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Search of human proteins with 25777602
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens]
(908 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens] 1791 0.0
gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens] 77 7e-14
gi|50083279 centrosome protein 4 [Homo sapiens] 45 4e-04
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 41 0.004
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2... 41 0.004
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 38 0.037
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 37 0.064
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ... 37 0.083
gi|112421108 capicua homolog [Homo sapiens] 37 0.11
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 36 0.14
gi|41055989 M-phase phosphoprotein 8 [Homo sapiens] 36 0.14
gi|157738619 smoothelin-like 1 [Homo sapiens] 36 0.14
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 36 0.19
gi|148746183 ubiquitin specific protease 35 [Homo sapiens] 35 0.41
gi|70980549 programmed cell death 11 [Homo sapiens] 35 0.41
gi|116235474 LKB1 interacting protein [Homo sapiens] 35 0.41
gi|62414289 vimentin [Homo sapiens] 34 0.54
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.54
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 34 0.54
gi|215982794 myosin VA isoform 2 [Homo sapiens] 34 0.54
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 34 0.54
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 34 0.71
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens] 34 0.71
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens] 34 0.71
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens] 34 0.71
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 34 0.71
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 33 0.92
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 33 0.92
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 33 0.92
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 33 0.92
>gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens]
Length = 908
Score = 1791 bits (4639), Expect = 0.0
Identities = 908/908 (100%), Positives = 908/908 (100%)
Query: 1 MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV 60
MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV
Sbjct: 1 MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV 60
Query: 61 ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR 120
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR
Sbjct: 61 ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR 120
Query: 121 FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQ 180
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQ
Sbjct: 121 FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQ 180
Query: 181 REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV 240
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
Sbjct: 181 REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV 240
Query: 241 PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR 300
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
Sbjct: 241 PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR 300
Query: 301 HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
Sbjct: 301 HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG 360
Query: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW 420
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
Sbjct: 361 SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW 420
Query: 421 DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG 480
