Search of human proteins with 25952144

Search of human proteins with 25952144

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25952144 tumor necrosis factor ligand superfamily, member 14
isoform 1 precursor [Homo sapiens]
         (240 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25952144 tumor necrosis factor ligand superfamily, member 14 ...   486   e-138
gi|25952147 tumor necrosis factor ligand superfamily, member 14 ...   395   e-110
gi|4557329 fas ligand [Homo sapiens]                                   82   4e-16
gi|23510445 tumor necrosis factor (ligand) superfamily, member 1...    74   9e-14
gi|25952111 tumor necrosis factor alpha [Homo sapiens]                 67   1e-11
gi|4505035 lymphotoxin-beta isoform a [Homo sapiens]                   60   2e-09
gi|4507593 tumor necrosis factor (ligand) superfamily, member 10...    57   2e-08
gi|4507609 tumor necrosis factor (ligand) superfamily, member 9 ...    47   1e-05
gi|14790152 tumor necrosis factor ligand superfamily, member 11 ...    47   2e-05
gi|4507595 tumor necrosis factor ligand superfamily, member 11 i...    47   2e-05
gi|6806893 lymphotoxin alpha precursor [Homo sapiens]                  45   4e-05
gi|229092381 lymphotoxin alpha precursor [Homo sapiens]                45   4e-05
gi|4557433 CD40 ligand [Homo sapiens]                                  33   0.29 
gi|39812447 3-oxo-5 alpha-steroid 4-dehydrogenase 2 [Homo sapiens]     28   5.4  
gi|253795514 choline phosphate cytidylyltransferase 1 beta isofo...    28   7.1  
gi|21361202 choline phosphate cytidylyltransferase 1 beta isofor...    28   7.1  
gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo ...    28   7.1  
gi|239756155 PREDICTED: hypothetical protein [Homo sapiens]            28   9.2  
gi|4507597 tumor necrosis factor (ligand) superfamily, member 12...    28   9.2  

>gi|25952144 tumor necrosis factor ligand superfamily, member 14
           isoform 1 precursor [Homo sapiens]
          Length = 240

 Score =  486 bits (1252), Expect = e-138
 Identities = 240/240 (100%), Positives = 240/240 (100%)

Query: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ 60
           MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ
Sbjct: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ 60

Query: 61  LHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 120
           LHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL
Sbjct: 61  LHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 120

Query: 121 AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 180
           AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL
Sbjct: 121 AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 180

Query: 181 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240
           VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV
Sbjct: 181 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240


>gi|25952147 tumor necrosis factor ligand superfamily, member 14
           isoform 2 [Homo sapiens]
          Length = 204

 Score =  395 bits (1014), Expect = e-110
 Identities = 203/240 (84%), Positives = 204/240 (85%), Gaps = 36/240 (15%)

Query: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ 60
           MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVAR                       
Sbjct: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVAR----------------------- 37

Query: 61  LHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 120
                        DGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL
Sbjct: 38  -------------DGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 84

Query: 121 AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 180
           AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL
Sbjct: 85  AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 144

Query: 181 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240
           VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGE+VVVRVLDERLVRLRDGTRSYFGAFMV
Sbjct: 145 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204


>gi|4557329 fas ligand [Homo sapiens]
          Length = 281

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 19/203 (9%)

Query: 42  LLLLLMGAGLAVQGWFLLQLHW-RLGEMVTRLPDGPAGSWEQLIQER----RSHEVNPAA 96
           +L+ L+G GL +   F LQ     L E  +++    A S E+ I          E+   A
Sbjct: 90  VLVALVGLGLGMFQLFHLQKELAELRESTSQMHT--ASSLEKQIGHPSPPPEKKELRKVA 147

Query: 97  HLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPL 156
           HLTG ++S +    PL WE   G+  L G+ Y  G LV+ + G Y++YSKV   G  C  
Sbjct: 148 HLTGKSNSRSM---PLEWEDTYGIVLLSGVKYKKGGLVINETGLYFVYSKVYFRGQSCN- 203

Query: 157 GLASTITHGLYKRTPRYPEELELLVSQ-QSPCGRATSSSRVWWDSSFLGGVVHLEAGEKV 215
                ++H +Y R  +YP++L ++  +  S C    ++ ++W  SS+LG V +L + + +
Sbjct: 204 --NLPLSHKVYMRNSKYPQDLVMMEGKMMSYC----TTGQMWARSSYLGAVFNLTSADHL 257

Query: 216 VVRVLDERLVRLRDGTRSYFGAF 238
            V V +  LV   + ++++FG +
Sbjct: 258 YVNVSELSLVNFEE-SQTFFGLY 279


>gi|23510445 tumor necrosis factor (ligand) superfamily, member 15
           [Homo sapiens]
          Length = 251

