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Search of human proteins with 31377765
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens] 1111 0.0
gi|14249524 transmembrane protein 87B [Homo sapiens] 447 e-126
gi|160333222 transmembrane protein 87A isoform 2 [Homo sapiens] 345 6e-95
gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens] 61 2e-09
gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo sapi... 61 3e-09
gi|130489591 G protein-coupled receptor 108 isoform 2 [Homo sapi... 59 2e-08
gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo sapi... 53 6e-07
gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo sapi... 43 7e-04
gi|24797141 potassium inwardly-rectifying channel J5 [Homo sapiens] 32 1.2
gi|156105707 SNF related kinase [Homo sapiens] 32 1.2
gi|156105705 SNF related kinase [Homo sapiens] 32 1.2
gi|35493801 ring finger protein 19 [Homo sapiens] 32 1.5
gi|35493782 ring finger protein 19 [Homo sapiens] 32 1.5
gi|156616299 tubulin, gamma complex associated protein 5 isoform... 32 2.0
gi|156616297 tubulin, gamma complex associated protein 5 isoform... 32 2.0
gi|188219549 ankyrin repeat domain 32 [Homo sapiens] 32 2.0
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 31 2.6
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 31 2.6
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 31 2.6
gi|66472382 nischarin [Homo sapiens] 31 2.6
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 31 3.4
gi|13376856 solute carrier family 19, member 3 [Homo sapiens] 31 3.4
gi|4504843 potassium inwardly-rectifying channel J6 [Homo sapiens] 30 4.4
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 30 4.4
gi|24415404 MDN1, midasin homolog [Homo sapiens] 30 4.4
gi|33391150 nucleoplasmin 2 [Homo sapiens] 30 4.4
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 30 5.8
gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide i... 30 5.8
gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide iso... 30 5.8
gi|54607053 GCN1 general control of amino-acid synthesis 1-like ... 30 5.8
>gi|31377765 transmembrane protein 87A isoform 1 [Homo sapiens]
Length = 555
Score = 1111 bits (2873), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF 60
MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF
Sbjct: 1 MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF 60
Query: 61 RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT 120
RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT
Sbjct: 61 RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT 120
Query: 121 SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDA 180
SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDA
Sbjct: 121 SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDA 180
Query: 181 PYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF 240
PYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF
Sbjct: 181 PYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF 240
Query: 241 GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELL 300
GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELL
Sbjct: 241 GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELL 300
Query: 301 SAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLA 360
SAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLA
Sbjct: 301 SAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLA 360
Query: 361 SLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFII 420
SLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFII
Sbjct: 361 SLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFII 420
Query: 421 WTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE 480
WTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE
Sbjct: 421 WTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE 480
Query: 481 DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDS 540
DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDS
Sbjct: 481 DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDS 540
Query: 541 DEERMITHFERSKME 555
DEERMITHFERSKME
Sbjct: 541 DEERMITHFERSKME 555
>gi|14249524 transmembrane protein 87B [Homo sapiens]
Length = 555
Score = 447 bits (1151), Expect = e-126
Identities = 256/532 (48%), Positives = 328/532 (61%), Gaps = 28/532 (5%)
Query: 31 PATVAAA-DRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCD--LSLNITWYLKSA 87
PA V A + W + F K +F +T I L C + I W+LK