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
Sbjct: 421 DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG 480
Query: 481 SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
Sbjct: 481 SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 601 AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI 660
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
Sbjct: 601 AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI 660
Query: 661 AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE 720
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
Sbjct: 661 AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE 720
Query: 721 VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP 780
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
Sbjct: 721 VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP 780
Query: 781 YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL 840
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
Sbjct: 781 YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL 840
Query: 841 PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL 900
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
Sbjct: 841 PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL 900
Query: 901 RKNPNYDL 908
RKNPNYDL
Sbjct: 901 RKNPNYDL 908
>gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
Length = 953
Score = 77.0 bits (188), Expect = 7e-14
Identities = 153/733 (20%), Positives = 295/733 (40%), Gaps = 116/733 (15%)
Query: 105 KLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAG 164
K++ +YE+ +++FAA + S + + E L Y L + EYV +
Sbjct: 44 KIEVLYEDEG-FRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA 102
Query: 165 EV----AKEWQELDDAEKVQREP----LLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDM 216
+ K+ E D + +++P L +V ++ + + +A + +E ++D+
Sbjct: 103 KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDV 162
Query: 217 LEKDIDEN-------AYA-KVCLYLTSCVNYVPEPENSALLRCALGVFRKFSR--FPEAL 266
EK I E+ AY+ K+C+ L + + +LR + ++ + F
Sbjct: 163 FEKTILESNDVPGMLAYSLKLCMSLMQNKQF-----RNKVLRVLVKIYMNLEKPDFINVC 217
Query: 267 RLALMLNDMELVEDIFTSC---KDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSN 323
+ + L+D + V DI ++++ Q+ F L LS ++ + +++
Sbjct: 218 QCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIAS 277
Query: 324 VQLNSNFLALA---RELDIME-----------------PKVPDDIYKT------------ 351
V ++N + ++ D ME P+ D K
Sbjct: 278 VPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIEL 337
Query: 352 HLE----NNR-----FGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKN 402
HL+ NN + V ++ + A+ N F++ D+ L D+ +WL +
Sbjct: 338 HLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDN-LEWLARA 396
Query: 403 KDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSED----YIKSGALLACGIVNSGVRNE 458
+ +A ASLG+I L + YL Y + G L A G++++ +
Sbjct: 397 TNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGD 456
Query: 459 CDPALALLSDYVLH-----NSNTMRLGSIFGLGLAYAGSNREDVLTLLLP-VMGDSKSSM 512
+ DY+L+ +++ +R G GLGLA G+ R+DV LL + D +
Sbjct: 457 -------IIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
Query: 513 EVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEA 572
E AG LA G++ +GS N ++ E ++ R L +G+ L G+ E
Sbjct: 510 EAAG---LALGLVMLGSKNAQAIEDMVGYAQETQHEKI----LRGLAVGIALVMYGRMEE 562
Query: 573 IEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHIC-SEHFDSKEKEEDKDK 631
+A++ +L +P + AY GSGN +++LLH+ S+ D + +
Sbjct: 563 ADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESL 622
Query: 632 KEKKDKDKKEAPADMG---------AHQGVAV-LGIALIAMGEEIGAEMALRTFGHLLRY 681