 Score = 74.3 bits (181), Expect = 9e-14
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 27/215 (12%)

Query: 41  GLLLLLMGAGLAVQGWFLLQLHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTG 100
           GL   L+ + L  QG   +Q     G+         A S +Q+    R+    P AHLT 
Sbjct: 49  GLTTYLLVSQLRAQGEACVQFQALKGQEF-------APSHQQVYAPLRADGDKPRAHLTV 101

Query: 101 ANSSLT----GSGGPLLWETQLGLAFLRG-LSYHDGALVVTKAGYYYIYSKVQLGGV--- 152
              + T         L WE +LGLAF +  ++Y +  L++ ++G Y+IYS+V   G+   
Sbjct: 102 VRQTPTQHFKNQFPALHWEHELGLAFTKNRMNYTNKFLLIPESGDYFIYSQVTFRGMTSE 161

Query: 153 -------GCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGG 205
                  G P     +IT  + K T  YPE  +LL+  +S C   ++    W+   +LG 
Sbjct: 162 CSEIRQAGRP-NKPDSITVVITKVTDSYPEPTQLLMGTKSVCEVGSN----WFQPIYLGA 216

Query: 206 VVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240
           +  L+ G+K++V V D  LV      +++FGAF++
Sbjct: 217 MFSLQEGDKLMVNVSDISLVDYTKEDKTFFGAFLL 251


>gi|25952111 tumor necrosis factor alpha [Homo sapiens]
          Length = 233

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 88  RSHEVNPAAHLTGANSSLTGSGGPLLWETQLGLAFL-RGLSYHDGALVVTKAGYYYIYSK 146
           R+    P AH+  AN    G    L W  +   A L  G+   D  LVV   G Y IYS+
Sbjct: 82  RTPSDKPVAHVV-ANPQAEGQ---LQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQ 137

Query: 147 VQLGGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRAT---SSSRVWWDSSFL 203
           V   G GCP      +TH + +    Y  ++ LL + +SPC R T   + ++ W++  +L
Sbjct: 138 VLFKGQGCP-STHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYL 196

Query: 204 GGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFG 236
           GGV  LE G+++   +     +   +  + YFG
Sbjct: 197 GGVFQLEKGDRLSAEINRPDYLDFAESGQVYFG 229


>gi|4505035 lymphotoxin-beta isoform a [Homo sapiens]
          Length = 244

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 74/241 (30%), Positives = 106/241 (43%), Gaps = 29/241 (12%)

Query: 23  RLGRSHRRQSCSVARVGL-GLLLLLMGAGLAVQGWFLLQLHWRLGEMVTRLPDGPAGS-- 79
           R GR   R S  +A  G   L+ LL+   + V     L +    G +VT   D  A +  
Sbjct: 9   RGGRLQGRGSLLLAVAGATSLVTLLLAVPITVLAVLAL-VPQDQGGLVTETADPGAQAQQ 67

Query: 80  ---WEQLIQERRSHEVNP---AAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDG- 131
              +++L +E    +++P   AAHL GA   L G G  L WET    AFL  G  + D  
Sbjct: 68  GLGFQKLPEEEPETDLSPGLPAAHLIGA--PLKGQG--LGWETTKEQAFLTSGTQFSDAE 123

Query: 132 ALVVTKAGYYYIYSKVQLGGV-----GCPLGLASTITHGLYKRTPRY-PEELELLVSQQS 185
            L + + G YY+Y  V   G      G P G + T+   LY+    Y P   ELL+    
Sbjct: 124 GLALPQDGLYYLYCLVGYRGRAPPGGGDPQGRSVTLRSSLYRAGGAYGPGTPELLLEGAE 183

Query: 186 PCGRATSSSR------VWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFM 239
                   +R      +W+ S   GG+V L  GE+V V +    +V    G +++FGA M
Sbjct: 184 TVTPVLDPARRQGYGPLWYTSVGFGGLVQLRRGERVYVNISHPDMVDFARG-KTFFGAVM 242

Query: 240 V 240
           V
Sbjct: 243 V 243


>gi|4507593 tumor necrosis factor (ligand) superfamily, member 10
           [Homo sapiens]
          Length = 281

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 31/207 (14%)

Query: 60  QLHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNP----------AAHLTGANSSLTGSG 109
           Q+ W+L ++V ++    +      +QE++ + ++P          AAH+TG         
Sbjct: 79  QVKWQLRQLVRKMILRTSEETISTVQEKQQN-ISPLVRERGPQRVAAHITGTRGRSNTLS 137

Query: 110 GPLL------------WET-QLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQL---GGVG 153
            P              WE+ + G +FL  L   +G LV+ + G+YYIYS+        + 
Sbjct: 138 SPNSKNEKALGRKINSWESSRSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIK 197