Sbjct: 37 PAAVRAVPELGLWLETVNDKSGPLIFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYH 96
Query: 88 DCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ-NCSELFKTQTFSGDFMHRLP 146
C+NE N LE+L +K LS L NC P
Sbjct: 97 TCHNEHSN---------LEELFQKHKLSVDEDFCHYLKNDNCWTTKNENLDCNSDSQVFP 147
Query: 147 LLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLF 206
L K+ + + +M +T +D +IFIV I ++ S N
Sbjct: 148 SLNNKELINIRNVS----NQERSMDVVARTQKDGFHIFIVSIKTENTDASWNLN------ 197
Query: 207 TMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVI 266
+++ + GP+ Y++ D+PLMIF+MVMCIVY+L+G+LWL WSACYW+D+LRIQFWI AVI
Sbjct: 198 -VSLSMIGPHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWIAAVI 256
Query: 267 FLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRL 326
FLGMLEKAVFY+E+QNI G S QG LI AEL+SA+KR+LAR LVIIVSLGYGIVKPRL
Sbjct: 257 FLGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRL 316
Query: 327 GVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLA-SLAFIPLAFLDTALCWWIFISLTQT 385
G +H+V+ G LYL+F+ +EGV+RV G LA L I LA +D+ W+IFISL QT
Sbjct: 317 GTVMHRVIGLGLLYLIFAAVEGVMRVIGGSNHLAVVLDDIILAVIDSIFVWFIFISLAQT 376
Query: 386 MKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIW 445
MK L+LR+N VK SLYRHF NTLI AV ASIVF+ WTT FRI CQSDW E WVDDA W
Sbjct: 377 MKTLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIAKCQSDWMERWVDDAFW 436
Query: 446 RLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESF-EGMKMRSTKQEP 504
LFS+IL VIM LWRPSANNQR+AF PL ++ +++ ++ + E+ EG+K+R++K
Sbjct: 437 SFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRASKSVS 496
Query: 505 NGNSKVNKAQ--EDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKM 554
NG +K ++ ++DLKWVEEN+PSS TDVALP L+DSDEE M KM
Sbjct: 497 NGTAKPATSENFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKM 548
>gi|160333222 transmembrane protein 87A isoform 2 [Homo sapiens]
Length = 181
Score = 345 bits (885), Expect = 6e-95
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF 60
MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF
Sbjct: 1 MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILF 60
Query: 61 RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT 120
RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT
Sbjct: 61 RNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQT 120
Query: 121 SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKT 168
SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKT
Sbjct: 121 SSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKT 168
>gi|56711308 G protein-coupled receptor 107 isoform 3 [Homo sapiens]
Length = 552
Score = 61.2 bits (147), Expect = 2e-09
Identities = 67/326 (20%), Positives = 133/326 (40%), Gaps = 48/326 (14%)
Query: 206 FTMTVEV--KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIG 263
F++ +E+ K P YL+ + PL ++ M + L G +W+ D+ +I + +
Sbjct: 240 FSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMA 299
Query: 264 AVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVK 323
A+ F L ++ I +G ++G ++ + +K +L + ++ G+ +K
Sbjct: 300 ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIK 359
Query: 324 PRLG--------VTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALC 375
L + + V+A Y++ E G D L +D C
Sbjct: 360 HILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKD-------SLFLVDLLCC 412
Query: 376 WWIFISLTQTMKLL--------KLRRNIVKLSLYRHFTNTLILAV--AASIVFIIWTTMK 425
I + +++ L K N+ KL L+RH+ ++ + I F++ +
Sbjct: 413 GAILFPVVWSIRHLQEASATDGKAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVP 472
Query: 426 FRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVL----WRPSANNQRFAFSPLSEEEEED 481
F+ W+ W +++LL V VL +RP+++N S +EEED
Sbjct: 473 FQ-------WK--W----LYQLLDETATLVFFVLTGYKFRPASDNPYLQLS----QEEED 515
Query: 482 EQKEPMLKESFEGMKMRSTKQEPNGN 507
+ E ++ S M+ K+ NG+
Sbjct: 516 LEMESVVTTSGVMESMKKVKKVTNGS 541
>gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo
sapiens]
Length = 543
Score = 60.8 bits (146), Expect = 3e-09
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 64/364 (17%)
Query: 182 YIFIVHIGISSSKESSK--------ENSLSNL-----FTMTVEVKGPYEYLTLEDYPLMI 228
Y F H+ I S E + NS+ T+ + K P +L+ + PL
Sbjct: 203 YNFSFHVVIGSQAEEGQYSLNFHNCNNSVPGKEHPFDITVMIREKNPDGFLSAAEMPLFK 262
Query: 229 FFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGE 288
+MVM ++ G+ W++ + +I + + A+ F + + I +G
Sbjct: 263 LYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGH 322
