Search of human proteins with 30102948

Search of human proteins with 30102948

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30102948 hyaluronan and proteoglycan link protein 3 [Homo
sapiens]
         (360 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30102948 hyaluronan and proteoglycan link protein 3 [Homo sap...   765   0.0  
gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo sapi...   375   e-104
gi|30794472 hyaluronan and proteoglycan link protein 4 [Homo sap...   341   5e-94
gi|11141887 brain link protein-1 [Homo sapiens]                       335   5e-92
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]        234   1e-61
gi|38372931 brevican isoform 2 [Homo sapiens]                         233   3e-61
gi|38372935 brevican isoform 1 [Homo sapiens]                         233   3e-61
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]              224   7e-59
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]              224   7e-59
gi|187607300 versican isoform 2 [Homo sapiens]                        217   1e-56
gi|21361116 versican isoform 1 [Homo sapiens]                         216   2e-56
gi|61743980 stabilin 2 precursor [Homo sapiens]                        74   2e-13
gi|61743978 stabilin 1 precursor [Homo sapiens]                        71   1e-12
gi|26051243 tumor necrosis factor, alpha-induced protein 6 precu...    69   9e-12
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho...    51   2e-06
gi|40549451 lymphatic vessel endothelial hyaluronan receptor 1 [...    50   3e-06
gi|6005958 V-set and immunoglobulin domain containing 4 isoform ...    47   2e-05
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]     47   3e-05
gi|154426280 V-set and immunoglobulin domain containing 4 isofor...    46   5e-05
gi|61966777 V-set and immunoglobulin domain containing 8 [Homo s...    39   0.006
gi|19743898 receptor tyrosine kinase-like orphan receptor 2 prec...    38   0.012
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]     37   0.021
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]     37   0.021
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]     37   0.021
gi|63054855 erythroblast membrane-associated protein precursor [...    37   0.027
gi|19923536 erythroblast membrane-associated protein precursor [...    37   0.027
gi|226437599 V-set and transmembrane domain containing 2B [Homo ...    37   0.036
gi|239757226 PREDICTED: V-set and transmembrane domain containin...    37   0.036
gi|239751732 PREDICTED: V-set and transmembrane domain containin...    37   0.036
gi|239746233 PREDICTED: V-set and transmembrane domain containin...    37   0.036

>gi|30102948 hyaluronan and proteoglycan link protein 3 [Homo
           sapiens]
          Length = 360

 Score =  765 bits (1976), Expect = 0.0
 Identities = 360/360 (100%), Positives = 360/360 (100%)

Query: 1   MGLLLLVPLLLLPGSYGLPFYNGFYYSNSANDQNLGNGHGKDLLNGVKLVVETPEETLFT 60
           MGLLLLVPLLLLPGSYGLPFYNGFYYSNSANDQNLGNGHGKDLLNGVKLVVETPEETLFT
Sbjct: 1   MGLLLLVPLLLLPGSYGLPFYNGFYYSNSANDQNLGNGHGKDLLNGVKLVVETPEETLFT 60

Query: 61  YQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGRVH 120
           YQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGRVH
Sbjct: 61  YQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGRVH 120

Query: 121 LRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGRYQFN 180
           LRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGRYQFN
Sbjct: 121 LRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGRYQFN 180

Query: 181 FHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGGPGLAP 240
           FHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGGPGLAP
Sbjct: 181 FHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGGPGLAP 240

Query: 241 GVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAKVGQLF 300
           GVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAKVGQLF
Sbjct: 241 GVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAKVGQLF 300

Query: 301 AAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSFGFPDPQSRLYGVYCYRQH 360
           AAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSFGFPDPQSRLYGVYCYRQH
Sbjct: 301 AAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSFGFPDPQSRLYGVYCYRQH 360


>gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo
           sapiens]
          Length = 354

 Score =  375 bits (963), Expect = e-104
 Identities = 175/318 (55%), Positives = 220/318 (69%), Gaps = 2/318 (0%)

Query: 45  NGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSP--RRVRVKWWKLSENGAPEKDVL 102
           NG  L+VE  +  +F+++G +V LPC++  +P        ++R+KW KL+ +   E DV 
Sbjct: 36  NGPHLLVEAEQAKVFSHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVF 95

Query: 103 VAIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELE 162
           V++G   +++G YQGRV L+   + D SL I DL LEDYGRY+CEVI+GLED++ +V L+
Sbjct: 96  VSMGYHKKTYGGYQGRVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALD 155

Query: 163 LRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATV 222
           L+GVVFPY    GRY  NFHE QQ C +Q AV+ASF+QL+ AW  GLDWCNAGWL D +V
Sbjct: 156 LQGVVFPYFPRLGRYNLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSV 215