Query: 154 CPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGE 213
                   +   +YK T  YP+ + L+ S ++ C    +   ++  S + GG+  L+  +
Sbjct: 198 ENTKNDKQMVQYIYKYT-SYPDPILLMKSARNSCWSKDAEYGLY--SIYQGGIFELKEND 254

Query: 214 KVVVRVLDERLVRLRDGTRSYFGAFMV 240
           ++ V V +E L+ + D   S+FGAF+V
Sbjct: 255 RIFVSVTNEHLIDM-DHEASFFGAFLV 280


>gi|4507609 tumor necrosis factor (ligand) superfamily, member 9
           [Homo sapiens]
          Length = 254

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 69/223 (30%), Positives = 91/223 (40%), Gaps = 44/223 (19%)

Query: 29  RRQSCSV---ARVGLGLLLLLMGAGLAVQGWFLLQLHW---------------RLGEMVT 70
           R ++C V   A V   LLLLL+ A  AV     L   W               RL E   
Sbjct: 20  RARACRVLPWALVAGLLLLLLLAAACAV----FLACPWAVSGARASPGSAASPRLREGPE 75

Query: 71  RLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGLAFLR---GLS 127
             PD PAG    L+  R+       A L   N  L    GPL W +  GLA +    GLS
Sbjct: 76  LSPDDPAG----LLDLRQGM----FAQLVAQNVLLID--GPLSWYSDPGLAGVSLTGGLS 125

Query: 128 YHDGA--LVVTKAGYYYIYSKVQLGGV--GCPLGLASTITHGLYKRTPRYPEELELLVSQ 183
           Y +    LVV KAG YY++ +++L  V  G   G  S   H    R+      L L V  
Sbjct: 126 YKEDTKELVVAKAGVYYVFFQLELRRVVAGEGSGSVSLALHLQPLRSAAGAAALALTVDL 185

Query: 184 QSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVR 226
                 A +S+       F G ++HL AG+++ V +  E   R
Sbjct: 186 PPASSEARNSA-----FGFQGRLLHLSAGQRLGVHLHTEARAR 223


>gi|14790152 tumor necrosis factor ligand superfamily, member 11
           isoform 2 [Homo sapiens]
          Length = 244

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 78  GSWEQLIQERRSHEVNPAAHLT-GANSSLTGSGGPLL--WETQLGLAFLRGLSYHDGALV 134
           GSW  L + R   E  P AHLT  A    +GS    L  W    G A +  +++ +G L+
Sbjct: 76  GSWLDLAK-RSKLEAQPFAHLTINATDIPSGSHKVSLSSWYHDRGWAKISNMTFSNGKLI 134

Query: 135 VTKAGYYYIYSKVQLGGVGCPLGLASTITHGLY---KRTPRYPEELELLVSQQSPCGRAT 191
           V + G+YY+Y+ +          LA+     +    K + + P    L+    +      
Sbjct: 135 VNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGN 194

Query: 192 SSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240
           S    +  S  +GG   L +GE++ + V +  L+   D   +YFGAF V
Sbjct: 195 SEFHFY--SINVGGFFKLRSGEEISIEVSNPSLLD-PDQDATYFGAFKV 240


>gi|4507595 tumor necrosis factor ligand superfamily, member 11
           isoform 1 [Homo sapiens]
          Length = 317

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 78  GSWEQLIQERRSHEVNPAAHLT-GANSSLTGSGGPLL--WETQLGLAFLRGLSYHDGALV 134
           GSW  L + R   E  P AHLT  A    +GS    L  W    G A +  +++ +G L+
Sbjct: 149 GSWLDLAK-RSKLEAQPFAHLTINATDIPSGSHKVSLSSWYHDRGWAKISNMTFSNGKLI 207

Query: 135 VTKAGYYYIYSKVQLGGVGCPLGLASTITHGLY---KRTPRYPEELELLVSQQSPCGRAT 191
           V + G+YY+Y+ +          LA+     +    K + + P    L+    +      
Sbjct: 208 VNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGN 267

Query: 192 SSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240
           S    +  S  +GG   L +GE++ + V +  L+   D   +YFGAF V
Sbjct: 268 SEFHFY--SINVGGFFKLRSGEEISIEVSNPSLLD-PDQDATYFGAFKV 313


>gi|6806893 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 92  VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDGALVVTKAGYYYIYSKVQLG 150
           + PAAHL G  S        LLW      AFL+ G S  + +L+V  +G Y++YS+V   
Sbjct: 61  LKPAAHLIGDPSKQNS----LLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFS 116

