Guide to the Human Genome
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Name: ST6GALNAC5 Sequence: fasta or formatted (336aa) NCBI GI: 13569938
Description:

sialyltransferase 7E

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         15           2
 C cysteine            2.4          8           1
 D aspartate           4.5         15           1
 E glutamate           3.6         12           1
 F phenylalanine       4.2         14           2
 G glycine             6.8         23           2
 H histidine           4.8         16           2
 I isoleucine          3.9         13           1
 K lysine              4.5         15           1
 L leucine             8.9         30           3
 M methionine          3.3         11           1
 N asparagine          3.9         13           2
 P proline             6.5         22           2
 Q glutamine           7.7         26          12
 R arginine            7.7         26           2
 S serine              7.4         25           2
 T threonine           6.0         20           2
 V valine              5.1         17           1
 W tryptophan          1.5          5           1
 Y tyrosine            3.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialyltransferase 7E 
ST6GALNAC6            0.378   sialytransferase 7F 
ST6GALNAC4            0.329   sialyltransferase 7D isoform a 
ST6GALNAC3            0.294   sialyltransferase 7C isoform 1 
ST6GALNAC4            0.279   sialyltransferase 7D isoform b 
ST6GALNAC3            0.154   sialyltransferase 7C isoform 2 
ST6GAL2               0.078   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.078   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST8SIA3               0.074   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST6GAL1               0.071   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.071   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST8SIA2               0.069   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST6GAL2               0.063   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST8SIA4               0.059   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST3GAL4               0.054   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST3GAL2               0.053   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST3GAL1               0.051   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.051   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL3               0.051   sialyltransferase 6 isoform i 
ST3GAL3               0.051   sialyltransferase 6 isoform g 
ST3GAL3               0.051   sialyltransferase 6 isoform f 
ST3GAL3               0.051   sialyltransferase 6 isoform b 
ST3GAL3               0.051   sialyltransferase 6 isoform a 
ST3GAL3               0.051   sialyltransferase 6 isoform j 
ST3GAL5               0.049   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.049   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST8SIA1               0.046   alpha-2,8-sialyltransferase 1 
ST3GAL3               0.046   sialyltransferase 6 isoform d 
ST8SIA6               0.044   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST6GALNAC2            0.040   sialyltransferase 7B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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