Guide to the Human Genome
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Name: MPPED1 Sequence: fasta or formatted (326aa) NCBI GI: 113204627
Description:

metallophosphoesterase domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         15           2
 C cysteine            1.5          5           1
 D aspartate           4.9         16           1
 E glutamate           4.9         16           1
 F phenylalanine       4.9         16           1
 G glycine             6.7         22           1
 H histidine           3.7         12           1
 I isoleucine          4.9         16           2
 K lysine              3.4         11           2
 L leucine             8.6         28           2
 M methionine          2.5          8           1
 N asparagine          4.6         15           1
 P proline             8.6         28           2
 Q glutamine           5.2         17           1
 R arginine            4.9         16           2
 S serine              5.5         18           2
 T threonine           4.9         16           3
 V valine              8.6         28           1
 W tryptophan          2.5          8           1
 Y tyrosine            4.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallophosphoesterase domain containing 1 
MPPED2                0.740   metallophosphoesterase domain containing 2 isoform 1 ...
MPPED2                0.647   metallophosphoesterase domain containing 2 isoform ...
C2orf61               0.008   hypothetical protein LOC285051 
ZNF804B               0.006   zinc finger protein 804B 
RBBP8                 0.006   retinoblastoma binding protein 8 isoform b 
RBBP8                 0.006   retinoblastoma binding protein 8 isoform a 
RBBP8                 0.006   retinoblastoma binding protein 8 isoform a 
ACTRT2                0.005   actin-related protein M2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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