Guide to the Human Genome
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Name: TMEM45A Sequence: fasta or formatted (275aa) NCBI GI: 8922243
Description:

transmembrane protein 45A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         11           1
 C cysteine            2.5          7           1
 D aspartate           1.8          5           1
 E glutamate           5.5         15           3
 F phenylalanine       8.7         24           3
 G glycine             8.4         23           2
 H histidine           3.6         10           2
 I isoleucine          6.9         19           2
 K lysine              4.0         11           2
 L leucine            16.0         44           2
 M methionine          3.6         10           1
 N asparagine          3.3          9           2
 P proline             2.5          7           2
 Q glutamine           2.9          8           1
 R arginine            3.3          9           1
 S serine              5.1         14           2
 T threonine           5.1         14           1
 V valine              6.2         17           2
 W tryptophan          2.9          8           2
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 45A 
TMEM45B               0.399   transmembrane protein 45B 
TEDDM1                0.121   putative membrane protein HE9 
MC5R                  0.015   melanocortin 5 receptor 
SLC28A2               0.015   solute carrier family 28 (sodium-coupled nucleoside...
OR13C4                0.015   olfactory receptor, family 13, subfamily C, member 4...
OR2S2                 0.013   olfactory receptor, family 2, subfamily S, member 2...
OR13C3                0.013   olfactory receptor, family 13, subfamily C, member 3...
STEAP2                0.013   six transmembrane epithelial antigen of the prostat...
STEAP2                0.013   six transmembrane epithelial antigen of the prostat...
STEAP2                0.013   six transmembrane epithelial antigen of the prostat...
OR7C1                 0.011   olfactory receptor, family 7, subfamily C, member 1 ...
OR2J2                 0.011   olfactory receptor, family 2, subfamily J, member 2...
F8                    0.009   coagulation factor VIII isoform a precursor 
OR3A2                 0.009   olfactory receptor, family 3, subfamily A, member 2 ...
OR3A3                 0.009   olfactory receptor, family 3, subfamily A, member 3 ...
OR51A7                0.009   olfactory receptor, family 51, subfamily A, member 7...
OR13C5                0.009   olfactory receptor, family 13, subfamily C, member 5...
OR13C2                0.009   olfactory receptor, family 13, subfamily C, member 2...
OR13C9                0.009   olfactory receptor, family 13, subfamily C, member 9...
OR2A14                0.009   olfactory receptor, family 2, subfamily A, member 14...
OR13D1                0.009   olfactory receptor, family 13, subfamily D, member 1...
OR2J3                 0.009   olfactory receptor, family 2, subfamily J, member 3...
OR10K1                0.009   olfactory receptor, family 10, subfamily K, member 1...
OR3A1                 0.007   olfactory receptor, family 3, subfamily A, member 1 [...
OR7C2                 0.007   olfactory receptor, family 7, subfamily C, member 2 ...
OR51B5                0.007   olfactory receptor, family 51, subfamily B, member 5...
OR2AT4                0.007   olfactory receptor, family 2, subfamily AT, member 4...
HEATR5B               0.007   HEAT repeat containing 5B 
ZDHHC4                0.007   zinc finger, DHHC-type containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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