Query: 289 SVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRL--------GVTLHKVVVAGALY 340
++G ++ + +K +L + ++ G+ +K L G+ + V+A Y
Sbjct: 323 PIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAY 382
Query: 341 LLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLL--------KLR 392
++ E GA +D I L +D C I + +++ L K+
Sbjct: 383 IIIESRE-----EGA-SDYVLWKEI-LFLVDLICCGAILFPVVWSIRHLQDASGTDGKVA 435
Query: 393 RNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMI 452
N+ KL L+RH+ +I V + + I + V Q W +++LL
Sbjct: 436 VNLAKLKLFRHYYVMVICYVYFTRIIAILLQV---AVPFQWQW--------LYQLLVEGS 484
Query: 453 LFVIMVL----WRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNS 508
VL ++P+ NN + L +E+EED Q E ++ +S G + G S
Sbjct: 485 TLAFFVLTGYKFQPTGNN---PYLQLPQEDEEDVQMEQVMTDS--GFR--------EGLS 531
Query: 509 KVNK 512
KVNK
Sbjct: 532 KVNK 535
>gi|130489591 G protein-coupled receptor 108 isoform 2 [Homo
sapiens]
Length = 301
Score = 58.5 bits (140), Expect = 2e-08
Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 51/323 (15%)
Query: 210 VEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLG 269
+ K P +L+ + PL +MVM ++ G+ W++ + +I + + A+ F
Sbjct: 2 IREKNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTK 61
Query: 270 MLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRL--- 326
+ + I +G ++G ++ + +K +L + ++ G+ +K L
Sbjct: 62 SISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDK 121
Query: 327 -----GVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFIS 381
G+ + V+A Y++ E GA +D I L +D C I
Sbjct: 122 EKKVFGIVIPMQVLANVAYIIIESRE-----EGA-SDYVLWKEI-LFLVDLICCGAILFP 174
Query: 382 LTQTMKLL--------KLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQS 433
+ +++ L K+ N+ KL L+RH+ +I V + + I + V Q
Sbjct: 175 VVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQV---AVPFQW 231
Query: 434 DWRELWVDDAIWRLLFSMILFVIMVL----WRPSANNQRFAFSPLSEEEEEDEQKEPMLK 489
W +++LL VL ++P+ NN + L +E+EED Q E ++
Sbjct: 232 QW--------LYQLLVEGSTLAFFVLTGYKFQPTGNN---PYLQLPQEDEEDVQMEQVMT 280
Query: 490 ESFEGMKMRSTKQEPNGNSKVNK 512
+S G + G SKVNK
Sbjct: 281 DS--GFR--------EGLSKVNK 293
>gi|211971060 G protein-coupled receptor 107 isoform 2 [Homo
sapiens]
Length = 571
Score = 53.1 bits (126), Expect = 6e-07
Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 67/345 (19%)
Query: 206 FTMTVEV--KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIG 263
F++ +E+ K P YL+ + PL ++ M + L G +W+ D+ +I + +
Sbjct: 240 FSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMA 299
Query: 264 AVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVK 323
A+ F L ++ I +G ++G ++ + +K +L + ++ G+ +K
Sbjct: 300 ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIK 359
Query: 324 PRLG--------VTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALC 375
L + + V+A Y++ E G D L +D C
Sbjct: 360 HILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKD-------SLFLVDLLCC 412
Query: 376 WWIFISLTQTMKLLK--------------------LRR-------NIVKLSLYRHFTNTL 408
I + +++ L+ LR N+ KL L+RH+ +
Sbjct: 413 GAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIAAINLAKLKLFRHYYVLI 472
Query: 409 ILAV--AASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVL----WRP 462
+ + I F++ + F+ W+ W +++LL V VL +RP
Sbjct: 473 VCYIYFTRIIAFLLKLAVPFQ-------WK--W----LYQLLDETATLVFFVLTGYKFRP 519
Query: 463 SANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGN 507
+++N S +EEED + E ++ S M+ K+ NG+
Sbjct: 520 ASDNPYLQLS----QEEEDLEMESVVTTSGVMESMKKVKKVTNGS 560
>gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo
sapiens]
Length = 600
Score = 43.1 bits (100), Expect = 7e-04
Identities = 29/152 (19%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 206 FTMTVEV--KGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIG 263
F++ +E+ K P YL+ + PL ++ M + L G +W+ D+ +I + +
Sbjct: 240 FSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMA 299
Query: 264 AVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVK 323
A+ F L ++ I +G ++G ++ + +K +L + ++ G+ +K
Sbjct: 300 ALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIK 359
Query: 324 PRLG--------VTLHKVVVAGALYLLFSGME 347
L + + V+A Y++ E
Sbjct: 360 HILSDKDKKIFMIVIPLQVLANVAYIIIESTE 391
Score = 32.0 bits (71), Expect = 1.5
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 394 NIVKLSLYRHFTNTLILAVAAS--IVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSM 451
N+ KL L+RH+ ++ + + I F++ + F+ W+ W +++LL