Query: 223 QYPIMLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEA 282
           QYPI  PR+PCGG    PGVR+YG   +   RYDVFCF +   GR YYL HP KLT  EA
Sbjct: 216 QYPITKPREPCGGQNTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEA 275

Query: 283 REACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF 342
            +AC  D A IAKVGQ+FAAWK  G DRCDAGWLADGSVRYP+  P   C P E  VR  
Sbjct: 276 VQACLNDGAQIAKVGQIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFV 335

Query: 343 GFPDPQSRLYGVYCYRQH 360
           GFPD + +LYGVYC+R +
Sbjct: 336 GFPDKKHKLYGVYCFRAY 353


>gi|30794472 hyaluronan and proteoglycan link protein 4 [Homo
           sapiens]
          Length = 402

 Score =  341 bits (875), Expect = 5e-94
 Identities = 164/320 (51%), Positives = 213/320 (66%), Gaps = 11/320 (3%)

Query: 49  LVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLR 108
           +VV+T    + +++G +++LPCRY YE A      VR+KW K+ +  A   DV VA+G +
Sbjct: 47  VVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLA-FTDVFVALGPQ 105

Query: 109 HRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVF 168
           HR+FG Y+GR  L+ D   D SL ++++ L+DYGRY CEV + LED++G+V+L+L GVVF
Sbjct: 106 HRAFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVF 165

Query: 169 PYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIML 228
           PY    GRY+  F E Q+ CAEQ  ++AS EQL  AW +GLDWCNAGWL+D +VQYP+  
Sbjct: 166 PYHPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNR 225

Query: 229 PRQPCGGPG----------LAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLT 278
           PR+PCGG G             G+R+YG RH    RYD FCF + L GRV++L+    + 
Sbjct: 226 PREPCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVP 285

Query: 279 LTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPG 338
            + A  AC    A +AKVGQLFAAWK   LDRC AGWLADGS RYP+V+P   CG   PG
Sbjct: 286 FSGAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPG 345

Query: 339 VRSFGFPDPQSRLYGVYCYR 358
           VRS GFPD   RL+GVYCYR
Sbjct: 346 VRSLGFPDATRRLFGVYCYR 365


>gi|11141887 brain link protein-1 [Homo sapiens]
          Length = 340

 Score =  335 bits (858), Expect = 5e-92
 Identities = 158/306 (51%), Positives = 207/306 (67%), Gaps = 9/306 (2%)

Query: 56  ETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRHRSFGDY 115
           E + +++GA+  LPC         +P   +V+W K+      E  +L+  GL  R +G  
Sbjct: 43  EVIHSHRGATATLPCVLG-----TTPPSYKVRWSKVEPGELRETLILITNGLHARGYGPL 97

Query: 116 QGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNG 175
            GR  +R+    D SL I  +RLED GRYRCE+I+G+EDES  + L L GVVFPYQ   G
Sbjct: 98  GGRARMRRGHRLDASLVIAGVRLEDEGRYRCELINGIEDESVALTLSLEGVVFPYQPSRG 157

Query: 176 RYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGG 235
           RYQFN++E +Q C EQ   +A++ QL++AW EGLDWCNAGWL + +V+YP++  R PCGG
Sbjct: 158 RYQFNYYEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLTARAPCGG 217

Query: 236 PGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAK 295
            G  PG+RSYGPR R   RYD FCF +AL G+V+++  P +LTL+EA  AC+   A +AK
Sbjct: 218 RG-RPGIRSYGPRDRMRDRYDAFCFTSALAGQVFFV--PGRLTLSEAHAACRRRGAVVAK 274

Query: 296 VGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGP-PEPGVRSFGFPDPQSRLYGV 354
           VG L+AAWKF GLD+CD GWLADGSVR+P+  P P CG  P+PGVRSFGFP PQ   YG 
Sbjct: 275 VGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGT 334

Query: 355 YCYRQH 360
           YCY ++
Sbjct: 335 YCYAEN 340


>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
          Length = 1321

 Score =  234 bits (596), Expect = 1e-61
 Identities = 135/308 (43%), Positives = 174/308 (56%), Gaps = 16/308 (5%)

Query: 66  VILPCRYRYEPALVSPRRV-RVKWWKLSENGAPEKD--VLVAIGLRHRSFGDYQGRVHLR 122
           V LPC +  +P   + R   R+KW K+       +D  +LVA     R    +QGRV L 
Sbjct: 55  VALPCLFTLQPRPSAARDAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKSWQGRVSLP 114

