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Search of human proteins with 30425428
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30425428 deltex homolog 3 [Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30425428 deltex homolog 3 [Homo sapiens] 727 0.0
gi|19923717 deltex 3-like [Homo sapiens] 220 2e-57
gi|156564384 deltex 2 isoform a [Homo sapiens] 151 7e-37
gi|156564382 deltex 2 isoform a [Homo sapiens] 151 7e-37
gi|156564380 deltex 2 isoform a [Homo sapiens] 151 7e-37
gi|156564386 deltex 2 isoform b [Homo sapiens] 151 9e-37
gi|148237498 deltex 4 homolog [Homo sapiens] 124 1e-28
gi|41352718 deltex homolog 1 [Homo sapiens] 120 2e-27
gi|33188449 serine/arginine-rich protein-specific kinase 2 isofo... 55 1e-07
gi|33188447 serine/arginine-rich protein-specific kinase 2 isofo... 52 8e-07
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 52 8e-07
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 52 8e-07
gi|109240538 polycomb group ring finger 1 [Homo sapiens] 50 4e-06
gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens] 49 5e-06
gi|25777716 ring finger protein 39 isoform 2 [Homo sapiens] 49 5e-06
gi|51479192 ring finger protein 1 [Homo sapiens] 49 9e-06
gi|6005964 ring finger protein 110 [Homo sapiens] 49 9e-06
gi|6005747 ring finger protein 2 [Homo sapiens] 47 3e-05
gi|4758216 dishevelled 2 [Homo sapiens] 46 4e-05
gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens] 46 4e-05
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 46 4e-05
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 46 4e-05
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 46 6e-05
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 46 6e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 7e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 7e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 45 7e-05
gi|150417989 cyclin K isoform 1 [Homo sapiens] 45 1e-04
gi|30520320 ring finger protein 166 [Homo sapiens] 45 1e-04
gi|31742478 ring finger protein 3 [Homo sapiens] 45 1e-04
>gi|30425428 deltex homolog 3 [Homo sapiens]
Length = 347
Score = 727 bits (1876), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MSFVLSRMAACGGTCKNKVTVSKPVWDFLSKETPARLARLREEHRVSILIDGETSDIYVL 60
MSFVLSRMAACGGTCKNKVTVSKPVWDFLSKETPARLARLREEHRVSILIDGETSDIYVL
Sbjct: 1 MSFVLSRMAACGGTCKNKVTVSKPVWDFLSKETPARLARLREEHRVSILIDGETSDIYVL 60
Query: 61 QLSPQGPPPAPPNGLYLARKALKGLLKEAEKELKKAQRQGELMGCLALGGGGEHPEMHRA 120
QLSPQGPPPAPPNGLYLARKALKGLLKEAEKELKKAQRQGELMGCLALGGGGEHPEMHRA
Sbjct: 61 QLSPQGPPPAPPNGLYLARKALKGLLKEAEKELKKAQRQGELMGCLALGGGGEHPEMHRA 120
Query: 121 GPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKC 180
GPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKC
Sbjct: 121 GPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKC 180
Query: 181 RHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLLLPSYEKYGTIVI 240
RHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLLLPSYEKYGTIVI
Sbjct: 181 RHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLLLPSYEKYGTIVI 240
Query: 241 QYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTT 300
QYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTT
Sbjct: 241 QYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTT 300
Query: 301 GRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 347
GRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD
Sbjct: 301 GRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 347
>gi|19923717 deltex 3-like [Homo sapiens]
Length = 740
Score = 220 bits (560), Expect = 2e-57
Identities = 109/203 (53%), Positives = 132/203 (65%), Gaps = 8/203 (3%)
Query: 147 PPLPPRLREEAEE----QESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
PPL + EA E ++ C IC+ I N K L KC+H FC CI +A+ K CP C
Sbjct: 540 PPLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTC 599
Query: 203 GRFYGQLVGNQPQNGRML-VSKDATLLLPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP 261
YG GNQP+ + VS+D+ LP YE +GTIVI Y G+Q EHPNPG RYP
Sbjct: 600 QTSYGIQKGNQPEGSMVFTVSRDS---LPGYESFGTIVITYSMKAGIQTEEHPNPGKRYP 656
