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Search of human proteins with 28827822
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28827822 hypothetical protein LOC128346 [Homo sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28827822 hypothetical protein LOC128346 [Homo sapiens] 318 9e-88
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 35 0.020
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 33 0.098
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 32 0.22
gi|208431815 protein tyrosine phosphatase, receptor type, K isof... 32 0.29
gi|18860902 protein tyrosine phosphatase, receptor type, K isofo... 32 0.29
gi|157426887 dedicator of cytokinesis 6 [Homo sapiens] 31 0.49
gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens] 30 0.64
gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens] 30 0.64
gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens] 30 0.64
gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent R... 30 1.1
gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger)... 29 1.9
gi|29244926 corin [Homo sapiens] 29 1.9
gi|157419150 protein tyrosine phosphatase, receptor type, M isof... 29 1.9
gi|157419152 protein tyrosine phosphatase, receptor type, M isof... 29 1.9
gi|218777830 inositol hexakisphosphate kinase 3 [Homo sapiens] 29 1.9
gi|55769530 inositol hexakisphosphate kinase 3 [Homo sapiens] 29 1.9
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 29 1.9
gi|8922243 transmembrane protein 45A [Homo sapiens] 29 1.9
gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B... 28 2.4
gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B... 28 2.4
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 28 2.4
gi|170932516 paxillin isoform 2 [Homo sapiens] 28 3.2
gi|170932514 paxillin isoform 1 [Homo sapiens] 28 3.2
gi|167857792 programmed cell death 1 precursor [Homo sapiens] 28 3.2
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 28 3.2
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 28 3.2
gi|148227044 ecotropic viral integration site 2B [Homo sapiens] 28 3.2
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ... 28 3.2
gi|16933557 dachsous 1 precursor [Homo sapiens] 28 3.2
>gi|28827822 hypothetical protein LOC128346 [Homo sapiens]
Length = 155
Score = 318 bits (816), Expect = 9e-88
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MGGNGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFL 60
MGGNGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFL
Sbjct: 1 MGGNGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFL 60
Query: 61 IIKSYRKYRRERLPISPGPLLRWVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTY 120
IIKSYRKYRRERLPISPGPLLRWVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTY
Sbjct: 61 IIKSYRKYRRERLPISPGPLLRWVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTY 120
Query: 121 ASTTFKLSEEKSNHLAENHSADFDPIVYAQIKVTN 155
ASTTFKLSEEKSNHLAENHSADFDPIVYAQIKVTN
Sbjct: 121 ASTTFKLSEEKSNHLAENHSADFDPIVYAQIKVTN 155
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 35.4 bits (80), Expect = 0.020
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 23/142 (16%)
Query: 25 TSPAPCLSNHH---NKKHLILAFCAGVLLTLLLIAFIFLIIKSYR--KYRRERLPISPGP 79
TS +P L+ HH K L L+ ++ T+LL+ + + ++R KY+++ +SP
Sbjct: 135 TSSSPTLTGHHLDNRHKLLKLSVLLPLIFTILLLLLVAASLLAWRMMKYQQKAAGMSPEQ 194
Query: 80 LLRWVPL------------LSGTMADHSKPQAPDPHSDPP----AKLSSIPGESLTYAST 123
+L+ PL L+GT + + D ++S+P E ++YAS
Sbjct: 195 VLQ--PLEGDLCYADLTLQLAGTSPQKATTKLSSAQVDQVEVEYVTMASLPKEDISYASL 252
Query: 124 TFKLSEEKSNHLAENHSADFDP 145
T +++ + H + P
Sbjct: 253 TLGAEDQEPTYCNMGHLSSHLP 274
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 33.1 bits (74), Expect = 0.098
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 69 RRERLPISPGPLLRWVPLLSGTMADHSKPQA-PDPHSDPPAKLSSIPGESLTYASTTFKL 127