Query: 123 Q--DKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGRYQFN 180
               +  + +L +  LR  D G YRC+V+ G+EDE  LV LE+ GVVF Y+S   RY   
Sbjct: 115 SYPRRRANATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRSARDRYALT 174

Query: 181 FHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPC-GGPGLA 239
           F E Q+ C   +A++A+   L  A+E+G D C+AGWL D TV+YPI   R  C G     
Sbjct: 175 FAEAQEACRLSSAIIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSL 234

Query: 240 PGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAKVGQL 299
           PGVRSYG R+ +   YDV+CFA  L G V+Y+    +LTL  AR  C+   A +A VGQL
Sbjct: 235 PGVRSYGRRNPQ-ELYDVYCFARELGGEVFYVGPARRLTLAGARAQCRRQGAALASVGQL 293

Query: 300 FAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDPQSRLY 352
             AW   GLD+CD GWLADGSVRYP+  P   CG P PGVR+        GFP P  R +
Sbjct: 294 HLAW-HEGLDQCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFANRTGFPSPAER-F 351

Query: 353 GVYCYRQH 360
             YC+R H
Sbjct: 352 DAYCFRAH 359


>gi|38372931 brevican isoform 2 [Homo sapiens]
          Length = 671

 Score =  233 bits (593), Expect = 3e-61
 Identities = 141/310 (45%), Positives = 181/310 (58%), Gaps = 19/310 (6%)

Query: 63  GASVILPCRYRYEPALVSPRRV----RVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGR 118
           G ++ +PC   Y     S R V    RVKW  LS     E +VLVA G+R +    Y+ R
Sbjct: 50  GGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR--EAEVLVARGVRVKVNEAYRFR 107

Query: 119 VHLRQDKEH--DVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGR 176
           V L        DVSL + +LR  D G YRCEV  G++D S  VE++++GVVF Y+  + R
Sbjct: 108 VALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSAR 167

Query: 177 YQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPC-GG 235
           Y F+F   Q+ CA   A +A+ EQL+ A+  G + C+AGWL D TV+YPI  PR+ C G 
Sbjct: 168 YAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGD 227

Query: 236 PGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAK 295
               PGVR+YG        YDV+C+A  L G ++  + PEKLTL EAR  CQE  A IA 
Sbjct: 228 MDGFPGVRNYGVVDPD-DLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIAT 286

Query: 296 VGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDPQ 348
            GQL+AAW   GLD C  GWLADGSVRYP+V P   CG   PGV++        GFP+  
Sbjct: 287 TGQLYAAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKH 345

Query: 349 SRLYGVYCYR 358
           SR + VYC+R
Sbjct: 346 SR-FNVYCFR 354


>gi|38372935 brevican isoform 1 [Homo sapiens]
          Length = 911

 Score =  233 bits (593), Expect = 3e-61
 Identities = 141/310 (45%), Positives = 181/310 (58%), Gaps = 19/310 (6%)

Query: 63  GASVILPCRYRYEPALVSPRRV----RVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGR 118
           G ++ +PC   Y     S R V    RVKW  LS     E +VLVA G+R +    Y+ R
Sbjct: 50  GGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR--EAEVLVARGVRVKVNEAYRFR 107

Query: 119 VHLRQDKEH--DVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGR 176
           V L        DVSL + +LR  D G YRCEV  G++D S  VE++++GVVF Y+  + R
Sbjct: 108 VALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSAR 167

Query: 177 YQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPC-GG 235
           Y F+F   Q+ CA   A +A+ EQL+ A+  G + C+AGWL D TV+YPI  PR+ C G 
Sbjct: 168 YAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGD 227

Query: 236 PGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAK 295
               PGVR+YG        YDV+C+A  L G ++  + PEKLTL EAR  CQE  A IA 
Sbjct: 228 MDGFPGVRNYGVVDPD-DLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIAT 286

Query: 296 VGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDPQ 348
            GQL+AAW   GLD C  GWLADGSVRYP+V P   CG   PGV++        GFP+  
Sbjct: 287 TGQLYAAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKH 345

Query: 349 SRLYGVYCYR 358
           SR + VYC+R
Sbjct: 346 SR-FNVYCFR 354


>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
          Length = 2416

 Score =  224 bits (572), Expect = 7e-59
 Identities = 131/313 (41%), Positives = 178/313 (56%), Gaps = 25/313 (7%)

Query: 63  GASVILPCRY--RYEPALVSPRRV----RVKWWKLSENGAPEKDV--LVAIGLRHRSFGD 114
           G S+ +PC +     P   +P       R+KW ++S+    EK+V  LVA   R R    
Sbjct: 44  GTSLTIPCYFIDPMHPVTTAPSTAPLAPRIKWSRVSK----EKEVVLLVATEGRVRVNSA 99