Query: 262 GTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGP 321
G R AYLPD EG KVL L +AFDQ+L FT+G S G +VITWNDIHHKTS GGP
Sbjct: 657 GIQRTAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGP 716
Query: 322 QLFGYPDPTYLTRVQEELRAKGI 344
+++GYPDP+YL RV+EEL+AKGI
Sbjct: 717 EMYGYPDPSYLKRVKEELKAKGI 739
>gi|156564384 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 151 bits (382), Expect = 7e-37
Identities = 93/241 (38%), Positives = 121/241 (50%), Gaps = 35/241 (14%)
Query: 136 RGLPPPPPPLPPPLPPRLREEAE-EQESTCPICLGEIQNAKT-----------------L 177
+G P P P P + EE + + C IC+ ++ A L
Sbjct: 383 KGATPKPEPEPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHL 442
Query: 178 EKCRHSF---------CEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLL 228
KC H+F C G +LQ CP C YG+ G QPQ G+M V + +
Sbjct: 443 TKCSHAFHLLCLLAMYCNGNKDGSLQ----CPSCKTIYGEKTGTQPQ-GKMEVLR-FQMS 496
Query: 229 LPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP--GTTRVAYLPDCPEGNKVLTLFRKAF 286
LP +E GTI+I Y P G+QG EHPNPG + G R YLPD +G KVL L + A+
Sbjct: 497 LPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAW 556
Query: 287 DQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITD 346
+RL FT+GTS TTG + + WN+IHHKT GYPDP YL V EL A+G+T+
Sbjct: 557 KRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTE 616
Query: 347 D 347
D
Sbjct: 617 D 617
>gi|156564382 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 151 bits (382), Expect = 7e-37
Identities = 93/241 (38%), Positives = 121/241 (50%), Gaps = 35/241 (14%)
Query: 136 RGLPPPPPPLPPPLPPRLREEAE-EQESTCPICLGEIQNAKT-----------------L 177
+G P P P P + EE + + C IC+ ++ A L
Sbjct: 383 KGATPKPEPEPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHL 442
Query: 178 EKCRHSF---------CEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLL 228
KC H+F C G +LQ CP C YG+ G QPQ G+M V + +
Sbjct: 443 TKCSHAFHLLCLLAMYCNGNKDGSLQ----CPSCKTIYGEKTGTQPQ-GKMEVLR-FQMS 496
Query: 229 LPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP--GTTRVAYLPDCPEGNKVLTLFRKAF 286
LP +E GTI+I Y P G+QG EHPNPG + G R YLPD +G KVL L + A+
Sbjct: 497 LPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAW 556
Query: 287 DQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITD 346
+RL FT+GTS TTG + + WN+IHHKT GYPDP YL V EL A+G+T+
Sbjct: 557 KRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTE 616
Query: 347 D 347
D
Sbjct: 617 D 617
>gi|156564380 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 151 bits (382), Expect = 7e-37
Identities = 93/241 (38%), Positives = 121/241 (50%), Gaps = 35/241 (14%)
Query: 136 RGLPPPPPPLPPPLPPRLREEAE-EQESTCPICLGEIQNAKT-----------------L 177
+G P P P P + EE + + C IC+ ++ A L
Sbjct: 383 KGATPKPEPEPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHL 442
Query: 178 EKCRHSF---------CEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRMLVSKDATLL 228
KC H+F C G +LQ CP C YG+ G QPQ G+M V + +
Sbjct: 443 TKCSHAFHLLCLLAMYCNGNKDGSLQ----CPSCKTIYGEKTGTQPQ-GKMEVLR-FQMS 496
Query: 229 LPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP--GTTRVAYLPDCPEGNKVLTLFRKAF 286
LP +E GTI+I Y P G+QG EHPNPG + G R YLPD +G KVL L + A+
Sbjct: 497 LPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAW 556
Query: 287 DQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITD 346
+RL FT+GTS TTG + + WN+IHHKT GYPDP YL V EL A+G+T+
Sbjct: 557 KRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTE 616
Query: 347 D 347
D
Sbjct: 617 D 617
>gi|156564386 deltex 2 isoform b [Homo sapiens]
Length = 575
Score = 151 bits (381), Expect = 9e-37
Identities = 97/255 (38%), Positives = 124/255 (48%), Gaps = 39/255 (15%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAE-EQESTCPICLGEIQNAKT---- 176
P P R L G P P P P + EE + + C IC+ ++ A
Sbjct: 326 PKPSRVQQALA----GATPKPEPEPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDV 381
Query: 177 -------------LEKCRHSF---------CEGCITRALQVKKACPMCGRFYGQLVGNQP 214
L KC H+F C G +LQ CP C YG+ G QP
Sbjct: 382 TDSKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSLQ----CPSCKTIYGEKTGTQP 437
Query: 215 QNGRMLVSKDATLLLPSYEKYGTIVIQYVFPPGVQGAEHPNPGVRYP--GTTRVAYLPDC 272
