Guide to the Human Genome
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Name: MAB21L2 Sequence: fasta or formatted (359aa) NCBI GI: 5453730
Description:

mab-21-like protein 2

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         26           2
 C cysteine            3.6         13           1
 D aspartate           4.2         15           2
 E glutamate           7.2         26           1
 F phenylalanine       3.1         11           1
 G glycine             4.7         17           2
 H histidine           1.7          6           1
 I isoleucine          4.5         16           1
 K lysine              6.7         24           1
 L leucine            12.0         43           3
 M methionine          1.9          7           1
 N asparagine          3.3         12           2
 P proline             4.7         17           1
 Q glutamine           4.5         16           1
 R arginine            7.2         26           2
 S serine              7.2         26           2
 T threonine           3.9         14           1
 V valine              7.0         25           2
 W tryptophan          1.9          7           1
 Y tyrosine            3.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mab-21-like protein 2 
MAB21L1               0.953   mab-21-like protein 1 
C1orf161              0.106   hypothetical protein LOC126868 
C6orf150              0.074   hypothetical protein LOC115004 
C3orf59               0.043   hypothetical protein LOC151963 
ITPRIPL1              0.027   inositol 1,4,5-triphosphate receptor interacting pro...
ITPRIPL1              0.027   inositol 1,4,5-triphosphate receptor interacting pro...
ITPRIP                0.027   inositol 1,4,5-triphosphate receptor interacting pro...
C2orf54               0.023   hypothetical protein LOC79919 isoform 1 
ITPRIPL2              0.017   inositol 1,4,5-triphosphate receptor interacting pro...
C2orf54               0.016   hypothetical protein LOC79919 isoform 2 
SMCR7L                0.014   hypothetical protein LOC54471 
TMEM102               0.010   transmembrane protein 102 
SMCR7                 0.007   Smith-Magenis syndrome chromosome region, candidate...
SMCR7                 0.007   Smith-Magenis syndrome chromosome region, candidate ...
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform a 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform d 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform c 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform b 
IRGC                  0.006   immunity-related GTPase family, cinema 
SNX18                 0.006   sorting nexin 18 isoform c 
SNX18                 0.006   sorting nexin 18 isoform b 
ASCC3                 0.006   activating signal cointegrator 1 complex subunit 3 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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