+RE +SP P++ +P + G D S A + P K ++P ++T S T +
Sbjct: 771 KRENTTVSPPPVVTQLPNIPGEEDDSSGMLALHEEFMVPATKALNLPARTVTADSRT--I 828
Query: 128 SEEKSNHLAENHSADFDPIVYAQI 151
S+ ++ N+ +F P+V +QI
Sbjct: 829 SDSPMTNI--NYGTEFSPVVNSQI 850
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 32.0 bits (71), Expect = 0.22
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 2 GGNGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLI 61
GG T +P T + LS + P++ P S + +A GVL LLL+A + L
Sbjct: 630 GGTAQTPEPGTSQPMPLSKSTPSSGGGP--SEDKRFSVVDMAALGGVLGALLLLALLGLA 687
Query: 62 IKSYRKYRRERLPISPGPLLRWVPLLSGTMA---DHSKPQA--PDPHSDPPAKLSSIPGE 116
+ ++ Y RL G P A DH A P P DP + +P E
Sbjct: 688 VLVHKHY-GPRLKCCSGKAPEPQPQGFDNQAFLPDHKANWAPVPSPTHDPKPAEAPMPAE 746
>gi|208431815 protein tyrosine phosphatase, receptor type, K isoform
a [Homo sapiens]
Length = 1446
Score = 31.6 bits (70), Expect = 0.29
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 19 STAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKSYR--KYRRERLPIS 76
+T P P P K I AG+L+ +LL+ + LI+K + K R++ + +
Sbjct: 734 ATEEPEVIPDPAKQTDRVVK--IAGISAGILVFILLLLVVILIVKKSKLAKKRKDAMGNT 791
Query: 77 PGPLLRWVPLLSGTMADHSKPQAPDPHS 104
+ V + + AD S A DP S
Sbjct: 792 RQEMTHMVNAMDRSYADQSTLHAEDPLS 819
>gi|18860902 protein tyrosine phosphatase, receptor type, K isoform
b [Homo sapiens]
Length = 1440
Score = 31.6 bits (70), Expect = 0.29
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 19 STAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKSYR--KYRRERLPIS 76
+T P P P K I AG+L+ +LL+ + LI+K + K R++ + +
Sbjct: 734 ATEEPEVIPDPAKQTDRVVK--IAGISAGILVFILLLLVVILIVKKSKLAKKRKDAMGNT 791
Query: 77 PGPLLRWVPLLSGTMADHSKPQAPDPHS 104
+ V + + AD S A DP S
Sbjct: 792 RQEMTHMVNAMDRSYADQSTLHAEDPLS 819
>gi|157426887 dedicator of cytokinesis 6 [Homo sapiens]
Length = 2047
Score = 30.8 bits (68), Expect = 0.49
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 31 LSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGP--LLRWVPLLS 88
L+ H N LAF LL+L+ F+F +++++ K RL SP P LL +
Sbjct: 989 LAEHLNAS---LAFFLSDLLSLVDRGFVFSLVRAHYKQVATRLQSSPNPAALLTLRMEFT 1045
Query: 89 GTMADH------SKPQAP-DPHSDPPAKLSSIPGESLTYAS 122
+ H + P P P + P +SS +S T++S
Sbjct: 1046 RILCSHEHYVTLNLPCCPLSPPASPSPSVSSTTSQSSTFSS 1086
>gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]
Length = 1137
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 83 WVPLLSGTMADHSKPQAPDPHSDPPAKLSSIP 114
W P L + +DHS P + PHS P+ L S P
Sbjct: 986 WSPSLPAS-SDHSTPASQSPHSSNPSSLPSSP 1016
>gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]
Length = 1049
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 83 WVPLLSGTMADHSKPQAPDPHSDPPAKLSSIP 114
W P L + +DHS P + PHS P+ L S P
Sbjct: 898 WSPSLPAS-SDHSTPASQSPHSSNPSSLPSSP 928
>gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]
Length = 1091
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 83 WVPLLSGTMADHSKPQAPDPHSDPPAKLSSIP 114
W P L + +DHS P + PHS P+ L S P
Sbjct: 940 WSPSLPAS-SDHSTPASQSPHSSNPSSLPSSP 970
>gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent
Rac exchange factor 1 [Homo sapiens]
Length = 1659
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 3 GNGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFC 45
G G PD G AAP++ P PC + +++ L L C
Sbjct: 13 GAGDCAHPDPRAPGA---AAPSSGPGPCAAARESERQLRLRLC 52
>gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger),
isoform 3 [Homo sapiens]
Length = 834
Score = 28.9 bits (63), Expect = 1.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 70 RERLPISPGPLLRWVPLLSGTMADHSKPQAPDPHSDPPAKL 110
R ++P SPG R +P + + S QA P PPA L
Sbjct: 788 RTQIPYSPGTFCRLMPFRLSSKSVDSFLQADGPEERPPAAL 828
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 28.9 bits (63), Expect = 1.9
