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Search of human proteins with 27765093
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27765093 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform b [Homo sapiens]
(175 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506949 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i... 379 e-106
gi|27765093 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ... 379 e-106
gi|27765091 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ... 379 e-106
gi|215272345 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2... 222 1e-58
gi|26190610 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ... 222 1e-58
gi|215272347 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2... 117 5e-27
gi|13569938 sialyltransferase 7E [Homo sapiens] 35 0.033
gi|109633046 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ... 33 0.16
gi|109633044 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ... 33 0.16
gi|27765096 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [... 33 0.16
gi|4506951 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H... 33 0.16
gi|5902082 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H... 32 0.28
gi|21361444 sialytransferase 7F [Homo sapiens] 30 1.1
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens] 29 1.8
gi|21264332 sialyltransferase 7A [Homo sapiens] 29 1.8
gi|110815855 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran... 29 2.4
gi|239753018 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|239747526 PREDICTED: hypothetical protein XP_002347652 [Homo ... 28 3.1
gi|239741402 PREDICTED: hypothetical protein XP_002342162 [Homo ... 28 3.1
gi|223555955 defective in sister chromatid cohesion 1 [Homo sapi... 28 4.1
gi|192448440 sialyltransferase 7B [Homo sapiens] 28 5.3
gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit ... 27 6.9
gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit... 27 6.9
gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit... 27 6.9
gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit... 27 6.9
gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit... 27 6.9
gi|57863304 inhibitor of Bruton's tyrosine kinase [Homo sapiens] 27 6.9
>gi|4506949 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform a [Homo sapiens]
Length = 406
Score = 379 bits (973), Expect = e-106
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 60
MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ
Sbjct: 232 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 291
Query: 61 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 120
PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD
Sbjct: 292 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 351
Query: 121 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC
Sbjct: 352 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 406
>gi|27765093 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform b [Homo sapiens]
Length = 175
Score = 379 bits (973), Expect = e-106
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 60
MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ
Sbjct: 1 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 60
Query: 61 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 120
PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD
Sbjct: 61 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 120
Query: 121 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC
Sbjct: 121 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
>gi|27765091 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
isoform a [Homo sapiens]
Length = 406
Score = 379 bits (973), Expect = e-106
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 60
MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ
Sbjct: 232 MNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQ 291
Query: 61 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 120
PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD
Sbjct: 292 PFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTD 351
Query: 121 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC
Sbjct: 352 VCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 406
>gi|215272345 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform a [Homo sapiens]
Length = 529
Score = 222 bits (566), Expect = 1e-58
Identities = 93/176 (52%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 1 MNSQLVTTEKR-FLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPN 59
+NSQ++T F+ SLY + IL+ WDP+ Y +++ WY+ PDYN F Y +R+ +PN
Sbjct: 344 INSQILTNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPN 403
Query: 60 QPFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKT 119
