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Search of human proteins with 27312027
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27312027 F-box only protein 16 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27312027 F-box only protein 16 [Homo sapiens] 615 e-176
gi|118150678 epithelial cell transforming sequence 2 oncogene-li... 162 2e-40
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 65 7e-11
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 65 7e-11
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 65 7e-11
gi|118402584 F-box and WD repeat domain containing 2 [Homo sapiens] 48 1e-05
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 47 2e-05
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 47 2e-05
gi|48928050 F-box and WD repeat domain containing 11 isoform C [... 46 4e-05
gi|48928048 F-box and WD repeat domain containing 11 isoform A [... 46 4e-05
gi|48928046 F-box and WD repeat domain containing 11 isoform B [... 46 4e-05
gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 44 2e-04
gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 44 2e-04
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 43 3e-04
gi|30520327 F-box protein 27 [Homo sapiens] 42 6e-04
gi|4502477 beta-transducin repeat containing protein isoform 2 [... 42 8e-04
gi|16117783 beta-transducin repeat containing protein isoform 1 ... 42 8e-04
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 42 8e-04
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 41 0.001
gi|8922188 F-box only protein 6 [Homo sapiens] 41 0.001
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 40 0.002
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 40 0.002
gi|15812198 F-box only protein 2 [Homo sapiens] 39 0.007
gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens] 38 0.009
gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens] 38 0.009
gi|67003566 F-box protein 48 [Homo sapiens] 38 0.012
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 37 0.027
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 37 0.027
gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens] 37 0.027
gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens] 37 0.027
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 615 bits (1586), Expect = e-176
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MMAFAPPKNTDGPKMQTKMSTWTPLNHQLLNDRVFEERRALLGKWFDKWTDSQRRRILTG 60
MMAFAPPKNTDGPKMQTKMSTWTPLNHQLLNDRVFEERRALLGKWFDKWTDSQRRRILTG
Sbjct: 1 MMAFAPPKNTDGPKMQTKMSTWTPLNHQLLNDRVFEERRALLGKWFDKWTDSQRRRILTG 60
Query: 61 LLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWK 120
LLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWK
Sbjct: 61 LLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWK 120
Query: 121 NLAELDQLWMLKCLRFNWYINFSPTPFEQGIWKKHYIQMVKELHITKPKTPPKDGFVIAD 180
NLAELDQLWMLKCLRFNWYINFSPTPFEQGIWKKHYIQMVKELHITKPKTPPKDGFVIAD
Sbjct: 121 NLAELDQLWMLKCLRFNWYINFSPTPFEQGIWKKHYIQMVKELHITKPKTPPKDGFVIAD 180
Query: 181 VQLVTSNSPEEKQSPLSAFRSSSSLRKKNNSGEKALPPWRSSDKHPTDIIRFNYLDNRDP 240
VQLVTSNSPEEKQSPLSAFRSSSSLRKKNNSGEKALPPWRSSDKHPTDIIRFNYLDNRDP
Sbjct: 181 VQLVTSNSPEEKQSPLSAFRSSSSLRKKNNSGEKALPPWRSSDKHPTDIIRFNYLDNRDP 240
Query: 241 METVQQGRRKRNQMTPDFSRQSHDKKNKLQDRTRLRKAQSMMSRRNPFPLCP 292
METVQQGRRKRNQMTPDFSRQSHDKKNKLQDRTRLRKAQSMMSRRNPFPLCP
Sbjct: 241 METVQQGRRKRNQMTPDFSRQSHDKKNKLQDRTRLRKAQSMMSRRNPFPLCP 292
>gi|118150678 epithelial cell transforming sequence 2 oncogene-like
[Homo sapiens]
Length = 904
Score = 162 bits (411), Expect = 2e-40
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 16/213 (7%)
Query: 17 TKMSTWTPLNHQLLNDRVFEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRK 76
T+ S WTP +++ LN ++F+ER AL+ WFD WT+ QR+ L + RC+ SQ +F
Sbjct: 6 TRFSAWTPFSNKSLNRQLFQERVALISHWFDLWTNKQRQEFLFAIFLRCTKSQLRFVQDW 65
Query: 77 LQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRF 136
E++ +DF+T LPR +SLYIFSFL P+ LC AQV W WK L E D LWM KC++F