Query: 115 YQGRVHLRQDKE--HDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQS 172
           YQ +V L        D +LE+Q LR  D G YRCEV+ G+ED    +E+ ++G+VF Y++
Sbjct: 100 YQDKVSLPNYPAIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRA 159

Query: 173 PNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQP 232
            + RY  +F   Q+ C + +A++A+ EQL  A+E+G   C+AGWL D TV+YPI  PR+ 
Sbjct: 160 ISTRYTLDFDRAQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREG 219

Query: 233 C-GGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDA 291
           C G     PGVR+YG R      YDV+CFA  ++G V+Y   PEK T  EA   C+   A
Sbjct: 220 CYGDKDEFPGVRTYGIRDTN-ETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGA 278

Query: 292 TIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GF 344
            +A  GQL+ AW+  G+D C AGWLAD SVRYP+    PNCG    GVR+        G+
Sbjct: 279 RLATTGQLYLAWQ-AGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGY 337

Query: 345 PDPQSRLYGVYCY 357
           PDP SR Y   CY
Sbjct: 338 PDPSSR-YDAICY 349



 Score =  192 bits (489), Expect = 3e-49
 Identities = 100/202 (49%), Positives = 127/202 (62%), Gaps = 11/202 (5%)

Query: 165 GVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQY 224
           GVVF Y+    RY   F E QQ C    AV+AS EQL  A+E G + C+AGWL+D TV+Y
Sbjct: 477 GVVFHYRPGPTRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLRDQTVRY 536

Query: 225 PIMLPRQPC-GGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAR 283
           PI+ PR PC G    +PGVR+YG R      YDV+CF   L+G V++    E+ T  EA 
Sbjct: 537 PIVSPRTPCVGDKDSSPGVRTYGVR-PSTETYDVYCFVDRLEGEVFFATRLEQFTFQEAL 595

Query: 284 EACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF- 342
           E C+  +AT+A  GQL+AAW   GLD+C AGWLADGS+RYP+V P P CG  +PGVR+  
Sbjct: 596 EFCESHNATLATTGQLYAAWS-RGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVY 654

Query: 343 ------GFPDPQSRLYGVYCYR 358
                 G PDP SR +  +C+R
Sbjct: 655 LYPNQTGLPDPLSR-HHAFCFR 675


>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
          Length = 2317

 Score =  224 bits (572), Expect = 7e-59
 Identities = 131/313 (41%), Positives = 178/313 (56%), Gaps = 25/313 (7%)

Query: 63  GASVILPCRY--RYEPALVSPRRV----RVKWWKLSENGAPEKDV--LVAIGLRHRSFGD 114
           G S+ +PC +     P   +P       R+KW ++S+    EK+V  LVA   R R    
Sbjct: 44  GTSLTIPCYFIDPMHPVTTAPSTAPLAPRIKWSRVSK----EKEVVLLVATEGRVRVNSA 99

Query: 115 YQGRVHLRQDKE--HDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQS 172
           YQ +V L        D +LE+Q LR  D G YRCEV+ G+ED    +E+ ++G+VF Y++
Sbjct: 100 YQDKVSLPNYPAIPSDATLEVQSLRSNDSGVYRCEVMHGIEDSEATLEVVVKGIVFHYRA 159

Query: 173 PNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQP 232
            + RY  +F   Q+ C + +A++A+ EQL  A+E+G   C+AGWL D TV+YPI  PR+ 
Sbjct: 160 ISTRYTLDFDRAQRACLQNSAIIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREG 219

Query: 233 C-GGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDA 291
           C G     PGVR+YG R      YDV+CFA  ++G V+Y   PEK T  EA   C+   A
Sbjct: 220 CYGDKDEFPGVRTYGIRDTN-ETYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGA 278

Query: 292 TIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GF 344
            +A  GQL+ AW+  G+D C AGWLAD SVRYP+    PNCG    GVR+        G+
Sbjct: 279 RLATTGQLYLAWQ-AGMDMCSAGWLADRSVRYPISKARPNCGGNLLGVRTVYVHANQTGY 337

Query: 345 PDPQSRLYGVYCY 357
           PDP SR Y   CY
Sbjct: 338 PDPSSR-YDAICY 349



 Score =  192 bits (489), Expect = 3e-49
 Identities = 100/202 (49%), Positives = 127/202 (62%), Gaps = 11/202 (5%)

Query: 165 GVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQY 224
           GVVF Y+    RY   F E QQ C    AV+AS EQL  A+E G + C+AGWL+D TV+Y
Sbjct: 477 GVVFHYRPGPTRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLRDQTVRY 536