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 40 LILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLRWVPLLSGTMADHS---K 96
LI CA VLL ++L++++ + K Y K ++ G + +L+ T+ + S
Sbjct: 51 LIPCICALVLLLVILLSYVGTLQKVYFKSNGSEPLVTDGEIQGSDVILTNTIYNQSTVVS 110
Query: 97 PQAPDPHSDPPAKLSSIPGE 116
PD H +S+PG+
Sbjct: 111 TAHPDQHVPAWTTDASLPGD 130
>gi|157419150 protein tyrosine phosphatase, receptor type, M isoform
2 precursor [Homo sapiens]
Length = 1452
Score = 28.9 bits (63), Expect = 1.9
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 4 NGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIK 63
NG T K D + T A P P P H K I AG+LL +++ + L++K
Sbjct: 709 NGET-KIDCVQVATKGAATPKPVPEPEKQTDHTVK--IAGVIAGILLFVIIFLGVVLVMK 765
Query: 64 SYRKYRRER 72
RK ++R
Sbjct: 766 K-RKLAKKR 773
>gi|157419152 protein tyrosine phosphatase, receptor type, M isoform
1 precursor [Homo sapiens]
Length = 1465
Score = 28.9 bits (63), Expect = 1.9
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 4 NGSTCKPDTERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIK 63
NG T K D + T A P P P H K I AG+LL +++ + L++K
Sbjct: 709 NGET-KIDCVQVATKGAATPKPVPEPEKQTDHTVK--IAGVIAGILLFVIIFLGVVLVMK 765
Query: 64 SYRKYRRER 72
RK ++R
Sbjct: 766 K-RKLAKKR 773
>gi|218777830 inositol hexakisphosphate kinase 3 [Homo sapiens]
Length = 410
Score = 28.9 bits (63), Expect = 1.9
Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 18/99 (18%)
Query: 35 HNKKHLILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLRWVPLLSGTMADH 94
HN HL +L L + + SYR Y L I G
Sbjct: 289 HNGSHLRRELLEPILHQLRALLSVIRSQSSYRFYSSSLLVI-----------YDGQEPPE 337
Query: 95 SKPQAPDPHSDPPAKLSSIPG-------ESLTYASTTFK 126
P +P PH P A S PG + +A TT+K
Sbjct: 338 RAPGSPHPHEAPQAAHGSSPGGLTKVDIRMIDFAHTTYK 376
>gi|55769530 inositol hexakisphosphate kinase 3 [Homo sapiens]
Length = 410
Score = 28.9 bits (63), Expect = 1.9
Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 18/99 (18%)
Query: 35 HNKKHLILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLRWVPLLSGTMADH 94
HN HL +L L + + SYR Y L I G
Sbjct: 289 HNGSHLRRELLEPILHQLRALLSVIRSQSSYRFYSSSLLVI-----------YDGQEPPE 337
Query: 95 SKPQAPDPHSDPPAKLSSIPG-------ESLTYASTTFK 126
P +P PH P A S PG + +A TT+K
Sbjct: 338 RAPGSPHPHEAPQAAHGSSPGGLTKVDIRMIDFAHTTYK 376
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 28.9 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 91 MADHSKPQAPDPHSDPPAKLSSIPGES 117
+A+H P+AP+ S PP LSS+P E+
Sbjct: 1318 VAEHPAPEAPE--SSPPLPLSSLPPEA 1342
>gi|8922243 transmembrane protein 45A [Homo sapiens]
Length = 275
Score = 28.9 bits (63), Expect = 1.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 23 PTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLR 82
P+ PA L +H N L + FC +T++++ + I K R +RL S LL+
Sbjct: 204 PSGGPAWDLMDHENILFLTICFCWHYAVTIVIVGMNYAFITWLVKSRLKRLCSSEVGLLK 263
>gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 4 [Homo sapiens]
Length = 651
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 4 NGSTCKPDTERQGTLSTAAPTTSP-APCLSNHHNK--KHL--ILAFCAGVLLTLLLIAFI 58
+G + P + G ST+ P P P S+ + +HL ++ V+L LLL+ +
Sbjct: 420 SGPSGGPSSPTTGPTSTSGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLL 479
Query: 59 FLIIKSYRK 67
FLI++ R+
Sbjct: 480 FLILRHRRQ 488
>gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 1 [Homo sapiens]
Length = 650
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 4 NGSTCKPDTERQGTLSTAAPTTSP-APCLSNHHNK--KHL--ILAFCAGVLLTLLLIAFI 58
+G + P + G ST+ P P P S+ + +HL ++ V+L LLL+ +
Sbjct: 420 SGPSGGPSSPTTGPTSTSGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLL 479
Query: 59 FLIIKSYRK 67
FLI++ R+
Sbjct: 480 FLILRHRRQ 488
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 28.5 bits (62), Expect = 2.4
Identities = 28/117 (23%), Positives = 36/117 (30%), Gaps = 25/117 (21%)
