Guide to the Human Genome
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Name: D2HGDH Sequence: fasta or formatted (521aa) NCBI GI: 119964728
Description:

D-2-hydroxyglutarate dehydrogenase precursor

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         41           2
 C cysteine            2.3         12           2
 D aspartate           4.0         21           1
 E glutamate           5.4         28           2
 F phenylalanine       3.1         16           1
 G glycine            10.6         55           2
 H histidine           3.3         17           1
 I isoleucine          3.1         16           2
 K lysine              3.3         17           1
 L leucine            13.2         69           2
 M methionine          1.9         10           1
 N asparagine          2.5         13           1
 P proline             6.3         33           2
 Q glutamine           2.9         15           2
 R arginine            6.7         35           2
 S serine              6.3         33           1
 T threonine           5.2         27           2
 V valine              8.4         44           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   D-2-hydroxyglutarate dehydrogenase precursor 
LDHD                  0.133   D-lactate dehydrogenase isoform 2 precursor 
LDHD                  0.125   D-lactate dehydrogenase isoform 1 precursor 
AGPS                  0.048   alkyldihydroxyacetone phosphate synthase precursor [H...
LOC100291562          0.013   PREDICTED: similar to hCG2045708 
LOC100287770          0.013   PREDICTED: similar to hCG2045708 
LOC100287770          0.013   PREDICTED: hypothetical protein XP_002343109 
MPDZ                  0.010   multiple PDZ domain protein 
LOC100293055          0.006   PREDICTED: similar to COL22A1 protein 
COL17A1               0.006   alpha 1 type XVII collagen 
MARK3                 0.006   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.006   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.006   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.006   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.006   MAP/microtubule affinity-regulating kinase 3 isoform...
COL22A1               0.006   collagen, type XXII, alpha 1 
TRAPPC6A              0.006   trafficking protein particle complex 6A 
LOC100290274          0.006   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.006   PREDICTED: hypothetical protein XP_002342846 
C7orf51               0.006   hypothetical protein FLJ37538 
EPHX1                 0.005   epoxide hydrolase 1 
EPHX1                 0.005   epoxide hydrolase 1 
DHCR24                0.005   24-dehydrocholesterol reductase precursor 
LOC100293538          0.005   PREDICTED: hypothetical protein 
LOC100291263          0.005   PREDICTED: hypothetical protein XP_002347505 
LOC100287521          0.005   PREDICTED: hypothetical protein XP_002343324 
OSTalpha              0.005   organic solute transporter alpha 
KIFC2                 0.005   kinesin family member C2 
FLJ37396              0.005   PREDICTED: hypothetical protein LOC285754 
FLJ37396              0.005   PREDICTED: hypothetical protein LOC285754 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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