Query: 225 PIMLPRQPC-GGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAR 283
           PI+ PR PC G    +PGVR+YG R      YDV+CF   L+G V++    E+ T  EA 
Sbjct: 537 PIVSPRTPCVGDKDSSPGVRTYGVR-PSTETYDVYCFVDRLEGEVFFATRLEQFTFQEAL 595

Query: 284 EACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF- 342
           E C+  +AT+A  GQL+AAW   GLD+C AGWLADGS+RYP+V P P CG  +PGVR+  
Sbjct: 596 EFCESHNATLATTGQLYAAWS-RGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVY 654

Query: 343 ------GFPDPQSRLYGVYCYR 358
                 G PDP SR +  +C+R
Sbjct: 655 LYPNQTGLPDPLSR-HHAFCFR 675


>gi|187607300 versican isoform 2 [Homo sapiens]
          Length = 655

 Score =  217 bits (552), Expect = 1e-56
 Identities = 129/312 (41%), Positives = 176/312 (56%), Gaps = 21/312 (6%)

Query: 66  VILPCRYRYEPALV----SPRRVRVKWWKLS--ENGAPEKD--VLVAIGLRHRSFGDYQG 117
           V LPC +   P L     +   +R+KW K+   +NG   K+  VLVA     +   DY+G
Sbjct: 40  VSLPCHFSTMPTLPPSYNTSEFLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKG 99

Query: 118 RVHLRQDKEH--DVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNG 175
           RV +    E   D SL +  L   D G YRC+V+ G+ED    V L + GVVF Y++   
Sbjct: 100 RVSVPTHPEAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATS 159

Query: 176 RYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGG 235
           RY  NF   Q+ C +  AV+A+ EQLF A+E+G + C+AGWL D TV+YPI  PR  C G
Sbjct: 160 RYTLNFEAAQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYG 219

Query: 236 PGLA-PGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIA 294
             +   GVR+YG R  +   YDV+C+   L G V++L  P K T  EA + C+  DA +A
Sbjct: 220 DKMGKAGVRTYGFRSPQ-ETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLA 278

Query: 295 KVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDP 347
            VG+L AAW+ +G D+CD GWL+D SVR+PV      CG    GVR+        GFP P
Sbjct: 279 TVGELQAAWR-NGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPP 337

Query: 348 QSRLYGVYCYRQ 359
            SR +  YC+++
Sbjct: 338 DSR-FDAYCFKR 348


>gi|21361116 versican isoform 1 [Homo sapiens]
          Length = 3396

 Score =  216 bits (551), Expect = 2e-56
 Identities = 129/311 (41%), Positives = 175/311 (56%), Gaps = 21/311 (6%)

Query: 66  VILPCRYRYEPALV----SPRRVRVKWWKLS--ENGAPEKD--VLVAIGLRHRSFGDYQG 117
           V LPC +   P L     +   +R+KW K+   +NG   K+  VLVA     +   DY+G
Sbjct: 40  VSLPCHFSTMPTLPPSYNTSEFLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKG 99

Query: 118 RVHLRQDKEH--DVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNG 175
           RV +    E   D SL +  L   D G YRC+V+ G+ED    V L + GVVF Y++   
Sbjct: 100 RVSVPTHPEAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATS 159

Query: 176 RYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPCGG 235
           RY  NF   Q+ C +  AV+A+ EQLF A+E+G + C+AGWL D TV+YPI  PR  C G
Sbjct: 160 RYTLNFEAAQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLADQTVRYPIRAPRVGCYG 219

Query: 236 PGLA-PGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIA 294
             +   GVR+YG R  +   YDV+C+   L G V++L  P K T  EA + C+  DA +A
Sbjct: 220 DKMGKAGVRTYGFRSPQ-ETYDVYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLA 278

Query: 295 KVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDP 347
            VG+L AAW+ +G D+CD GWL+D SVR+PV      CG    GVR+        GFP P
Sbjct: 279 TVGELQAAWR-NGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPP 337

Query: 348 QSRLYGVYCYR 358
            SR +  YC++
Sbjct: 338 DSR-FDAYCFK 347


>gi|61743980 stabilin 2 precursor [Homo sapiens]
          Length = 2551

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 167  VFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPI 226
            VF  +SP G+Y+  F + ++ CA +AA +A++ QL  A +     C+AGWL+   V YP 
Sbjct: 2199 VFHLRSPLGQYKLTFDKAREACANEAATMATYNQLSYAQKAKYHLCSAGWLETGRVAYPT 2258

Query: 227  MLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCF 260
                Q CG      G+  YGPR  +   +DVFC+
Sbjct: 2259 AFASQNCGSG--VVGIVDYGPRPNKSEMWDVFCY 2290