Query: 23 PTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLR 82
P P P + H ++ H L AG L R R PI + +
Sbjct: 358 PAPPPPPAPAQHPHQHHPHLPGAAGAFL------------------RYMRQPIKQELICK 399
Query: 83 WVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTYASTTFKLSEEKSNHLAENH 139
W+ +A P P P PP P S TF E NH+ H
Sbjct: 400 WID--PDELAGLPPPPPPPPPPPPPP-----PAGGAKPCSKTFGTMHELVNHVTVEH 449
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 28.1 bits (61), Expect = 3.2
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 79 PLLRWVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTYASTTFKLSEEKSNHLAEN 138
PL +W P S + H +PQ+ P AK SS+ + S ++ EE+ + N
Sbjct: 65 PLDQWQP--SSSRFIHQQPQSSSPVYGSSAKTSSVSNPQDSVGSPCSRVGEEEHVYSFPN 122
Query: 139 HSADFDP 145
+P
Sbjct: 123 KQKSAEP 129
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 28.1 bits (61), Expect = 3.2
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 79 PLLRWVPLLSGTMADHSKPQAPDPHSDPPAKLSSIPGESLTYASTTFKLSEEKSNHLAEN 138
PL +W P S + H +PQ+ P AK SS+ + S ++ EE+ + N
Sbjct: 65 PLDQWQP--SSSRFIHQQPQSSSPVYGSSAKTSSVSNPQDSVGSPCSRVGEEEHVYSFPN 122
Query: 139 HSADFDP 145
+P
Sbjct: 123 KQKSAEP 129
>gi|167857792 programmed cell death 1 precursor [Homo sapiens]
Length = 288
Score = 28.1 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 12 TERQGTLSTAAPTTSPAPCLSNHHNKKHLILAFCAGVLLTLLLIAFIFLIIKS 64
TER+ + TA P+ SP P + L++ G+L +L+L+ ++ +I S
Sbjct: 145 TERRAEVPTAHPSPSPRPA----GQFQTLVVGVVGGLLGSLVLLVWVLAVICS 193
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 28.1 bits (61), Expect = 3.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 102 PHSD---PPAKLSSIPGESLTYASTTFKLSEEKSNHL 135
PH D PPA+LS P + + TF++S K ++L
Sbjct: 256 PHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNL 292
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 28.1 bits (61), Expect = 3.2
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LPISPGPLLR-----WVPLLSGTMADHSKPQAPDPHSDPPAKLSSIP-------GESLTY 120
L ++PGP R ++ + D S PQ P P S LS++P E +
Sbjct: 2202 LALAPGPPTRTRHDEYLEVTKAPSLDSSLPQLPSPSSPGAPLLSNLPRPASPALSEGSSS 2261
Query: 121 ASTTFKLSE-----EKSNHLAENHSADFDP 145
+TT +S S AE S + DP
Sbjct: 2262 EATTPVISSVAERFSPSLEAAEQESGELDP 2291
>gi|148227044 ecotropic viral integration site 2B [Homo sapiens]
Length = 448
Score = 28.1 bits (61), Expect = 3.2
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 10 PDTERQGTLSTAAPTTSPAPCLSNHHNKK-------HLILAFCAGVLLTLLLIAFIFLII 62
P T+ T+ + P ++P L NK+ + I A GVLLT +L+A I +++
Sbjct: 166 PSTQPTSTVKNS-PRSTPGFILDTTSNKQTPQKNNYNSIAAILIGVLLTSMLVAIIIIVL 224
Query: 63 -KSYRK 67
K RK
Sbjct: 225 WKCLRK 230
>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
sapiens]
Length = 1281
Score = 28.1 bits (61), Expect = 3.2
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 72 RLPISPGPLLRWVPLLSG-TMADHSKPQAPDPHSDPPAKLSSIPG--------ESLTYAS 122
R S P LR + SG T + S PQAP+ HS P S G E+ Y+
Sbjct: 1070 RSSASAPPTLRPIISPSGPTWSTQSDPQAPENHSSSPGSRSLQTGGFAWEGEVENNVYSQ 1129
Query: 123 TTFKLSEEKSNHLAENHSADF 143
T + + K + A ++ F
Sbjct: 1130 ATGVVPQHKYHPTAGSYQLQF 1150
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 28.1 bits (61), Expect = 3.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 42 LAFCAGVLLTLLLIAFIFLIIKSYRKYRRERLPISPGPLLRWVPLLSGTMADHSKPQAPD 101
+A GV++ L L A + ++++ R + +PGP+ + PL S D + +
Sbjct: 2941 VAASLGVVVVLALAALVLGLVRA----RSRKAEAAPGPMSQAAPLAS----DSLQKLGRE 2992
Query: 102 PHSDPPAK 109
P S PP++
Sbjct: 2993 PPSPPPSE 3000
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,945,845
Number of Sequences: 37866
Number of extensions: 325291
Number of successful extensions: 1600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1566
Number of HSP's gapped (non-prelim): 70
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.