+ ++ P+ + G A+ LGI G + + + Y
Sbjct: 623 GFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY 682
Query: 682 GEPTLRRAVPLALALISVSN-----PRLNILDTL-SKFSHDADPEV--SYNSIFAMGMVG 733
+R+ +A ALI + P++N L SK +D +V + +I A G++
Sbjct: 683 ----VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILD 738
Query: 734 SGTNNARLAAMLR 746
+G +N ++ R
Sbjct: 739 AGGHNVTISLQSR 751
Score = 39.3 bits (90), Expect = 0.017
Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 49/368 (13%)
Query: 431 KYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNT----MRLGSIFGLG 486
++L + ++ K A + G+++ G E AL L++ Y+ +++ G ++ LG
Sbjct: 391 EWLARATNWAKFTATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALG 447
Query: 487 LAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKS 546
L +A + + LL + S + G +L G+ A+G+ DV +L+T + +
Sbjct: 448 LIHANHGGDIIDYLLNQLKNASNDIVRHGG--SLGLGLAAMGTARQDVYD-LLKTNLYQD 504
Query: 547 ETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNV 606
+ + L LGL LG A + D+ YA
Sbjct: 505 DAVTGEAAG----LALGLVMLGSKNA-------------------QAIEDMVGYAQETQH 541
Query: 607 LKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEI 666
K+ + L + EE E +DK G + +A+ G
Sbjct: 542 EKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYT------VAMAYCGS-- 593
Query: 667 GAEMALRTFGHL-LRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNS 725
G A+R H+ + +RRA +L I P +S S +P V Y +
Sbjct: 594 GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGA 652
Query: 726 IFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM--VRLAQGLTHLGKGTLTLCPYHS 783
A+G+ +GT N +L + DP N +A L + + +T +
Sbjct: 653 AMALGICCAGTGNKEAINLLEPM----TNDPVNYVRQGALIASALIMIQQTEITCPKVNQ 708
Query: 784 DRQLMSQV 791
RQL S+V
Sbjct: 709 FRQLYSKV 716
>gi|50083279 centrosome protein 4 [Homo sapiens]
Length = 1140
Score = 44.7 bits (104), Expect = 4e-04
Identities = 74/329 (22%), Positives = 142/329 (43%), Gaps = 67/329 (20%)
Query: 33 RRDAGDKDKEQE-LSEEDKQLQDELEMLVERLGEKDTSL--YRPALEELRRQIRSSTTSM 89
++ G DKE++ L E + +++ L E L K+ ++ + + E + ++
Sbjct: 726 KKTIGVIDKEKDFLQETVDEKTEKIANLQENLANKEKAVAQMKIMISECESSVNQLKETL 785
Query: 90 TSVPKPLKFLRPHYGKL-KEIYE-----NMAPGENKRFAADIISVLAMTMSGERECLKYR 143
+ + + LR KE+ E +A EN+R D+ TM+ E + +
Sbjct: 786 VNRDREINSLRRQLDAAHKELDEVGRSREIAFKENRRLQDDLA-----TMARENQEISLE 840
Query: 144 L---VGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMA--- 197
L V +EE+ S H+Y+ ++ W+ L A++ + + LL + + +N A
Sbjct: 841 LEAAVQEKEEMKSRVHKYITEVS-----RWESLMAAKEKENQDLLDRFQML--HNRAEDW 893
Query: 198 ----HNAEHEACDLLMEI-----------EQVDMLEKDIDENAYAKVCLYLTSCVNYVPE 242
H AE E+ + +E+ E+V++LEK+I E+ A ++ E
Sbjct: 894 EVKAHQAEGESSSVRLELLSIDTERRHLRERVELLEKEIQEHINA----------HHAYE 943
Query: 243 PENSALLRCALGVFRKFSRFPEALR-----LALMLNDMELVEDI---FTSCKDVVVQKQM 294
+ S++ + SR E LR A +LND+ + ++ S KD++ Q+
Sbjct: 944 SQISSMAKA-------MSRLEEELRHQEDEKATVLNDLSSLRELCIKLDSGKDIMTQQLN 996
Query: 295 AFMLGRHGVFLELSEDVEEYEDLTEIMSN 323
+ L V +EL E + L + +SN
Sbjct: 997 SKNLEFERVVVELENVKSESDLLKKQLSN 1025
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 41.2 bits (95), Expect = 0.004
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 36 AGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKP 95
AG KDK Q+ + E+ L D + ++ L S ++ +LE+L+ + S +
Sbjct: 593 AGLKDKVQQATSENMGLMDNWKSKLDSLA----SDHQKSLEDLKATLNSGPGAQ------ 642
Query: 96 LKFLRPHYGKLKEIYENMAPGE-----NKRFAADIISVLAMTMSGERECLKYRLVGSQEE 150
+ G+LK + E + N + D+ + + + E+E L+ +L +QEE
Sbjct: 643 ----QKEIGELKAVMEGIKMEHQLELGNLQAKHDLETAMHVK---EKEALREKLQEAQEE 695
Query: 151 LASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLME 210