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 268  VYYLEHP---EKLTLTEAREACQEDDATIAKVGQLFAAWK--FHGLDRCDAGWLADGSVR 322
            V++L  P    KLT  +AREAC  + AT+A   QL  A K  +H    C AGWL  G V 
Sbjct: 2199 VFHLRSPLGQYKLTFDKAREACANEAATMATYNQLSYAQKAKYH---LCSAGWLETGRVA 2255

Query: 323  YPVVHPHPNCGPPEPGVRSFGFPDPQSRLYGVYCYR 358
            YP      NCG    G+  +G    +S ++ V+CYR
Sbjct: 2256 YPTAFASQNCGSGVVGIVDYGPRPNKSEMWDVFCYR 2291


>gi|61743978 stabilin 1 precursor [Homo sapiens]
          Length = 2570

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 162  ELRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDAT 221
            E R  VF  Q+ +G Y  NF E +  C  Q AV+ASF QL  A + G   C  GWL + +
Sbjct: 2204 EKRAGVFHLQATSGPYGLNFSEAEAACEAQGAVLASFPQLSAAQQLGFHLCLMGWLANGS 2263

Query: 222  VQYPIMLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCF 260
              +P++ P   CG   +  G+ S G R     R+D +CF
Sbjct: 2264 TAHPVVFPVADCGNGRV--GIVSLGARKNLSERWDAYCF 2300



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 274  PEKLTLTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCG 333
            P  L  +EA  AC+   A +A   QL AA +  G   C  GWLA+GS  +PVV P  +CG
Sbjct: 2218 PYGLNFSEAEAACEAQGAVLASFPQLSAAQQL-GFHLCLMGWLANGSTAHPVVFPVADCG 2276

Query: 334  PPEPGVRSFGFPDPQSRLYGVYCYR 358
                G+ S G     S  +  YC+R
Sbjct: 2277 NGRVGIVSLGARKNLSERWDAYCFR 2301


>gi|26051243 tumor necrosis factor, alpha-induced protein 6
           precursor [Homo sapiens]
          Length = 277

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 276 KLTLTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPP 335
           KLT  EA+  C+ +   +A   QL AA K  G   C AGW+A G V YP+V P PNCG  
Sbjct: 48  KLTYAEAKAVCEFEGGHLATYKQLEAARKI-GFHVCAAGWMAKGRVGYPIVKPGPNCGFG 106

Query: 336 EPGVRSFGFPDPQSRLYGVYCYRQH 360
           + G+  +G    +S  +  YCY  H
Sbjct: 107 KTGIIDYGIRLNRSERWDAYCYNPH 131



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 150 DGLEDESGLVELELRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGL 209
           DG+   S  + LE    V+  ++ +G+Y+  + E + VC  +   +A+++QL  A + G 
Sbjct: 22  DGIFHNS--IWLERAAGVYHREARSGKYKLTYAEAKAVCEFEGGHLATYKQLEAARKIGF 79

Query: 210 DWCNAGWLQDATVQYPIMLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCF 260
             C AGW+    V YPI+ P   CG      G+  YG R  R  R+D +C+
Sbjct: 80  HVCAAGWMAKGRVGYPIVKPGPNCGFG--KTGIIDYGIRLNRSERWDAYCY 128


>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
           sapiens]
          Length = 365

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 49  LVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLR 108
           L + TPEE +   +G +  LPC++   P    P  +    W +S     + D ++ +   
Sbjct: 20  LSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIE---WLISPADNQKVDQVIILYSG 76

Query: 109 HRSFGDY----QGRVHLRQD--KEHDVSLEIQDLRLEDYGRYRCEV 148
            + + DY    +GRVH   +  K  D S+ + +L+L D G Y+C+V
Sbjct: 77  DKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKV 122


>gi|40549451 lymphatic vessel endothelial hyaluronan receptor 1
           [Homo sapiens]
          Length = 322

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 275 EKLTLTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGP 334
           ++L  TEA+EAC+    ++A   Q+  A K    + C  GW+ DG V    + P+P CG 
Sbjct: 50  QQLNFTEAKEACRLLGLSLAGKDQVETALKA-SFETCSYGWVGDGFVVISRISPNPKCG- 107

Query: 335 PEPGVRSFGFPDPQSRLYGVYCY 357
            + GV    +  P SR +  YCY
Sbjct: 108 -KNGVGVLIWKVPVSRQFAAYCY 129



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 23/94 (24%), Positives = 38/94 (40%)