Query: 151 GVGCPLGLAST---ITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVV 207
           G        S+   + H +   + +YP  + LL SQ+            W  S + G   
Sbjct: 117 GKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMV---YPGLQEPWLHSMYHGAAF 173

Query: 208 HLEAGEKVVVRVLDERLVRLRDGTRSYFGAF 238
            L  G+++         + L   T  +FGAF
Sbjct: 174 QLTQGDQLSTHTDGIPHLVLSPST-VFFGAF 203


>gi|229092381 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 92  VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDGALVVTKAGYYYIYSKVQLG 150
           + PAAHL G  S        LLW      AFL+ G S  + +L+V  +G Y++YS+V   
Sbjct: 61  LKPAAHLIGDPSKQNS----LLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFS 116

Query: 151 GVGCPLGLAST---ITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVV 207
           G        S+   + H +   + +YP  + LL SQ+            W  S + G   
Sbjct: 117 GKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMV---YPGLQEPWLHSMYHGAAF 173

Query: 208 HLEAGEKVVVRVLDERLVRLRDGTRSYFGAF 238
            L  G+++         + L   T  +FGAF
Sbjct: 174 QLTQGDQLSTHTDGIPHLVLSPST-VFFGAF 203


>gi|4557433 CD40 ligand [Homo sapiens]
          Length = 261

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 26/160 (16%)

Query: 86  ERRSHEVNP--AAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGA--LVVTKAGYY 141
           E +  + NP  AAH+    SS T S   L W  +        L   +    L V + G Y
Sbjct: 112 EMQKGDQNPQIAAHVISEASSKTTS--VLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLY 169

Query: 142 YIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELLV-------SQQSPCGRATSSS 194
           YIY++V      C    AS+    +     + P   E ++       S   PCG+     
Sbjct: 170 YIYAQVTF----CSNREASSQAPFIASLCLKSPGRFERILLRAANTHSSAKPCGQ----- 220

Query: 195 RVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSY 234
                S  LGGV  L+ G  V V V D   V    G  S+
Sbjct: 221 ----QSIHLGGVFELQPGASVFVNVTDPSQVSHGTGFTSF 256


>gi|39812447 3-oxo-5 alpha-steroid 4-dehydrogenase 2 [Homo sapiens]
          Length = 254

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 37  RVGLGLLLLLMGAGLAVQGWFLLQLHWRLGEMVTRLPDG 75
           R  LG+ L ++G G+ +   ++L+   + GE+  R+P G
Sbjct: 145 RFSLGVFLFILGMGINIHSDYILRQLRKPGEISYRIPQG 183


>gi|253795514 choline phosphate cytidylyltransferase 1 beta isoform
           2 [Homo sapiens]
          Length = 351

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 75  GPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGP 111
           GP G+W+Q+ QER S  +   +      SS T S  P
Sbjct: 276 GPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSP 312


>gi|21361202 choline phosphate cytidylyltransferase 1 beta isoform 1
           [Homo sapiens]
          Length = 369

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 75  GPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGP 111
           GP G+W+Q+ QER S  +   +      SS T S  P
Sbjct: 294 GPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSP 330


>gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo
           sapiens]
          Length = 521

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 87  RRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGLAFL-RGLSYHD-GALVVTKAG 139
           R  HE N A +  G N+ + G   P+  E  L  A + R LS+H    ++V +AG
Sbjct: 117 RHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRVLSFHSVSGILVCQAG 171


>gi|239756155 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 184

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 16/95 (16%)

Query: 20  PFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ-------------LHWRLG 66
           P  R G +   +S  VAR  L    LL+G G    G FLLQ             LH R  
Sbjct: 60  PRPRTGPAWLPRSALVARTALLPQGLLVGGGGGSSGLFLLQPQRCSLLLLLCVALHMRTA 119

Query: 67  EMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGA 101
            +   L   PA  W  L++   +H   P+A   GA
Sbjct: 120 AL--HLVKHPAAGW-GLLRTGLAHPGAPSAGARGA 151


>gi|4507597 tumor necrosis factor (ligand) superfamily, member 12
           precursor [Homo sapiens]
          Length = 249

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 23/69 (33%)

Query: 90  HEVNPAAHLTGANSSLTG-----------SGGPLLWETQLGLAFLRGLSYHDGALVVTKA 138
           +EV+P     GA + + G           S  PL +  Q+G              +VT+A
Sbjct: 111 YEVHPRPGQDGAQAGVDGTVSGWEEARINSSSPLRYNRQIG------------EFIVTRA 158

Query: 139 GYYYIYSKV 147
           G YY+Y +V
Sbjct: 159 GLYYLYCQV 167


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,451,681
Number of Sequences: 37866
Number of extensions: 433321
Number of successful extensions: 871
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 851
Number of HSP's gapped (non-prelim): 20
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.