Q G+M V + + LP +E GTI+I Y P G+QG EHPNPG + G R YLPD
Sbjct: 438 Q-GKMEVLR-FQMSLPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQCYLPDN 495
Query: 273 PEGNKVLTLFRKAFDQRLTFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYL 332
+G KVL L + A+ +RL FT+GTS TTG + + WN+IHHKT GYPDP YL
Sbjct: 496 AQGRKVLELLKVAWKRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYL 555
Query: 333 TRVQEELRAKGITDD 347
V EL A+G+T+D
Sbjct: 556 QNVLAELAAQGVTED 570
>gi|148237498 deltex 4 homolog [Homo sapiens]
Length = 619
Score = 124 bits (312), Expect = 1e-28
Identities = 70/154 (45%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 199 CPMCGRFYGQLVGNQPQNGRM---LVSKDATLLLPSYEKYGTIVIQYVFPPGVQGAEHPN 255
CP C YG G QP G+M L+ LP + TI I Y PPG+QG EHPN
Sbjct: 464 CPTCKTIYGVKTGTQPP-GKMEYHLIPHS----LPGHPDCKTIRIIYSIPPGIQGPEHPN 518
Query: 256 PGVRYP--GTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTTGRPNVITWNDIHH 313
PG + G R YLPD +G KVL L A+D+RL F IGTS TTG + + WN++HH
Sbjct: 519 PGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHH 578
Query: 314 KTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 347
KT GYPD YL V EL A+GI++D
Sbjct: 579 KTEFGSNLTGHGYPDANYLDNVLAELAAQGISED 612
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 120 bits (301), Expect = 2e-27
Identities = 67/153 (43%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 199 CPMCGRFYGQLVGNQPQNGRM---LVSKDATLLLPSYEKYGTIVIQYVFPPGVQGAEHPN 255
CP C YG+ G QP G+M L+ LP + TI I Y P G+QG EHPN
Sbjct: 468 CPTCKAIYGEKTGTQPP-GKMEFHLIPHS----LPGFPDTQTIRIVYDIPTGIQGPEHPN 522
Query: 256 PGVRYP--GTTRVAYLPDCPEGNKVLTLFRKAFDQRLTFTIGTSMTTGRPNVITWNDIHH 313
PG ++ G R YLP+ +G KVL L A+++RL FTIGTS TTG + + WN+IHH
Sbjct: 523 PGKKFTARGFPRHCYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHH 582
Query: 314 KTSCTGGPQLFGYPDPTYLTRVQEELRAKGITD 346
KT GYPD +YL V EL A+G+++
Sbjct: 583 KTEFGSNLTGHGYPDASYLDNVLAELTAQGVSE 615
Score = 29.3 bits (64), Expect = 5.4
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
Query: 126 RAAPLLPPGARGLPPPPPPLPPP 148
R AP PP LPPPPPP PP
Sbjct: 224 RKAPPAPP----LPPPPPPGGPP 242
Score = 28.9 bits (63), Expect = 7.1
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 140 PPPPPLPPPLPP 151
PP PPLPPP PP
Sbjct: 227 PPAPPLPPPPPP 238
>gi|33188449 serine/arginine-rich protein-specific kinase 2 isoform
a [Homo sapiens]
Length = 699
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 116 EMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEA-----EEQESTCPICLG 169
E H P P + APL+PP PPPPPPLP P PP EE EEQE C G
Sbjct: 19 EKHPKKPEPQQKAPLVPPPPPPPPPPPPPLPDPTPPEPEEEILGSDDEEQEDPADYCKG 77
>gi|33188447 serine/arginine-rich protein-specific kinase 2 isoform
b [Homo sapiens]
Length = 688
Score = 52.0 bits (123), Expect = 8e-07
Identities = 26/53 (49%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEA-----EEQESTCPICLG 169
P P + APL+PP PPPPPPLP P PP EE EEQE C G
Sbjct: 14 PEPQQKAPLVPPPPPPPPPPPPPLPDPTPPEPEEEILGSDDEEQEDPADYCKG 66
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 52.0 bits (123), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 86 LKEAEKELKKAQRQGELMGCLA-LGGGGEHPEMHRAGPPPLRAAPLLPPGARGLPPPPPP 144
+KE E E+++ + Q +++ + + G P + GPPP AP LP GA LPPPPPP
Sbjct: 525 IKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGA-PLPPPPPP 583
Query: 145 L------PPPLPPRL 153
L PPP PP L
Sbjct: 584 LPGMMGIPPPPPPPL 598
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 52.0 bits (123), Expect = 8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 86 LKEAEKELKKAQRQGELMGCLA-LGGGGEHPEMHRAGPPPLRAAPLLPPGARGLPPPPPP 144
+KE E E+++ + Q +++ + + G P + GPPP AP LP GA LPPPPPP
Sbjct: 525 IKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGA-PLPPPPPP 583
Query: 145 L------PPPLPPRL 153
L PPP PP L
Sbjct: 584 LPGMMGIPPPPPPPL 598
>gi|109240538 polycomb group ring finger 1 [Homo sapiens]
Length = 259
Score = 49.7 bits (117), Expect = 4e-06
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 152 RLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
R++ + + C +C G +A T+ +C H+FC+ CI + LQ K CPMC