Query: 145 RCEVIDGLEDESGLVELELRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRA 204
           R  V   L  E   +++  R +     S     Q NF E ++ C      +A  +Q+  A
Sbjct: 18  RLLVQGSLRAEELSIQVSCRIMGITLVSKKANQQLNFTEAKEACRLLGLSLAGKDQVETA 77

Query: 205 WEEGLDWCNAGWLQDATVQYPIMLPRQPCGGPGL 238
            +   + C+ GW+ D  V    + P   CG  G+
Sbjct: 78  LKASFETCSYGWVGDGFVVISRISPNPKCGKNGV 111


>gi|6005958 V-set and immunoglobulin domain containing 4 isoform 1
           [Homo sapiens]
          Length = 399

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 24/151 (15%)

Query: 50  VVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRH 109
           ++E PE     ++G  V LPC Y     L    +V VKW  L + G+      V I LR 
Sbjct: 22  ILEVPESVTGPWKG-DVNLPCTY---DPLQGYTQVLVKW--LVQRGSDP----VTIFLRD 71

Query: 110 RSFGD------YQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVI----DG---LEDES 156
            S GD      YQGR+H+      DVSL++  L ++D   Y CEV     DG   + D+ 
Sbjct: 72  SS-GDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTPDGNQVVRDKI 130

Query: 157 GLVELELRGVVFPYQSPNGRYQFNFHEGQQV 187
             + ++   V  P  +    Y F   +G ++
Sbjct: 131 TELRVQKLSVSKPTVTTGSGYGFTVPQGMRI 161


>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
          Length = 319

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 51  VETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRHR 110
           VETP++ L   QG SV LPC Y       S R   ++W KL      E+ V+     ++ 
Sbjct: 24  VETPQDVLRASQGKSVTLPCTYH---TSTSSREGLIQWDKLLLTHT-ERVVIWPFSNKNY 79

Query: 111 SFGD-YQGRVHLRQDKEH-DVSLEIQDLRLEDYGRYRCEV 148
             G+ Y+ RV +  + E  D S+ I  L + D G Y C V
Sbjct: 80  IHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSV 119


>gi|154426280 V-set and immunoglobulin domain containing 4 isoform 2
           [Homo sapiens]
          Length = 305

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 17/105 (16%)

Query: 50  VVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAIGLRH 109
           ++E PE     ++G  V LPC Y     L    +V VKW  L + G+      V I LR 
Sbjct: 22  ILEVPESVTGPWKG-DVNLPCTY---DPLQGYTQVLVKW--LVQRGSDP----VTIFLRD 71

Query: 110 RSFGD------YQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEV 148
            S GD      YQGR+H+      DVSL++  L ++D   Y CEV
Sbjct: 72  SS-GDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEV 115


>gi|61966777 V-set and immunoglobulin domain containing 8 [Homo
           sapiens]
          Length = 414

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 6/100 (6%)

Query: 55  EETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAI----GLRHR 110
           +E L+  +G +V L C Y  +P    P  + ++W +++ + A  ++ +        + H 
Sbjct: 29  QEVLYLAEGDNVRLGCPYVLDPEDYGPNGLDIEWMQVNSDPAHHRENVFLSYQDKRINHG 88

Query: 111 SFGDYQGRVHL--RQDKEHDVSLEIQDLRLEDYGRYRCEV 148
           S    Q RV        ++D S+ + +L++ D   Y C V
Sbjct: 89  SLPHLQQRVRFAASDPSQYDASINLMNLQVSDTATYECRV 128


>gi|19743898 receptor tyrosine kinase-like orphan receptor 2
           precursor [Homo sapiens]
          Length = 943

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 44  LNGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLV 103
           L G  L    P   +   QG + IL C+    P         V+W K   N AP      
Sbjct: 57  LKGYFLNFLEPVNNITIVQGQTAILHCKVAGNPP------PNVRWLK---NDAPVVQEPR 107

Query: 104 AIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELEL 163
            I +R   +G                 L IQDL   D G Y+C   +G++  +    L +
Sbjct: 108 RIIIRKTEYGS---------------RLRIQDLDTTDTGYYQCVATNGMKTITATGVLFV 152

Query: 164 RGVVFPYQSPNGRYQFNFHE 183
           R  + P  SPN  +Q ++HE
Sbjct: 153 R--LGPTHSPNHNFQDDYHE 170


>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
          Length = 352

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 44  LNGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLV 103
           L GV   V    ++++ + G  V+L C +     L S +  +V W K S NG+ +   + 
Sbjct: 25  LPGVHSQVVQVNDSMYGFIGTDVVLHCSFANP--LPSVKITQVTWQK-STNGSKQNVAIY 81

Query: 104 AIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCE 147
              +       Y+ RV   +    D ++ +  L LED G Y CE
Sbjct: 82  NPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICE 125


