Guide to the Human Genome
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Name: ST6GAL1 Sequence: fasta or formatted (175aa) NCBI GI: 27765093
Description:

ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform b

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [406aa] ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform a
alt prot [406aa] ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          3           1
 C cysteine            2.3          4           1
 D aspartate           6.3         11           1
 E glutamate           5.1          9           2
 F phenylalanine       4.6          8           2
 G glycine             4.0          7           1
 H histidine           2.9          5           1
 I isoleucine          7.4         13           3
 K lysine              6.9         12           1
 L leucine            10.3         18           2
 M methionine          3.4          6           2
 N asparagine          5.7         10           2
 P proline             8.0         14           2
 Q glutamine           5.1          9           1
 R arginine            2.3          4           1
 S serine              5.1          9           2
 T threonine           5.1          9           2
 V valine              3.4          6           1
 W tryptophan          2.3          4           1
 Y tyrosine            8.0         14           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ... 
ST6GAL1               1.000   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               1.000   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GAL2               0.556   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.556   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST6GAL2               0.260   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GALNAC5            0.028   sialyltransferase 7E 
ST3GAL5               0.023   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.023   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL1               0.023   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.023   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL2               0.020   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST6GALNAC6            0.014   sialytransferase 7F 
TTC31                 0.011   tetratricopeptide repeat domain 31 
ST6GALNAC1            0.011   sialyltransferase 7A 
ST8SIA3               0.011   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
LOC100293757          0.008   PREDICTED: hypothetical protein 
LOC100290662          0.008   PREDICTED: hypothetical protein XP_002347652 
LOC100287850          0.008   PREDICTED: hypothetical protein XP_002342162 
DSCC1                 0.008   defective in sister chromatid cohesion 1 
ST6GALNAC2            0.008   sialyltransferase 7B 
PDP1                  0.006   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.006   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.006   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.006   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.006   pyruvate dehyrogenase phosphatase catalytic subunit...
IBTK                  0.006   inhibitor of Bruton's tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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