LA + L + ++ EL +A+ +R+ L V E+ ++ + + +A + L
Sbjct: 696 LAGLQRHWRAQLEVQASQHRLELQEAQDQRRDAELR-VHELEKLDVEYRGQAQAIEFLK- 753
Query: 211 IEQVDMLEK 219
EQ+ + EK
Sbjct: 754 -EQISLAEK 761
>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
[Homo sapiens]
Length = 1011
Score = 41.2 bits (95), Expect = 0.004
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 36 AGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKP 95
AG KDK Q+ + E+ L D + ++ L S ++ +LE+L+ + S +
Sbjct: 558 AGLKDKVQQATSENMGLMDNWKSKLDSLA----SDHQKSLEDLKATLNSGPGAQ------ 607
Query: 96 LKFLRPHYGKLKEIYENMAPGE-----NKRFAADIISVLAMTMSGERECLKYRLVGSQEE 150
+ G+LK + E + N + D+ + + + E+E L+ +L +QEE
Sbjct: 608 ----QKEIGELKAVMEGIKMEHQLELGNLQAKHDLETAMHVK---EKEALREKLQEAQEE 660
Query: 151 LASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLME 210
LA + L + ++ EL +A+ +R+ L V E+ ++ + + +A + L
Sbjct: 661 LAGLQRHWRAQLEVQASQHRLELQEAQDQRRDAELR-VHELEKLDVEYRGQAQAIEFLK- 718
Query: 211 IEQVDMLEK 219
EQ+ + EK
Sbjct: 719 -EQISLAEK 726
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 38.1 bits (87), Expect = 0.037
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 32 ERRDAGDKDKEQELSEEDKQLQDELE----MLVERLGEKDTSLYRPALEELRRQIRSSTT 87
+ + K+K ++ E QL+ ELE +L + G ++T L++ +EELR Q+ T
Sbjct: 264 DEHEGAIKNKLRQTETEKNQLEQELELSRRLLNQSEGSRETLLHQ--VEELRTQL----T 317
Query: 88 SMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADI---ISVLAMTMSGERECLKYRL 144
K L+ K + Y++ GE+ RF + L MS R L +
Sbjct: 318 KAEGDRKGLQHQVSQISKQQSNYQD-EQGEDWRFRRGVEREKQDLEKQMSDLRVQLNFSA 376
Query: 145 VGSQEELASWGHE----YVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNA 200
+ S+ E E HLA +V +EL++ EK Q + +L +KEI + A
Sbjct: 377 MASELEEVKRCMERKDKEKAHLASQVENLTRELENGEKQQLQ-MLDRLKEIQNHFDTCEA 435
Query: 201 EHEACDL 207
E + DL
Sbjct: 436 ERKHADL 442
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 37.4 bits (85), Expect = 0.064
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 24/171 (14%)
Query: 2 EEGGRDKAPVQPQQSP-----AAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDEL 56
++ R +AP Q P + T + P +++G KD + EL+E L+++
Sbjct: 218 DDASRTRAPGLSSQHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKS 277
Query: 57 EMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPG 116
+ L E G+ Y L +L+ + T +MT+ E+Y+
Sbjct: 278 DKLEELDGK--VKGYEGQLRQLQEAAQGPTVTMTT---------------NELYQAYVDS 320
Query: 117 ENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEY--VRHLAGE 165
+ +++ + ++ + +Y+L G Q++ +G Y V L GE
Sbjct: 321 KIDALREELMEGMDRKLADLKNSCEYKLTGLQQQCDDYGSSYLGVIELIGE 371
>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
[Homo sapiens]
Length = 510
Score = 37.0 bits (84), Expect = 0.083
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 1 MEEGGRDKAPVQPQQSPAAAPGGT--DEKPSGKERRD----AGDKDKEQELSEEDKQLQD 54
ME G PV+P+ P +PGGT ++P G + + A K K ++ ++D ++
Sbjct: 340 MEPGTEAMEPVEPEMKPLESPGGTMAPQQPEGAKPQAQAALAAPKKKTKKEKQQDATVEP 399
Query: 55 ELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMA 114
E E++ L + P + +++ + ++T +PL+ P G+ +
Sbjct: 400 ETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVTEPIQPLEPELPGEGQPE---ARAT 456
Query: 115 PGENKR 120
PG K+
Sbjct: 457 PGSTKK 462
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 36.6 bits (83), Expect = 0.11
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 1 MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQ 53
+E G P P +PA APGG+ E SG R AGD + +E + K+++
Sbjct: 1283 LENRGEPPTPPSPAPAPAVAPGGSSESSSG---RAAGDTPERKEAAGTGKKVK 1332
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 36.2 bits (82), Expect = 0.14
