Guide to the Human Genome
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Name: ZNF511 Sequence: fasta or formatted (252aa) NCBI GI: 28274701
Description:

zinc finger protein 511

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         29           2
 C cysteine            4.4         11           2
 D aspartate           6.3         16           2
 E glutamate           6.7         17           1
 F phenylalanine       6.0         15           2
 G glycine             6.0         15           1
 H histidine           4.8         12           2
 I isoleucine          2.8          7           1
 K lysine              5.2         13           3
 L leucine             6.0         15           2
 M methionine          2.4          6           1
 N asparagine          0.8          2           1
 P proline             8.3         21           2
 Q glutamine           4.8         12           1
 R arginine            8.3         21           2
 S serine              5.6         14           1
 T threonine           2.0          5           1
 V valine              5.6         14           1
 W tryptophan          0.4          1           1
 Y tyrosine            2.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 511 
GTF3A                 0.036   transcription factor IIIA 
ZNF143                0.034   zinc finger protein 143 
ZNF76                 0.032   zinc finger protein 76 (expressed in testis) 
YY2                   0.028   YY2 transcription factor 
ZNF341                0.026   zinc finger protein 341 
GLI3                  0.024   GLI-Kruppel family member GLI3 
GLIS2                 0.024   GLIS family zinc finger 2 
MTF1                  0.024   metal-regulatory transcription factor 1 
ZNF541                0.024   zinc finger protein 541 
BNC2                  0.022   basonuclin 2 
ZNF277                0.022   zinc finger protein (C2H2 type) 277 
ZNF292                0.022   zinc finger protein 292 
YY1                   0.020   YY1 transcription factor 
PRDM10                0.020   PR domain containing 10 isoform 2 
PRDM10                0.020   PR domain containing 10 isoform 4 
PRDM10                0.020   PR domain containing 10 isoform 1 
PRDM10                0.020   PR domain containing 10 isoform 3 
CTCF                  0.020   CCCTC-binding factor 
ZFAT                  0.020   zinc finger protein 406 isoform ZFAT-1 
ZFAT                  0.020   zinc finger protein 406 isoform TR-ZFAT 
GLI1                  0.018   GLI family zinc finger 1 isoform 2 
GLI1                  0.018   GLI family zinc finger 1 isoform 1 
EGR4                  0.018   early growth response 4 
ZFP42                 0.018   zinc finger protein 42 
BNC1                  0.018   basonuclin 1 
RANBP3                0.016   RAN binding protein 3 isoform RANBP3-a 
RANBP3                0.016   RAN binding protein 3 isoform RANBP3-d 
ZNF654                0.016   zinc finger protein 654 
ZXDB                  0.016   zinc finger, X-linked, duplicated B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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