Sbjct: 35 RVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMC 85
>gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens]
Length = 420
Score = 49.3 bits (116), Expect = 5e-06
Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 75 LYLARKALKGLLKEAEKELKKAQRQGELMGCLALGGGGEHPEMHRAGPPPLR--AAPLLP 132
L+L R+A+ G E +KA + +G G + R GPP R A ++
Sbjct: 11 LWLKREAIPG-------EGRKAAKVNA-----GVGEKGIYTASSRGGPPSARSKAVTVVA 58
Query: 133 PGARG---LPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCI 189
GA L P L P L RL EQ +TCP+C G ++ L C HSFC C+
Sbjct: 59 EGAASRSWLSMDAPELGPGLVERL-----EQLATCPLCGGSFEDPVLLA-CEHSFCRACL 112
Query: 190 TRALQV---------KKACPMCG 203
R ACP CG
Sbjct: 113 ARRWGTPPATGTEASPTACPCCG 135
>gi|25777716 ring finger protein 39 isoform 2 [Homo sapiens]
Length = 354
Score = 49.3 bits (116), Expect = 5e-06
Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 75 LYLARKALKGLLKEAEKELKKAQRQGELMGCLALGGGGEHPEMHRAGPPPLR--AAPLLP 132
L+L R+A+ G E +KA + +G G + R GPP R A ++
Sbjct: 11 LWLKREAIPG-------EGRKAAKVNA-----GVGEKGIYTASSRGGPPSARSKAVTVVA 58
Query: 133 PGARG---LPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCI 189
GA L P L P L RL EQ +TCP+C G ++ L C HSFC C+
Sbjct: 59 EGAASRSWLSMDAPELGPGLVERL-----EQLATCPLCGGSFEDPVLLA-CEHSFCRACL 112
Query: 190 TRALQV---------KKACPMCG 203
R ACP CG
Sbjct: 113 ARRWGTPPATGTEASPTACPCCG 135
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 48.5 bits (114), Expect = 9e-06
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 161 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGRFYGQLVGNQPQ-NGR 218
E CPICL ++N T ++C H FC CI AL+ K CP C + +P N
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 219 MLVSKDATLLLPSYEKY 235
L+SK + PS E+Y
Sbjct: 105 ALISK----IYPSREEY 117
>gi|6005964 ring finger protein 110 [Homo sapiens]
Length = 344
Score = 48.5 bits (114), Expect = 9e-06
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
C +C G +A T+ +C HSFC+ CI R L+ K CPMC
Sbjct: 18 CALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMC 56
>gi|6005747 ring finger protein 2 [Homo sapiens]
Length = 336
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 161 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGRFYGQLVGNQPQ-NGR 218
E CPICL ++N T ++C H FC CI AL+ K CP C + +P N
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 219 MLVSKDATLLLPSYEKY 235
L+SK + PS ++Y
Sbjct: 108 ALISK----IYPSRDEY 120
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 46.2 bits (108), Expect = 4e-05
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 114 HPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPP 151
HP +H GPPP A P P +PPPPPP+PP + P
Sbjct: 661 HPGLHPYGPPPGMALPYNPMMVVMMPPPPPPVPPAVQP 698
Score = 30.4 bits (67), Expect = 2.4
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLPPPLPP 151
P P A P+ P A L PP PPL PPLPP
Sbjct: 95 PQPEMAPPVHEPRAE-LAPPAPPL-PPLPP 122
>gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens]
Length = 326
Score = 46.2 bits (108), Expect = 4e-05
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 164 CPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
C +C G +A T+ +C HSFC+ CI R L+ K CP+C
Sbjct: 18 CVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPIC 56
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 46.2 bits (108), Expect = 4e-05
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 161 ESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
+S CPICL N L++C H FC C+ + K CP+C
Sbjct: 100 DSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLC 141
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 46.2 bits (108), Expect = 4e-05
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLPPPLPPR------LREEAEEQES 162
PPP P PP ++ LPPPPPP PPPLP + + E ++QES
Sbjct: 422 PPPPPPPPPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQES 468
Score = 34.7 bits (78), Expect = 0.13
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 125 LRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
+R+ PL P PPPPPP PPP RL
Sbjct: 410 VRSRPLSPVATPPPPPPPPPPPPPSSQRL 438
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 45.8 bits (107), Expect = 6e-05