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 497 VLTLLLPV-MGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYA 555
V +LL PV D+ S M G LA G + + + + IL+ + +
Sbjct: 1113 VTSLLKPVGEKDTWSGMRTTGQLRLAHG-VRLKANKDSLYKPILRQKKHFNSLHIPKALQ 1171
Query: 556 RWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHI 615
+ LP K + V+ EP L+D + S + K ++ H+
Sbjct: 1172 KALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQKMKKAKEQRHL 1231
Query: 616 CS-EHFDSKEKEEDKDKKEKKDKDKK 640
+ EHF +K+KEE++ K +KD KK
Sbjct: 1232 HNKEHFRAKQKEEEEKLKRQKDLRKK 1257
>gi|41055989 M-phase phosphoprotein 8 [Homo sapiens]
Length = 860
Score = 36.2 bits (82), Expect = 0.14
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%)
Query: 17 PAAAPGGTDEKPSGKER----RDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYR 72
P +A + SG+ER D+ ++DKE + +E ++ Q + E G K+ +
Sbjct: 380 PVSAQTPKGRRLSGEERGLWSTDSAEEDKETKRNESKEKYQKRHDSDKEEKGRKEPKGLK 439
Query: 73 PALE------------ELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR 120
E E + + + +P K + H K KE +++ N R
Sbjct: 440 TLKEIRNAFDLFKLTPEEKNDVSENNRKREEIPLDFKTIDDH--KTKENKQSLKERRNTR 497
Query: 121 FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEK 178
D + +A G++E L Q + S G + + L ++ EW +L+D +K
Sbjct: 498 DETDTWAYIAA--EGDQEVLDSVC---QADENSDGRQQILSLGMDLQLEWMKLEDFQK 550
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 36.2 bits (82), Expect = 0.14
Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 26/201 (12%)
Query: 2 EEGGRDKAPVQPQQSPA--AAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEML 59
E G ++KAP + S G DE +R G +D E EL +ED + ++
Sbjct: 67 ESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAEAELKKEDGEKEETTVGS 126
Query: 60 VERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENK 119
E G K+ + P + + ST + K +P G+ + + P
Sbjct: 127 QEMTGRKEETKSEPK----EAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKA 182
Query: 120 RFAADIISVLAMTMSGER-ECLKYRLVGSQEELASW-------------------GHEYV 159
+ + +G+R EC + +E A G E
Sbjct: 183 TVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEA 242
Query: 160 RHLAGEVAKEWQELDDAEKVQ 180
+H A E A +E +DAE+ +
Sbjct: 243 KHGAKEEADAKEEAEDAEEAE 263
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.8 bits (81), Expect = 0.19
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Query: 42 EQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRP 101
+ E E +QL DE E L+ +L + Y LE+L+RQ+ + ++ L+ R
Sbjct: 1281 QTENGELSRQL-DEKEALISQL-TRGKLTYTQQLEDLKRQLEEEVKAKNALAHALQSARH 1338
Query: 102 HYGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRH 161
L+E YE E A++ VL+ S E+A W +Y
Sbjct: 1339 DCDLLREQYE-----EETEAKAELQRVLSKANS---------------EVAQWRTKY--- 1375
Query: 162 LAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN--------MAHNAEHEACDLLMEIEQ 213
+ + +EL++A+K + L + + N H ++E DL++++E+
Sbjct: 1376 -ETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVER 1434
Query: 214 VDMLEKDIDE 223
+ +D+
Sbjct: 1435 SNAAAAALDK 1444
>gi|148746183 ubiquitin specific protease 35 [Homo sapiens]
Length = 1018
Score = 34.7 bits (78), Expect = 0.41
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 2 EEGGRDKAPVQPQQSPAAAPGGTDEKPSGKER---RDAGDKDKEQELSEEDKQLQDELEM 58
E GG+ + ++ T+++ G+E R G+++KE+E+ EE+++++ E E
Sbjct: 666 EAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEK 725
Query: 59 LVERLGEKDT 68
E+ E+D+
Sbjct: 726 EAEQEKEEDS 735
>gi|70980549 programmed cell death 11 [Homo sapiens]
Length = 1871
Score = 34.7 bits (78), Expect = 0.41
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 8 KAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQD 54
