Guide to the Human Genome
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Name: YY2 Sequence: fasta or formatted (372aa) NCBI GI: 156119609
Description:

YY2 transcription factor

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         18           2
 C cysteine            2.4          9           1
 D aspartate           6.5         24           1
 E glutamate           7.3         27           2
 F phenylalanine       3.8         14           1
 G glycine             7.0         26           2
 H histidine           4.0         15           1
 I isoleucine          3.0         11           1
 K lysine              7.5         28           2
 L leucine             8.1         30           1
 M methionine          2.7         10           1
 N asparagine          4.6         17           2
 P proline             7.3         27           2
 Q glutamine           5.1         19           1
 R arginine            3.2         12           2
 S serine              8.6         32           4
 T threonine           6.5         24           1
 V valine              4.8         18           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   YY2 transcription factor 
YY1                   0.528   YY1 transcription factor 
ZFP42                 0.307   zinc finger protein 42 
ZNF628                0.111   zinc finger protein 628 
LOC100292052          0.109   PREDICTED: similar to hCG1773661 
LOC100287226          0.109   PREDICTED: similar to hCG1773661 
LOC100287226          0.109   PREDICTED: hypothetical protein XP_002343677 
ZNF596                0.109   zinc finger protein 596 
ZNF596                0.109   zinc finger protein 596 
ZNF596                0.109   zinc finger protein 596 
ZNF643                0.109   zinc finger protein 643 
ZNF664                0.109   zinc finger protein 664 
ZNF787                0.109   zinc finger protein 787 
MTF1                  0.109   metal-regulatory transcription factor 1 
ZNF76                 0.109   zinc finger protein 76 (expressed in testis) 
ZNF41                 0.108   zinc finger protein 41 
ZNF41                 0.108   zinc finger protein 41 
ZNF470                0.108   zinc finger protein 470 
ZNF629                0.107   zinc finger protein 629 
ZNF317                0.107   zinc finger protein 317 
ZNF143                0.107   zinc finger protein 143 
ZIC5                  0.107   zinc finger protein of the cerebellum 5 
ZNF726                0.105   PREDICTED: zinc finger protein 726 
ZNF726                0.105   PREDICTED: zinc finger protein 726 
ZNF726                0.105   PREDICTED: zinc finger protein 726 
ZNF22                 0.105   zinc finger protein 22 (KOX 15) 
ZNF430                0.104   zinc finger protein 430 
ZNF642                0.104   zinc finger protein 642 
ZNF266                0.104   zinc finger protein 266 
ZNF266                0.104   zinc finger protein 266 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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