QPFYIL P+ W+LWDI+QE + E+IQPNPPSSG +GI+IMM++C +V +YE++PS R+T
Sbjct: 404 QPFYILHPKFIWQLWDIIQENTKEKIQPNPPSSGFIGILIMMSMCREVHVYEYIPSVRQT 463
Query: 120 DVCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
++C+Y++ ++D+ACT+GAYHPLLYEK LV+ LN GT D++ GK LPGF+ +HC
Sbjct: 464 ELCHYHELYYDAACTLGAYHPLLYEKLLVQRLNMGTQGDLHRKGKVVLPGFQAVHC 519
>gi|26190610 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform a [Homo sapiens]
Length = 529
Score = 222 bits (566), Expect = 1e-58
Identities = 93/176 (52%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 1 MNSQLVTTEKR-FLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPN 59
+NSQ++T F+ SLY + IL+ WDP+ Y +++ WY+ PDYN F Y +R+ +PN
Sbjct: 344 INSQILTNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPN 403
Query: 60 QPFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKT 119
QPFYIL P+ W+LWDI+QE + E+IQPNPPSSG +GI+IMM++C +V +YE++PS R+T
Sbjct: 404 QPFYILHPKFIWQLWDIIQENTKEKIQPNPPSSGFIGILIMMSMCREVHVYEYIPSVRQT 463
Query: 120 DVCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC 175
++C+Y++ ++D+ACT+GAYHPLLYEK LV+ LN GT D++ GK LPGF+ +HC
Sbjct: 464 ELCHYHELYYDAACTLGAYHPLLYEKLLVQRLNMGTQGDLHRKGKVVLPGFQAVHC 519
>gi|215272347 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
isoform b [Homo sapiens]
Length = 466
Score = 117 bits (293), Expect = 5e-27
Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 1 MNSQLVTTEKR-FLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPN 59
+NSQ++T F+ SLY + IL+ WDP+ Y +++ WY+ PDYN F Y +R+ +PN
Sbjct: 344 INSQILTNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYIQHRQRNPN 403
Query: 60 QPFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIII 99
QPFYIL P+ W+LWDI+QE + E+IQPNPPSSG +G +
Sbjct: 404 QPFYILHPKFIWQLWDIIQENTKEKIQPNPPSSGFIGSFV 443
>gi|13569938 sialyltransferase 7E [Homo sapiens]
Length = 336
Score = 35.0 bits (79), Expect = 0.033
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 31/150 (20%)
Query: 22 ILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWELWDILQEIS 81
+ I W PS Y K +NN ++ P +++ + ++ ++ +
Sbjct: 167 VFIFWGPSSYMRRDGKG------QVYNNLHLLSQVLPRLKAFMITRHKMLQFDELFKQET 220
Query: 82 PEE--IQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTDVC----------YYYQKFF 129
++ I S+G + I + LCD++++Y +P D C +YY+ F
Sbjct: 221 GKDRKISNTWLSTGWFTMTIALELCDRINVYGMVP----PDFCRDPNHPSVPYHYYEPFG 276
Query: 130 DSACTM---------GAYHPLLYEKNLVKH 150
CTM G++H + EK + K+
Sbjct: 277 PDECTMYLSHERGRKGSHHRFITEKRVFKN 306
>gi|109633046 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
isoform 2 [Homo sapiens]
Length = 395
Score = 32.7 bits (73), Expect = 0.16
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 58 PNQP--FYILKPQMPWEL-WDILQEISPEEI----QPNPPSSGMLGIIIMMTLCDQVDIY 110
P QP F IL P + E +DILQ P+ N P+ G++ +++ LCD+V +
Sbjct: 277 PLQPKHFRILNPVIIKETAFDILQYSEPQSRFWGRDKNVPTIGVIAVVLATHLCDEVSLA 336
Query: 111 EFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYE-----KNLVKHLNQGTDEDI 159
F + +Y FDS C ++ K L+K + +G +D+
Sbjct: 337 GFGYDLNQPRTPLHY---FDSQCMAAMNFQTMHNVTTETKFLLKLVKEGVVKDL 387
>gi|109633044 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
isoform 1 [Homo sapiens]
Length = 418
Score = 32.7 bits (73), Expect = 0.16
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 58 PNQP--FYILKPQMPWEL-WDILQEISPEEI----QPNPPSSGMLGIIIMMTLCDQVDIY 110
P QP F IL P + E +DILQ P+ N P+ G++ +++ LCD+V +
Sbjct: 300 PLQPKHFRILNPVIIKETAFDILQYSEPQSRFWGRDKNVPTIGVIAVVLATHLCDEVSLA 359
Query: 111 EFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYE-----KNLVKHLNQGTDEDI 159
F + +Y FDS C ++ K L+K + +G +D+
Sbjct: 360 GFGYDLNQPRTPLHY---FDSQCMAAMNFQTMHNVTTETKFLLKLVKEGVVKDL 410
>gi|27765096 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
[Homo sapiens]
Length = 340
Score = 32.7 bits (73), Expect = 0.16
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 90 PSSGMLGIIIMMTLCDQVDIYEF 112
PS+G+L +I M +CD+VD+Y F
Sbjct: 267 PSTGILSVIFSMHVCDEVDLYGF 289
>gi|4506951 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Homo
sapiens]
Length = 340
Score = 32.7 bits (73), Expect = 0.16
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 90 PSSGMLGIIIMMTLCDQVDIYEF 112
PS+G+L +I M +CD+VD+Y F
Sbjct: 267 PSTGILSVIFSMHVCDEVDLYGF 289
>gi|5902082 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Homo
sapiens]
Length = 350
Score = 32.0 bits (71), Expect = 0.28
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 90 PSSGMLGIIIMMTLCDQVDIYEFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYEKNLVK 149
PS+GML + + +CD+V++Y F R Y+ + H +E +++
Sbjct: 277 PSTGMLVLFFALHVCDEVNVYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIID 336
Query: 150 HLNQGTDEDIY 160
L + + ++Y
Sbjct: 337 MLAKASKIEVY 347
>gi|21361444 sialytransferase 7F [Homo sapiens]
Length = 333