>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
          Length = 458

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 44  LNGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLV 103
           L GV   V    ++++ + G  V+L C +     L S +  +V W K S NG+ +   + 
Sbjct: 25  LPGVHSQVVQVNDSMYGFIGTDVVLHCSFANP--LPSVKITQVTWQK-STNGSKQNVAIY 81

Query: 104 AIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCE 147
              +       Y+ RV   +    D ++ +  L LED G Y CE
Sbjct: 82  NPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICE 125


>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
          Length = 517

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 44  LNGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLV 103
           L GV   V    ++++ + G  V+L C +     L S +  +V W K S NG+ +   + 
Sbjct: 25  LPGVHSQVVQVNDSMYGFIGTDVVLHCSFANP--LPSVKITQVTWQK-STNGSKQNVAIY 81

Query: 104 AIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCE 147
              +       Y+ RV   +    D ++ +  L LED G Y CE
Sbjct: 82  NPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICE 125


>gi|63054855 erythroblast membrane-associated protein precursor
           [Homo sapiens]
          Length = 475

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 114 DYQGRVHLRQD-KEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELEL 163
           +Y+GR  L +D +E  V+L+I D+RLED G YRC +  G   +   V L++
Sbjct: 93  EYKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGNLSKEDTVILQV 143


>gi|19923536 erythroblast membrane-associated protein precursor
           [Homo sapiens]
          Length = 475

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 114 DYQGRVHLRQD-KEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELEL 163
           +Y+GR  L +D +E  V+L+I D+RLED G YRC +  G   +   V L++
Sbjct: 93  EYKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGNLSKEDTVILQV 143


>gi|226437599 V-set and transmembrane domain containing 2B [Homo
           sapiens]
          Length = 285

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 12/102 (11%)

Query: 62  QGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAI-----GLRHRSFGDYQ 116
           +G  + +PC +R   A  +   + ++WW L E   P +++L  +     G R +      
Sbjct: 41  EGDDIEMPCAFRASGA--TSYSLEIQWWYLKE---PPRELLHELALSVPGARSKVTNKDA 95

Query: 117 GRVHLRQDKEHDVS--LEIQDLRLEDYGRYRCEVIDGLEDES 156
            ++   + + +D+S  L +  +RL+D G Y C V D  +D++
Sbjct: 96  TKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137


>gi|239757226 PREDICTED: V-set and transmembrane domain containing
           2B [Homo sapiens]
          Length = 285

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 12/102 (11%)

Query: 62  QGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAI-----GLRHRSFGDYQ 116
           +G  + +PC +R   A  +   + ++WW L E   P +++L  +     G R +      
Sbjct: 41  EGDDIEMPCAFRASGA--TSYSLEIQWWYLKE---PPRELLHELALSVPGARSKVTNKDA 95

Query: 117 GRVHLRQDKEHDVS--LEIQDLRLEDYGRYRCEVIDGLEDES 156
            ++   + + +D+S  L +  +RL+D G Y C V D  +D++
Sbjct: 96  TKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137


>gi|239751732 PREDICTED: V-set and transmembrane domain containing
           2B [Homo sapiens]
          Length = 285

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 12/102 (11%)

Query: 62  QGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAI-----GLRHRSFGDYQ 116
           +G  + +PC +R   A  +   + ++WW L E   P +++L  +     G R +      
Sbjct: 41  EGDDIEMPCAFRASGA--TSYSLEIQWWYLKE---PPRELLHELALSVPGARSKVTNKDA 95

Query: 117 GRVHLRQDKEHDVS--LEIQDLRLEDYGRYRCEVIDGLEDES 156
            ++   + + +D+S  L +  +RL+D G Y C V D  +D++
Sbjct: 96  TKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137


>gi|239746233 PREDICTED: V-set and transmembrane domain containing
           2B [Homo sapiens]
          Length = 285

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 12/102 (11%)

Query: 62  QGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVLVAI-----GLRHRSFGDYQ 116
           +G  + +PC +R   A  +   + ++WW L E   P +++L  +     G R +      
Sbjct: 41  EGDDIEMPCAFRASGA--TSYSLEIQWWYLKE---PPRELLHELALSVPGARSKVTNKDA 95

Query: 117 GRVHLRQDKEHDVS--LEIQDLRLEDYGRYRCEVIDGLEDES 156
            ++   + + +D+S  L +  +RL+D G Y C V D  +D++
Sbjct: 96  TKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDT 137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.142    0.462 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,723,024
Number of Sequences: 37866
Number of extensions: 839725
Number of successful extensions: 2444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 2235
Number of HSP's gapped (non-prelim): 181
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.