Guide to the Human Genome
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Name: TNPO3 Sequence: fasta or formatted (923aa) NCBI GI: 6912734
Description:

transportin 3

Referenced in:

Nucleus and Nucleolus
Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         62           3
 C cysteine            3.5         32           2
 D aspartate           5.0         46           2
 E glutamate           7.4         68           2
 F phenylalanine       4.0         37           1
 G glycine             4.3         40           1
 H histidine           3.3         30           1
 I isoleucine          4.6         42           2
 K lysine              3.8         35           2
 L leucine            14.2        131           3
 M methionine          2.5         23           1
 N asparagine          3.4         31           2
 P proline             4.1         38           2
 Q glutamine           5.4         50           2
 R arginine            4.9         45           2
 S serine              5.7         53           2
 T threonine           5.7         53           2
 V valine              8.2         76           2
 W tryptophan          1.2         11           1
 Y tyrosine            2.2         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transportin 3 
IPO13                 0.096   importin 13 
XPOT                  0.007   tRNA exportin 
IPO5                  0.005   importin 5 
BTAF1                 0.005   BTAF1 RNA polymerase II, B-TFIID transcription facto...
XPO1                  0.005   exportin 1 
CD96                  0.004   CD96 antigen isoform 1 precursor 
CD96                  0.004   CD96 antigen isoform 2 precursor 
RMND5A                0.004   required for meiotic nuclear division 5 homolog A [H...
MACF1                 0.004   microfilament and actin filament cross-linker protei...
MACF1                 0.004   microfilament and actin filament cross-linker protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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