query: 802
length of database: 18,247,518
effective HSP length: 110
effective length of query: 692
effective length of database: 14,082,258
effective search space: 9744922536
effective search space used: 9744922536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.