Sbjct: 66 FSERMQVAKVDFSTVLPRFISLYIFSFLSPKDLCAAAQVSWPWKFLTEQDCLWMPKCVKF 125
Query: 137 NWYINFSPTPFEQGIWKKHYIQMVKELHITKPKTPPKDGFVIADVQLVTSNSPEEKQSPL 196
W++ ++PT E G WK+HYI V L P+ A T N P+ + L
Sbjct: 126 GWFLPYTPTDNEYGAWKRHYIACVSHLDWLTPRE--------AAATYGTLNEPKTEDEEL 177
Query: 197 SAFRSSSSLRK--------KNNSGEKALPPWRS 221
+ LRK + K PPW S
Sbjct: 178 LERQREKCLRKRIWEKIALRKKELFKVRPPWVS 210
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 65.1 bits (157), Expect = 7e-11
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 44 KWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSF 103
K F W+ ++ L L++ C +Q K + ++ P DF + LP+ L+LY+ SF
Sbjct: 121 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIE---PQFQRDFISLLPKELALYVLSF 177
Query: 104 LDPRSLCRCAQVCWHWKNLAELDQLWMLKC 133
L+P+ L + AQ C +W+ LAE + LW KC
Sbjct: 178 LEPKDLLQAAQTCRYWRILAEDNLLWREKC 207
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 65.1 bits (157), Expect = 7e-11
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 44 KWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSF 103
K F W+ ++ L L++ C +Q K + ++ P DF + LP+ L+LY+ SF
Sbjct: 239 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIE---PQFQRDFISLLPKELALYVLSF 295
Query: 104 LDPRSLCRCAQVCWHWKNLAELDQLWMLKC 133
L+P+ L + AQ C +W+ LAE + LW KC
Sbjct: 296 LEPKDLLQAAQTCRYWRILAEDNLLWREKC 325
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 65.1 bits (157), Expect = 7e-11
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 44 KWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSF 103
K F W+ ++ L L++ C +Q K + ++ P DF + LP+ L+LY+ SF
Sbjct: 159 KMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIE---PQFQRDFISLLPKELALYVLSF 215
Query: 104 LDPRSLCRCAQVCWHWKNLAELDQLWMLKC 133
L+P+ L + AQ C +W+ LAE + LW KC
Sbjct: 216 LEPKDLLQAAQTCRYWRILAEDNLLWREKC 245
>gi|118402584 F-box and WD repeat domain containing 2 [Homo sapiens]
Length = 454
Score = 47.8 bits (112), Expect = 1e-05
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 50 TDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSL 109
TD Q+ L L+ Q + L+ + DF LP LS Y+ +LDP++L
Sbjct: 21 TDLQKNETLDHLISLSGAVQLRHLSNNLETLLKR---DFLKLLPLELSFYLLKWLDPQTL 77
Query: 110 CRCAQVCWHW-KNLAELDQLWMLKCLRFNWYINFSPTPFEQGIWKKHYIQMV 160
C V W K ++ ++W C W I+ S + WKK Y++ +
Sbjct: 78 LTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQ--DALHWKKVYLKAI 127
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 47.4 bits (111), Expect = 2e-05
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 69 QQKFCCRKLQEKIPAEA-----LDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLA 123
+QKF + EK EA T LP + L IFS+L+P+ LCRC+QV W L
Sbjct: 54 RQKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLT 113
Query: 124 ELDQLWM----LKCLRFNWY 139
+ LW + R +WY
Sbjct: 114 KTGSLWKHLYPVHWARGDWY 133
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 47.4 bits (111), Expect = 2e-05
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 69 QQKFCCRKLQEKIPAEA-----LDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLA 123
+QKF + EK EA T LP + L IFS+L+P+ LCRC+QV W L
Sbjct: 180 RQKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLT 239
Query: 124 ELDQLWM----LKCLRFNWY 139
+ LW + R +WY
Sbjct: 240 KTGSLWKHLYPVHWARGDWY 259
>gi|48928050 F-box and WD repeat domain containing 11 isoform C
[Homo sapiens]
Length = 542
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 35 FEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPR 94
+++ + L K+FD+W++S + + L+ R Q L+ P DF T LP
Sbjct: 69 YQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLK---PMLQRDFITALPE 125
Query: 95 V----LSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
++ I S+LD RSLC VC W+ + LW
Sbjct: 126 QGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLW 164
>gi|48928048 F-box and WD repeat domain containing 11 isoform A
[Homo sapiens]
Length = 508