Sbjct: 487 NLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQ-------WK--W----LYQLLDET 533
Query: 452 ILFVIMVL----WRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGN 507
V VL +RP+++N S +EEED + E ++ S M+ K+ NG+
Sbjct: 534 ATLVFFVLTGYKFRPASDNPYLQLS----QEEEDLEMESVVTTSGVMESMKKVKKVTNGS 589
>gi|24797141 potassium inwardly-rectifying channel J5 [Homo sapiens]
Length = 419
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 202 LSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWR---DLLRI 258
LS+LFT V++K + L++F MV + ++ FG +W W Y R D +
Sbjct: 74 LSDLFTTLVDLKWRFN--------LLVFTMVYTVTWLFFGFIW--WLIAYIRGDLDHVGD 123
Query: 259 QFWIGAV 265
Q WI V
Sbjct: 124 QEWIPCV 130
>gi|156105707 SNF related kinase [Homo sapiens]
Length = 765
Score = 32.3 bits (72), Expect = 1.2
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 461 RPSANNQRFAFSPLSEEEEEDEQKEPM--------LKESFEGMKMRSTKQEPNGNSKVNK 512
+P+A+ ++ F +EEE++E K+PM ++ ++ S K P N +
Sbjct: 433 KPTASGRKCLFRVEEDEEEDEEDKKPMSLSTQVVLRRKPSVTNRLTSRKSAPVLNQIFEE 492
Query: 513 AQEDDLKWVEENVPSSVT 530
+ DD ++EN+P ++
Sbjct: 493 GESDDEFDMDENLPPKLS 510
>gi|156105705 SNF related kinase [Homo sapiens]
Length = 765
Score = 32.3 bits (72), Expect = 1.2
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 461 RPSANNQRFAFSPLSEEEEEDEQKEPM--------LKESFEGMKMRSTKQEPNGNSKVNK 512
+P+A+ ++ F +EEE++E K+PM ++ ++ S K P N +
Sbjct: 433 KPTASGRKCLFRVEEDEEEDEEDKKPMSLSTQVVLRRKPSVTNRLTSRKSAPVLNQIFEE 492
Query: 513 AQEDDLKWVEENVPSSVT 530
+ DD ++EN+P ++
Sbjct: 493 GESDDEFDMDENLPPKLS 510
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 32.0 bits (71), Expect = 1.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 489 KESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDS 540
KE+ G K +S K GN K+N+ +ED + E ++ ++ P+L DS
Sbjct: 665 KEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDS 716
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 32.0 bits (71), Expect = 1.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 489 KESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDS 540
KE+ G K +S K GN K+N+ +ED + E ++ ++ P+L DS
Sbjct: 665 KEATAGKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDS 716
>gi|156616299 tubulin, gamma complex associated protein 5 isoform b
[Homo sapiens]
Length = 1024
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 475 SEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVN-----KAQEDDLKWVEENV 525
SEE EE+ ++P+ +E R+ +E + N K++ K + DD W+E +V
Sbjct: 165 SEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHV 220
>gi|156616297 tubulin, gamma complex associated protein 5 isoform a
[Homo sapiens]
Length = 1024
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 475 SEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVN-----KAQEDDLKWVEENV 525
SEE EE+ ++P+ +E R+ +E + N K++ K + DD W+E +V
Sbjct: 165 SEESEEENDQQPLSREDSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHV 220
>gi|188219549 ankyrin repeat domain 32 [Homo sapiens]
Length = 1058
Score = 31.6 bits (70), Expect = 2.0
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 362 LAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIW 421
LA++ L A+ +WIF+ LK+ RN++ RH ++ L V+ S
Sbjct: 615 LAYLLAGILGAAIDYWIFLG-------LKMGRNVM-----RHMSDDLGSYVSLSCDDFSS 662
Query: 422 TTMKFRIVTCQSDWRELWVDDAIWRLL 448
++ I + S W +++V +A+++ L
Sbjct: 663 QELEIFICSFSSSWLQMFVAEAVFKKL 689
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 31.2 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 476 EEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVE 522
EEEEE+E++E +E E +S + +G K K D WV+
Sbjct: 308 EEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVK 354
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 31.2 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 476 EEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVE 522
EEEEE+E++E +E E +S + +G K K D WV+
Sbjct: 308 EEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVK 354
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 31.2 bits (69), Expect = 2.6
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 472 SPLSEEEEEDE-------------QKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDL 518
+P SEE E E ++ PM++E E ++ K+EP K K +E++
Sbjct: 1644 TPESEESESTESEGEKARKNIVLARRRPMVEEVKE---VKGRKEEPQEEQKEPKMEEEEH 1700
Query: 519 KWVEENVPSSVTDVALPALLDSDEE 543
EE+ P+ V + P D EE
Sbjct: 1701 SEEEESGPAPVEESTDPEAQDIPEE 1725
>gi|66472382 nischarin [Homo sapiens]