Identities = 21/33 (63%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLP---PPLPP 151
PPP PL PP A LPPPPPPLP PP PP
Sbjct: 459 PPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAPP 491
Score = 28.9 bits (63), Expect = 7.1
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 82 LKGLLKEAEKEL-KKAQRQGELMGCLALGGGGEHPEMHRAGPPPLRAAPLLPPGARGL-- 138
L+ L+KE E+ ++ + + G ++ + + R GP L +PP L
Sbjct: 403 LRRLIKEKEEAFQRRCHLEPNVRGLESV----DSEALARVGPAELSEG--MPPSDLDLLA 456
Query: 139 PPPPP----PLPPPLPPRLREEAEEQESTCP 165
P PPP PLPPP P L CP
Sbjct: 457 PAPPPEEVLPLPPPPAPPLPPPPPPLPDKCP 487
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 45.8 bits (107), Expect = 6e-05
Identities = 21/33 (63%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLP---PPLPP 151
PPP PL PP A LPPPPPPLP PP PP
Sbjct: 510 PPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAPP 542
Score = 28.9 bits (63), Expect = 7.1
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 82 LKGLLKEAEKEL-KKAQRQGELMGCLALGGGGEHPEMHRAGPPPLRAAPLLPPGARGL-- 138
L+ L+KE E+ ++ + + G ++ + + R GP L +PP L
Sbjct: 454 LRRLIKEKEEAFQRRCHLEPNVRGLESV----DSEALARVGPAELSEG--MPPSDLDLLA 507
Query: 139 PPPPP----PLPPPLPPRLREEAEEQESTCP 165
P PPP PLPPP P L CP
Sbjct: 508 PAPPPEEVLPLPPPPAPPLPPPPPPLPDKCP 538
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 7e-05
Identities = 22/33 (66%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 119 RAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPP 151
RAG PP AP LPP A LPPP PPLPP PP
Sbjct: 386 RAGTPP--PAPPLPPPAPPLPPPAPPLPPAAPP 416
Score = 33.5 bits (75), Expect = 0.29
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 115 PEMHRAGPPPLRAAPLLP---------PGARGLPPPPPPLPPPLPP 151
P + PP ++P +P P L PPPPP+P P PP
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPP 237
Score = 32.3 bits (72), Expect = 0.64
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 110 GGGEHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GG P PPP PLL PPPPP + PP PP L
Sbjct: 159 GGSPLPSPPSTAPPP---PPLLLE-----PPPPPSMAPPPPPVL 194
Score = 32.3 bits (72), Expect = 0.64
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLP 146
PPP AP LPP A LPP PPLP
Sbjct: 397 PPP---APPLPPPAPPLPPAAPPLP 418
Score = 30.4 bits (67), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 121 GPP-----PLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GPP P +PL P + PPPP L PP PP +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSM 186
Score = 29.3 bits (64), Expect = 5.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 10/40 (25%)
Query: 122 PPPLRAAPLLPPGARGLPPP----------PPPLPPPLPP 151
PPP AP PP L PP PP PP PP
Sbjct: 181 PPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPP 220
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 7e-05
Identities = 22/33 (66%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 119 RAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPP 151
RAG PP AP LPP A LPPP PPLPP PP
Sbjct: 386 RAGTPP--PAPPLPPPAPPLPPPAPPLPPAAPP 416
Score = 33.5 bits (75), Expect = 0.29
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 115 PEMHRAGPPPLRAAPLLP---------PGARGLPPPPPPLPPPLPP 151
P + PP ++P +P P L PPPPP+P P PP
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPP 237
Score = 32.3 bits (72), Expect = 0.64
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 110 GGGEHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GG P PPP PLL PPPPP + PP PP L
Sbjct: 159 GGSPLPSPPSTAPPP---PPLLLE-----PPPPPSMAPPPPPVL 194
Score = 32.3 bits (72), Expect = 0.64
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLP 146
PPP AP LPP A LPP PPLP
Sbjct: 397 PPP---APPLPPPAPPLPPAAPPLP 418
Score = 30.4 bits (67), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 121 GPP-----PLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GPP P +PL P + PPPP L PP PP +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSM 186
Score = 29.3 bits (64), Expect = 5.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 10/40 (25%)
Query: 122 PPPLRAAPLLPPGARGLPPP----------PPPLPPPLPP 151
PPP AP PP L PP PP PP PP