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 35 FEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPR 94
+++ + L K+FD+W++S + + L+ R Q L+ P DF T LP
Sbjct: 35 YQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLK---PMLQRDFITALPE 91
Query: 95 V----LSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
++ I S+LD RSLC VC W+ + LW
Sbjct: 92 QGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLW 130
>gi|48928046 F-box and WD repeat domain containing 11 isoform B
[Homo sapiens]
Length = 529
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 35 FEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPR 94
+++ + L K+FD+W++S + + L+ R Q L+ P DF T LP
Sbjct: 56 YQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLK---PMLQRDFITALPE 112
Query: 95 V----LSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
++ I S+LD RSLC VC W+ + LW
Sbjct: 113 QGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLW 151
>gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [Homo
sapiens]
Length = 532
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 88 FTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKC 133
F +LP L++ IF +LD + L RCAQV WK +AE + LW C
Sbjct: 49 FDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLC 94
>gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo
sapiens]
Length = 598
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 88 FTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKC 133
F +LP L++ IF +LD + L RCAQV WK +AE + LW C
Sbjct: 115 FDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLC 160
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
+LP + IFSFL LCRCA+VC W NLA +LW
Sbjct: 116 RLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLW 154
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 42.0 bits (97), Expect = 6e-04
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 79 EKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWML 131
E P EALD + +LP L L + S + PR+L RC QVC W+ L + LW+L
Sbjct: 17 EPEPEEALDLS-QLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLL 69
>gi|4502477 beta-transducin repeat containing protein isoform 2
[Homo sapiens]
Length = 569
Score = 41.6 bits (96), Expect = 8e-04
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 35 FEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPR 94
+E+ + L K+F++W++S + + L+ + Q L+ P DF T LP
Sbjct: 94 YEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLK---PMLQRDFITALPA 150
Query: 95 V----LSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
++ I S+LD +SLC VC W + LW
Sbjct: 151 RGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLW 189
>gi|16117783 beta-transducin repeat containing protein isoform 1
[Homo sapiens]
Length = 605
Score = 41.6 bits (96), Expect = 8e-04
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 35 FEERRALLGKWFDKWTDSQRRRILTGLLERCSLSQQKFCCRKLQEKIPAEALDFTTKLPR 94
+E+ + L K+F++W++S + + L+ + Q L+ P DF T LP
Sbjct: 130 YEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLK---PMLQRDFITALPA 186
Query: 95 V----LSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129
++ I S+LD +SLC VC W + LW
Sbjct: 187 RGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLW 225
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 41.6 bits (96), Expect = 8e-04
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLA 123
KLP+ L L IFSFLD +LCRCAQV W LA
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLA 59
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYIN 141
KLP+ L L IFSFLD +LCRCAQ+ W LA W L FN+ I+
Sbjct: 14 KLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDL-FNFQID 63
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 85 ALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKCLRFNWYINFS 143
ALD +LP + L +F+ + R L C VC W++L +L LW KCLR +
Sbjct: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
Query: 144 PTPFEQGIWKKHYIQMVKELHITKPKTP 171
P WK Y ++ LH + P
Sbjct: 69 DQPVAD--WKIFY--FLRSLHRNLLRNP 92
