Guide to the Human Genome
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Name: ST6GALNAC6 Sequence: fasta or formatted (333aa) NCBI GI: 21361444
Description:

sialytransferase 7F

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         14           1
 C cysteine            2.4          8           1
 D aspartate           2.4          8           2
 E glutamate           5.1         17           1
 F phenylalanine       4.2         14           1
 G glycine             6.3         21           1
 H histidine           3.9         13           2
 I isoleucine          4.5         15           1
 K lysine              3.9         13           2
 L leucine             6.6         22           2
 M methionine          2.7          9           1
 N asparagine          3.6         12           1
 P proline             8.1         27           2
 Q glutamine           3.6         12           1
 R arginine            9.6         32           4
 S serine              9.9         33           4
 T threonine           5.7         19           2
 V valine              7.5         25           2
 W tryptophan          1.8          6           1
 Y tyrosine            3.9         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialytransferase 7F 
ST6GALNAC5            0.382   sialyltransferase 7E 
ST6GALNAC3            0.289   sialyltransferase 7C isoform 1 
ST6GALNAC4            0.274   sialyltransferase 7D isoform a 
ST6GALNAC4            0.251   sialyltransferase 7D isoform b 
ST6GALNAC3            0.134   sialyltransferase 7C isoform 2 
ST6GAL1               0.071   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.071   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GAL2               0.070   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.070   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST3GAL1               0.065   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.065   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL4               0.057   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST8SIA3               0.055   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST3GAL2               0.052   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST6GAL2               0.049   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST3GAL5               0.040   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.040   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL3               0.040   sialyltransferase 6 isoform i 
ST3GAL3               0.040   sialyltransferase 6 isoform g 
ST3GAL3               0.040   sialyltransferase 6 isoform f 
ST3GAL3               0.040   sialyltransferase 6 isoform d 
ST3GAL3               0.040   sialyltransferase 6 isoform b 
ST3GAL3               0.040   sialyltransferase 6 isoform a 
ST3GAL3               0.040   sialyltransferase 6 isoform j 
ST3GAL6               0.036   alpha2,3-sialyltransferase VI 
ST8SIA4               0.036   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA6               0.034   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST8SIA1               0.033   alpha-2,8-sialyltransferase 1 
ST6GALNAC2            0.028   sialyltransferase 7B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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