Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ST3GAL5 Sequence: fasta or formatted (418aa) NCBI GI: 109633044
Description:

ST3 beta-galactoside alpha-2,3-sialyltransferase 5 isoform 1

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids
Protein Glycosylation

Other entries for this name:
alt prot [395aa] ST3 beta-galactoside alpha-2,3-sialyltransferase 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         28           4
 C cysteine            2.2          9           1
 D aspartate           4.8         20           1
 E glutamate           6.0         25           2
 F phenylalanine       5.3         22           2
 G glycine             4.5         19           2
 H histidine           2.9         12           1
 I isoleucine          3.6         15           2
 K lysine              7.9         33           2
 L leucine            11.2         47           3
 M methionine          2.6         11           1
 N asparagine          2.6         11           1
 P proline             6.0         25           2
 Q glutamine           4.3         18           2
 R arginine            5.7         24           2
 S serine              5.5         23           2
 T threonine           5.5         23           2
 V valine              7.4         31           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ... 
ST3GAL5               0.934   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL3               0.248   sialyltransferase 6 isoform i 
ST3GAL3               0.248   sialyltransferase 6 isoform f 
ST3GAL3               0.248   sialyltransferase 6 isoform a 
ST3GAL3               0.248   sialyltransferase 6 isoform g 
ST3GAL3               0.247   sialyltransferase 6 isoform b 
ST3GAL3               0.247   sialyltransferase 6 isoform j 
ST3GAL6               0.172   alpha2,3-sialyltransferase VI 
ST3GAL4               0.166   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST3GAL3               0.119   sialyltransferase 6 isoform d 
ST3GAL2               0.081   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST3GAL1               0.078   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.078   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST6GALNAC1            0.066   sialyltransferase 7A 
ST8SIA3               0.060   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST8SIA2               0.058   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST6GALNAC2            0.053   sialyltransferase 7B 
ST6GAL2               0.051   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.051   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST8SIA4               0.049   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST6GAL1               0.049   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.049   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST6GALNAC5            0.040   sialyltransferase 7E 
ST6GAL2               0.039   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GALNAC6            0.033   sialytransferase 7F 
ST6GALNAC4            0.030   sialyltransferase 7D isoform a 
ST8SIA5               0.029   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST6GALNAC3            0.025   sialyltransferase 7C isoform 1 
ST6GALNAC3            0.025   sialyltransferase 7C isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press