Guide to the Human Genome
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Name: ZNF660 Sequence: fasta or formatted (331aa) NCBI GI: 28212278
Description:

zinc finger protein 660

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7          9           1
 C cysteine            6.9         23           2
 D aspartate           2.1          7           1
 E glutamate           8.8         29           2
 F phenylalanine       2.7          9           1
 G glycine             6.6         22           1
 H histidine           7.3         24           2
 I isoleucine          3.3         11           1
 K lysine             12.1         40           2
 L leucine             4.2         14           1
 M methionine          0.9          3           1
 N asparagine          4.5         15           1
 P proline             2.4          8           1
 Q glutamine           4.8         16           1
 R arginine            7.6         25           2
 S serine              8.5         28           2
 T threonine           7.3         24           1
 V valine              3.6         12           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 660 
ZNF345                0.553   zinc finger protein 345 
ZNF135                0.547   zinc finger protein 135 
ZNF167                0.540   zinc finger protein 167 isoform 1 
LOC344065             0.539   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.539   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.539   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF852                0.536   PREDICTED: zinc finger protein 852 
ZNF852                0.536   PREDICTED: zinc finger protein 852 
ZNF852                0.536   PREDICTED: zinc finger protein 852 
ZNF383                0.534   zinc finger protein 383 
ZNF665                0.533   zinc finger protein 665 
ZNF420                0.531   zinc finger protein 420 
ZNF300                0.531   zinc finger protein 300 
ZNF502                0.531   zinc finger protein 502 
ZNF502                0.531   zinc finger protein 502 
ZNF502                0.531   zinc finger protein 502 
ZNF502                0.531   zinc finger protein 502 
ZFP2                  0.531   zinc finger protein 2 homolog 
ZNF254                0.531   zinc finger protein 254 
DKFZp686E2433         0.528   hypothetical protein LOC345462 
ZNF34                 0.527   zinc finger protein 34 
ZNF568                0.525   zinc finger protein 568 
ZNF675                0.525   zinc finger protein 675 
ZNF570                0.525   zinc finger protein 570 
ZNF23                 0.524   zinc finger protein 23 
ZFP3                  0.524   zinc finger protein-3 
ZNF79                 0.523   zinc finger protein 79 
LOC647678             0.523   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.523   PREDICTED: similar to zinc finger protein 347 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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