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYINFSPTPFEQG 150
+LP + IFSFLD L + +QV HW +A+ D LW L+ NF+
Sbjct: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63
Query: 151 IWKKHYI-QMVKELHI 165
WK+ ++ Q KEL +
Sbjct: 64 TWKQFFLHQRRKELRL 79
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYINFSPTPFEQG 150
+LP + IFSFLD L + +QV HW +A+ D LW L+ NF+
Sbjct: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63
Query: 151 IWKKHYI-QMVKELHI 165
WK+ ++ Q KEL +
Sbjct: 64 TWKQFFLHQRRKELRL 79
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 38.5 bits (88), Expect = 0.007
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 78 QEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCR-CAQVCWHWKNLAELDQLWMLKC 133
QE+ A A + +LP L L + + L L + C VC WK L + LW+LKC
Sbjct: 36 QEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKC 92
>gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens]
Length = 307
Score = 38.1 bits (87), Expect = 0.009
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 66 SLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAEL 125
S+S+++ +E++ EA T+LP + LYI SFL P LC+ +W
Sbjct: 37 SVSKERVARTTSREEVD-EAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRD 95
Query: 126 DQLWMLKCLR 135
LW LR
Sbjct: 96 PILWRYFLLR 105
>gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens]
Length = 387
Score = 38.1 bits (87), Expect = 0.009
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 66 SLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAEL 125
S+S+++ +E++ EA T+LP + LYI SFL P LC+ +W
Sbjct: 37 SVSKERVARTTSREEVD-EAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRD 95
Query: 126 DQLWMLKCLR 135
LW LR
Sbjct: 96 PILWRYFLLR 105
>gi|67003566 F-box protein 48 [Homo sapiens]
Length = 155
Score = 37.7 bits (86), Expect = 0.012
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 87 DFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKN-LAELDQLWMLKCL 134
+F LP ++ IFS LD RSLCR + C W + + D LW C+
Sbjct: 33 NFFELLPAEITFKIFSQLDIRSLCRASLTCRSWNDTIRNSDSLWKPHCM 81
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 36.6 bits (83), Expect = 0.027
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 75 RKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKC 133
R + ++PA+ LP L + + S + PRSL RC VC W+++ + +W+L+
Sbjct: 13 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQL 72
Query: 134 LR 135
R
Sbjct: 73 AR 74
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 36.6 bits (83), Expect = 0.027
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 75 RKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKC 133
R + ++PA+ LP L + + S + PRSL RC VC W+++ + +W+L+
Sbjct: 4 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQL 63
Query: 134 LR 135
R
Sbjct: 64 AR 65
>gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]
Length = 471
Score = 36.6 bits (83), Expect = 0.027
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 92 LPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYINFSPTPFEQGI 151
LP L I SFLD R L C V L+ D LW C ++ W I+ +
Sbjct: 16 LPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY-WLISEEEKTQKNQC 74
Query: 152 WKKHYIQMVKEL 163
WK +I ++
Sbjct: 75 WKSLFIDTYSDV 86
>gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens]
Length = 415
Score = 36.6 bits (83), Expect = 0.027
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 92 LPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYINFSPTPFEQGI 151
LP L I SFLD R L C V L+ D LW C ++ W I+ +
Sbjct: 16 LPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY-WLISEEEKTQKNQC 74
Query: 152 WKKHYIQMVKEL 163
WK +I ++
Sbjct: 75 WKSLFIDTYSDV 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,444,310
Number of Sequences: 37866
Number of extensions: 564980
Number of successful extensions: 1620
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1532
Number of HSP's gapped (non-prelim): 94
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.