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Name: ST6GAL1 Sequence: fasta or formatted (406aa) NCBI GI: 4506949
Description:

ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform a

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [406aa] ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform a
alt prot [175aa] ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         16           1
 C cysteine            2.2          9           2
 D aspartate           5.2         21           2
 E glutamate           4.4         18           2
 F phenylalanine       4.7         19           2
 G glycine             5.7         23           1
 H histidine           2.5         10           1
 I isoleucine          5.2         21           3
 K lysine              9.1         37           3
 L leucine             9.6         39           2
 M methionine          2.5         10           2
 N asparagine          4.7         19           2
 P proline             5.7         23           2
 Q glutamine           4.7         19           2
 R arginine            3.7         15           1
 S serine              8.9         36           4
 T threonine           4.9         20           2
 V valine              5.4         22           2
 W tryptophan          2.2          9           1
 Y tyrosine            4.9         20           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i... 
ST6GAL1               1.000   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GAL1               0.432   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GAL2               0.372   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.372   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST6GAL2               0.243   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GALNAC6            0.059   sialytransferase 7F 
ST6GALNAC5            0.059   sialyltransferase 7E 
ST3GAL2               0.054   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST8SIA3               0.052   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST3GAL5               0.050   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.050   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL1               0.049   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.049   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL6               0.049   alpha2,3-sialyltransferase VI 
ST3GAL4               0.046   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST6GALNAC2            0.044   sialyltransferase 7B 
ST8SIA4               0.043   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA6               0.043   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST8SIA2               0.043   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST6GALNAC1            0.041   sialyltransferase 7A 
ST3GAL3               0.041   sialyltransferase 6 isoform i 
ST3GAL3               0.041   sialyltransferase 6 isoform g 
ST3GAL3               0.041   sialyltransferase 6 isoform f 
ST3GAL3               0.041   sialyltransferase 6 isoform d 
ST3GAL3               0.041   sialyltransferase 6 isoform b 
ST3GAL3               0.041   sialyltransferase 6 isoform a 
ST3GAL3               0.041   sialyltransferase 6 isoform j 
ST6GALNAC4            0.041   sialyltransferase 7D isoform a 
ST6GALNAC3            0.039   sialyltransferase 7C isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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