Sbjct: 181 PPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPP 220
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 7e-05
Identities = 22/33 (66%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 119 RAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPP 151
RAG PP AP LPP A LPPP PPLPP PP
Sbjct: 386 RAGTPP--PAPPLPPPAPPLPPPAPPLPPAAPP 416
Score = 33.5 bits (75), Expect = 0.29
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 115 PEMHRAGPPPLRAAPLLP---------PGARGLPPPPPPLPPPLPP 151
P + PP ++P +P P L PPPPP+P P PP
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPP 237
Score = 32.3 bits (72), Expect = 0.64
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 110 GGGEHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GG P PPP PLL PPPPP + PP PP L
Sbjct: 159 GGSPLPSPPSTAPPP---PPLLLE-----PPPPPSMAPPPPPVL 194
Score = 32.3 bits (72), Expect = 0.64
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 122 PPPLRAAPLLPPGARGLPPPPPPLP 146
PPP AP LPP A LPP PPLP
Sbjct: 397 PPP---APPLPPPAPPLPPAAPPLP 418
Score = 30.4 bits (67), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 121 GPP-----PLRAAPLLPPGARGLPPPPPPLPPPLPPRL 153
GPP P +PL P + PPPP L PP PP +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSM 186
Score = 29.3 bits (64), Expect = 5.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 10/40 (25%)
Query: 122 PPPLRAAPLLPPGARGLPPP----------PPPLPPPLPP 151
PPP AP PP L PP PP PP PP
Sbjct: 181 PPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPP 220
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 45.1 bits (105), Expect = 1e-04
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 18/108 (16%)
Query: 64 PQGPPPAPPNGLYLARKALKGLLK-EAEKELKKAQR-QGELMGCLALGGGGE-----HPE 116
P PPP PP+ + E + L+ + +G G L G HP
Sbjct: 417 PHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPH 476
Query: 117 MHRAGPPPLRAAP--------LLPPGARGLPPPPP---PLPPPLPPRL 153
++ PPP P +PP G PPPPP P PP PPRL
Sbjct: 477 VYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRL 524
Score = 37.4 bits (85), Expect = 0.020
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Query: 123 PPLRAAPLLPPGARGLPP--------PP---PPLPPPLPP 151
PP A P PP GLPP PP PP+PPP+PP
Sbjct: 525 PPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPP 564
Score = 34.3 bits (77), Expect = 0.17
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 114 HPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPP-LPP 151
HP PP P +PPG + P PPP+PPP +PP
Sbjct: 533 HPPPGLGLPPASYPPPAVPPGGQP--PVPPPIPPPGMPP 569
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 19/58 (32%)
Query: 114 HPEMHRAGPPPLRAAPLL-------PPGARG--------LPPPPPPL----PPPLPPR 152
HP + A PPP R PL PPG +PPP P PPPLP R
Sbjct: 362 HPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHR 419
Score = 28.5 bits (62), Expect = 9.3
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 122 PPPLRAAPLLPPGARGLPP--PPPPLPPP---LPP 151
PPP P PP LPP PP PPP LPP
Sbjct: 508 PPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPP 542
>gi|30520320 ring finger protein 166 [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 1e-04
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 147 PPLPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
PP P + E + TCPICL + C H+FC C+ LQV CP+C
Sbjct: 16 PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLC 72
>gi|31742478 ring finger protein 3 [Homo sapiens]
Length = 242
Score = 44.7 bits (104), Expect = 1e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 163 TCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
TC +C G + +A T+ +C H+FC C+ + L+ CP C
Sbjct: 16 TCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTC 55
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.139 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,607,611
Number of Sequences: 37866
Number of extensions: 1166657
Number of successful extensions: 25441
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 765
Number of HSP's that attempted gapping in prelim test: 11768
Number of HSP's gapped (non-prelim): 8521
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.