Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ST8SIA3 Sequence: fasta or formatted (380aa) NCBI GI: 110815855
Description:

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         19           1
 C cysteine            1.6          6           1
 D aspartate           3.4         13           1
 E glutamate           3.7         14           2
 F phenylalanine       7.4         28           3
 G glycine             4.7         18           1
 H histidine           3.9         15           1
 I isoleucine          5.3         20           1
 K lysine              6.8         26           2
 L leucine            11.1         42           2
 M methionine          2.6         10           1
 N asparagine          5.8         22           2
 P proline             4.5         17           1
 Q glutamine           4.5         17           1
 R arginine            4.7         18           1
 S serine              7.6         29           2
 T threonine           6.3         24           2
 V valine              5.3         20           2
 W tryptophan          1.6          6           1
 Y tyrosine            4.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran... 
ST8SIA2               0.280   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA4               0.256   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA6               0.207   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST8SIA1               0.187   alpha-2,8-sialyltransferase 1 
ST8SIA5               0.154   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST8SIA4               0.086   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST6GALNAC1            0.073   sialyltransferase 7A 
ST3GAL1               0.071   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.071   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL5               0.066   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.066   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST6GALNAC5            0.066   sialyltransferase 7E 
ST6GALNAC4            0.065   sialyltransferase 7D isoform a 
ST3GAL2               0.063   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST6GALNAC2            0.061   sialyltransferase 7B 
ST6GAL1               0.057   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.057   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GAL2               0.049   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.049   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST6GALNAC6            0.049   sialytransferase 7F 
ST6GALNAC3            0.047   sialyltransferase 7C isoform 1 
ST3GAL6               0.045   alpha2,3-sialyltransferase VI 
ST3GAL4               0.045   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST6GALNAC4            0.041   sialyltransferase 7D isoform b 
ST6GAL2               0.040   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST3GAL3               0.040   sialyltransferase 6 isoform i 
ST3GAL3               0.040   sialyltransferase 6 isoform g 
ST3GAL3               0.040   sialyltransferase 6 isoform f 
ST3GAL3               0.040   sialyltransferase 6 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press