Guide to the Human Genome
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Name: TMEM102 Sequence: fasta or formatted (508aa) NCBI GI: 30425460
Description:

transmembrane protein 102

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.8         70           3
 C cysteine            2.2         11           2
 D aspartate           4.5         23           2
 E glutamate           6.3         32           2
 F phenylalanine       2.6         13           2
 G glycine             8.5         43           3
 H histidine           2.6         13           1
 I isoleucine          1.6          8           1
 K lysine              2.0         10           1
 L leucine            13.6         69           4
 M methionine          1.0          5           1
 N asparagine          0.4          2           1
 P proline             9.6         49           4
 Q glutamine           3.5         18           1
 R arginine            6.5         33           2
 S serine              7.3         37           2
 T threonine           3.9         20           2
 V valine              6.1         31           2
 W tryptophan          2.4         12           2
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 102 
C3orf59               0.109   hypothetical protein LOC151963 
SP5                   0.015   Sp5 transcription factor 
LOC100292328          0.009   PREDICTED: hypothetical protein 
LOC100287025          0.009   PREDICTED: hypothetical protein 
LOC100287025          0.009   PREDICTED: hypothetical protein XP_002344222 
FGFRL1                0.008   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.008   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.008   fibroblast growth factor receptor-like 1 precursor [...
LOC147645             0.007   PREDICTED: hypothetical protein 
LOC147645             0.007   PREDICTED: hypothetical protein 
LOC147645             0.007   PREDICTED: hypothetical protein 
MAB21L2               0.007   mab-21-like protein 2 
WDR70                 0.007   WD repeat domain 70 
VCX3A                 0.006   variable charge, X-linked 3A 
VCX3B                 0.006   variable charge, X-linked 3B 
CHEK2                 0.006   protein kinase CHK2 isoform c 
CHEK2                 0.006   protein kinase CHK2 isoform b 
CHEK2                 0.006   protein kinase CHK2 isoform a 
LOC100294444          0.006   PREDICTED: similar to family with sequence similari...
LOC729737             0.006   PREDICTED: hypothetical protein 
TACC1                 0.006   transforming, acidic coiled-coil containing protein...
GLYAT                 0.006   glycine-N-acyltransferase isoform a 
ZNF828                0.006   zinc finger protein 828 
FAM48B2               0.006   family with sequence similarity 48, member B2 [Homo...
MAB21L1               0.005   mab-21-like protein 1 
ZYG11A                0.005   PREDICTED: zyg-11 homolog A (C. elegans) 
LOC100290612          0.005   PREDICTED: hypothetical protein XP_002348127 
ZYG11A                0.005   PREDICTED: zyg-11 homolog A (C. elegans) 
BNIP2                 0.005   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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