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 20 EGILIVWDPSVYHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWELWDILQE 79
E + I W P P Q P + + + PN Y + P + D+ +
Sbjct: 177 ETVFIFWGP-------PSKMQKPQGSLVRVIQRAGLVFPNMEAYAVSPGRMRQFDDLFRG 229
Query: 80 ISPEEIQPNPP--SSGMLGIIIMMTLCDQVDIYEFLP 114
+ ++ + + S+G ++I + LCD V +Y +P
Sbjct: 230 ETGKDREKSHSWLSTGWFTMVIAVELCDHVHVYGMVP 266
>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
Length = 519
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Query: 40 QNPDYNFFNNYKTYRKLHPNQPF--------YILKPQMPWELWDIL 77
++P + +Y + + HPNQP + LKPQ P + WDIL
Sbjct: 463 RSPGLSPLLHYPSCHRSHPNQPLSQTQSRRPHPLKPQDPSKGWDIL 508
>gi|21264332 sialyltransferase 7A [Homo sapiens]
Length = 600
Score = 29.3 bits (64), Expect = 1.8
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 90 PSSGMLGIIIMMTLCDQVDIYEFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYEKNLVK 149
P++G L ++ + LCDQV Y F+ + +YY + H E+ + K
Sbjct: 519 PTTGALLLLTALQLCDQVSAYGFITEGHERFSDHYYDTSW-KRLIFYINHDFKLEREVWK 577
Query: 150 HLNQGTDEDIYLLGKATLPG 169
L+ DE I L + PG
Sbjct: 578 RLH---DEGIIRLYQRPGPG 594
>gi|110815855 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 3 [Homo sapiens]
Length = 380
Score = 28.9 bits (63), Expect = 2.4
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 65 LKPQMPWELWDILQEISP----EEIQPNPPSSGMLGIIIMMTLCDQVDIYEFLP----SK 116
LK Q+ W +I+Q ++ + + P S+G+L + +C+++ +Y F P
Sbjct: 271 LKVQLAWP-GNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPN 329
Query: 117 RKTDVCYYY 125
+ D+ Y+Y
Sbjct: 330 TREDLPYHY 338
>gi|239753018 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 28.5 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 65 LKPQMPWELWDILQEISPEEIQPNPPSSGMLGIII 99
L+ Q+P LW L +P+++ P PP S ++ +I
Sbjct: 7 LRRQLPMVLWHRLAPENPDDLDPAPPPSMLVPRLI 41
>gi|239747526 PREDICTED: hypothetical protein XP_002347652 [Homo
sapiens]
Length = 70
Score = 28.5 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 65 LKPQMPWELWDILQEISPEEIQPNPPSSGMLGIII 99
L+ Q+P LW L +P+++ P PP S ++ +I
Sbjct: 7 LRRQLPMVLWHRLAPENPDDLDPAPPPSMLVPRLI 41
>gi|239741402 PREDICTED: hypothetical protein XP_002342162 [Homo
sapiens]
Length = 70
Score = 28.5 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 65 LKPQMPWELWDILQEISPEEIQPNPPSSGMLGIII 99
L+ Q+P LW L +P+++ P PP S ++ +I
Sbjct: 7 LRRQLPMVLWHRLAPENPDDLDPAPPPSMLVPRLI 41
>gi|223555955 defective in sister chromatid cohesion 1 [Homo
sapiens]
Length = 393
Score = 28.1 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 131 SACTMGAYHPLL---YEKNLVKHLNQGTDEDIYLLGKATL 167
+AC +G Y +L YE L+ H+ Q D + + GK L
Sbjct: 187 NACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPL 226
>gi|192448440 sialyltransferase 7B [Homo sapiens]
Length = 374
Score = 27.7 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 90 PSSGMLGIIIMMTLCDQVDIYEFLPSKRKTDVCYYYQK 127
PS+G L ++ + CDQV Y F+ S +Y+++
Sbjct: 303 PSTGALMLLTALHTCDQVSAYGFITSNYWKFSDHYFER 340
>gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 31 YHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWE 72
Y IP Y P Y TY +L P F +L WE
Sbjct: 381 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 422
>gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 31 YHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWE 72
Y IP Y P Y TY +L P F +L WE
Sbjct: 381 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 422
>gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 31 YHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWE 72
Y IP Y P Y TY +L P F +L WE
Sbjct: 406 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 447
>gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 31 YHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWE 72
Y IP Y P Y TY +L P F +L WE
Sbjct: 406 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 447
>gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 1 [Homo sapiens]
Length = 596
Score = 27.3 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 31 YHSDIPKWYQNPDYNFFNNYKTYRKLHPNQPFYILKPQMPWE 72
Y IP Y P Y TY +L P F +L WE
Sbjct: 440 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE 481
>gi|57863304 inhibitor of Bruton's tyrosine kinase [Homo sapiens]
Length = 1353
Score = 27.3 bits (59), Expect = 6.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 36 PKWYQNPDYNF-FNNYKTYRKLHP----NQPFYILKPQMPWELWDILQEISPEEIQPN 88
P+ Q+PD+ F++ K K+ P P Y + PWE IL+ +P+ I N
Sbjct: 1040 PRDLQSPDFTTGFHSDKIEAKVKPYVNGTSPVYSREDLKPWEKSPILKISAPQPIPSN 1097
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,653,067
Number of Sequences: 37866
Number of extensions: 351466
Number of successful extensions: 676
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 656
Number of HSP's gapped (non-prelim): 27
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.