Length = 1504
Score = 31.2 bits (69), Expect = 2.6
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 460 WRPSANNQRFAFSPLSEEE-EEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDL 518
W +AN + EEE EE+E++E + + + M ++E G + +E++
Sbjct: 621 WIEAANQREEGQGEQGEEEDEEEEEEEDVAENRYFEMGPPDVEEEEGGGQGEEEEEEEED 680
Query: 519 KWVEENVPSSVTDVALPALLDSDEERMITHFERSKM 554
+ EE +AL L +DE+ ++ H K+
Sbjct: 681 EEAEEE------RLALEWALGADEDFLLEHIRILKV 710
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 30.8 bits (68), Expect = 3.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 476 EEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALP 535
EEEEE+E++E +ES E ++E G S+ ++ E+D K +E D
Sbjct: 532 EEEEEEEEEEEEDEESEE-------EEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPS 584
Query: 536 ALLDSDEE 543
+ SD E
Sbjct: 585 KEMSSDSE 592
>gi|13376856 solute carrier family 19, member 3 [Homo sapiens]
Length = 496
Score = 30.8 bits (68), Expect = 3.4
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 448 LFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNG- 506
L S+ + + L+ P F + S E ++ P+L+E+ EG +Q+P
Sbjct: 177 LASVSVAFLFSLFLPMPKKSMFFHAKPSREIKKSSSVNPVLEETHEGEAPGCEEQKPTSE 236
Query: 507 ----NSKVNKAQEDDLKWVEENVPSSVT 530
+ K+NK Q + LK PS+VT
Sbjct: 237 ILSTSGKLNKGQLNSLK------PSNVT 258
>gi|4504843 potassium inwardly-rectifying channel J6 [Homo sapiens]
Length = 423
Score = 30.4 bits (67), Expect = 4.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 202 LSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWR 253
L+++FT V++K + L+IF MV + ++ FG++W W Y R
Sbjct: 77 LTDIFTTLVDLKWRFN--------LLIFVMVYTVTWLFFGMIW--WLIAYIR 118
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 30.4 bits (67), Expect = 4.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 476 EEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQ 514
EEE+E+E++E +E EG KM K E ++++ + Q
Sbjct: 145 EEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEIQRTQ 183
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 30.4 bits (67), Expect = 4.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 459 LWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNS 508
L+R + N R A S EEE E ++ P+ ++ F + ++ T +E G S
Sbjct: 3552 LYRYRSRNSRTALSEEEEEEREFRKQFPLHEKDFADILVQPTLEENKGTS 3601
>gi|33391150 nucleoplasmin 2 [Homo sapiens]
Length = 214
Score = 30.4 bits (67), Expect = 4.4
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 464 ANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEE 523
+ +R+ S L+ EEEE+E+ E +E + + + ++ ++ ++ +K V+
Sbjct: 116 SGQERYEASDLTWEEEEEEEGEEEEEEE---------EDDEDEDADISLEEQSPVKQVKR 166
Query: 524 NVPSSVTDVALPALLDSDEERM 545
VP VA L+ +EE +
Sbjct: 167 LVPQKQASVAKKKKLEKEEEEI 188
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 30.0 bits (66), Expect = 5.8
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 476 EEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALP 535
EEEEE+E++E +E E + R+ Q GN + +ED +EE V S + + P
Sbjct: 128 EEEEEEEEEEEEEEEEEEEEQPRAGPQGSGGNHEQYSLEEDQA--LEEWVSSETSALPRP 185
>gi|215490093 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform A [Homo sapiens]
Length = 357
Score = 30.0 bits (66), Expect = 5.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 468 RFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQ 514
R P SEEEEE+E+KE +E E + + +P GN+ K Q
Sbjct: 44 RVTVVPKSEEEEEEEEKE---EEEEEEKEEEEGQGQPTGNAWWQKLQ 87
>gi|6912256 ATPase, (Na+)/K+ transporting, beta 4 polypeptide
isoform B [Homo sapiens]
Length = 353
Score = 30.0 bits (66), Expect = 5.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 468 RFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQ 514
R P SEEEEE+E+KE +E E + + +P GN+ K Q
Sbjct: 44 RVTVVPKSEEEEEEEEKE---EEEEEEKEEEEGQGQPTGNAWWQKLQ 87
>gi|54607053 GCN1 general control of amino-acid synthesis 1-like 1
[Homo sapiens]
Length = 2671
Score = 30.0 bits (66), Expect = 5.8
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 91 NEIYNFKAEEVELYL-EKLKEKRGLSGKYQTSSK 123
N+ Y+FK + +EL L E++K+K+G+ + Q +SK
Sbjct: 796 NKAYSFKEQIIELELKEEIKKKKGIKEEVQLTSK 829
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,618,173
Number of Sequences: 37866
Number of extensions: 852542
Number of successful extensions: 4267
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4144
Number of HSP's gapped (non-prelim): 108
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.