K QPQ+ A GG + + SG E+ K K+ LSEED L D
Sbjct: 1455 KEKQQPQKPQAQKRGGRECRESGSEQERVSKKPKKAGLSEEDDSLVD 1501
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 34.7 bits (78), Expect = 0.41
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 2 EEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGD--KDKEQELSEEDKQLQDELEML 59
E G ++P + + A P +E+ GKE ++ G+ + E+E EE+++ QD+ E+
Sbjct: 486 EARGPQESPQKMSEEVRAEPQEEEEEKEGKEEKEEGEMVEQGEEEAGEEEEEEQDQKEVE 545
Query: 60 VE 61
E
Sbjct: 546 AE 547
>gi|62414289 vimentin [Homo sapiens]
Length = 466
Score = 34.3 bits (77), Expect = 0.54
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 24 TDEKPSGKERRD--AGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQ 81
T+EK +E D A DK + L +++K L ELE L + + LY + ELRRQ
Sbjct: 101 TNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQ 160
Query: 82 IRSSTTSMTSVPKPLKFLRPHYGKLKE-IYENMAPGENKRFAADIISVLAMTMSGERECL 140
+ T V L +L+E + E M E S R L
Sbjct: 161 VDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDL 220
Query: 141 KYRLVGSQEELA---SWGHEYVRHLAGEVAKEWQELD 174
+ ++ QEE+A E ++ L ++ ++ ++D
Sbjct: 221 ERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQID 257
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.54
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 23 GTDEKPSGKERRDAGDKDK---EQELSEEDKQLQDELEMLVERLGEKDTSLYRPAL 75
G +EK G+E + G ++K ++E+ E++++++D+ E + ERL E + P L
Sbjct: 699 GQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRDQKEKMQERLPEHEERCSEPCL 754
Score = 31.6 bits (70), Expect = 3.5
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 29/189 (15%)
Query: 25 DEKPSGKERRDAGDKDKEQELSEEDKQLQDELEML---VERLGEKDTSLYRPALEELRRQ 81
+EK +E + ++K E EEDK +Q++ EM+ E++ E++ ++ E++R Q
Sbjct: 601 EEKMQEQEEKMWEQEEKMWEQEEEDK-MQEQEEMMWEQEEKMQEQEEKMWEQE-EKMREQ 658
Query: 82 IRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECL- 140
+ + +R K++ E M E K M G+ E +
Sbjct: 659 EEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEK-------------MRGQEEKMW 705
Query: 141 --KYRLVGSQEELASWGHEYVR----HLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPY 194
+ ++ G +E++ WG E +R + + K + L + E+ EP L K V
Sbjct: 706 GQEEKMWGQEEKM--WGQEEMREKEERIRDQKEKMQERLPEHEERCSEPCLPPSK--VLC 761
Query: 195 NMAHNAEHE 203
NM+H E
Sbjct: 762 NMSHTGSVE 770
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 34.3 bits (77), Expect = 0.54
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 44 ELSEEDKQLQDELEMLVERLGEKDTSL---------YRPALEELRRQIRSSTTSMTSVPK 94
EL+ + +LQ E L +L EK++ + + EEL+RQ+ + ++
Sbjct: 1273 ELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQTEELKRQLEEENKAKNALAH 1332
Query: 95 PLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASW 154
L+ R L+E YE G+ + L+ L + E+A W
Sbjct: 1333 ALQSSRHDCDLLREQYEEEQEGKAE--------------------LQRALSKANSEVAQW 1372
Query: 155 GHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN--------MAHNAEHEACD 206
+Y + + +EL++A+K + L +++ N + E D
Sbjct: 1373 RTKY----ETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVED 1428
Query: 207 LLMEIEQVDMLEKDIDE 223
L++++E+ + L +D+
Sbjct: 1429 LMVDVERANSLAAALDK 1445
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 34.3 bits (77), Expect = 0.54
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 25 DEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKD----TSLYRPALEELRR 80
+E+P + + K QEL E+K+L++EL L + L EK T+ PA L
Sbjct: 1191 EERPQIRGAELEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLME 1250
Query: 81 QIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVL----------- 129
Q+ S + + + + LR KE + P ++K D +L
Sbjct: 1251 QLTSVSEELDVRKEEVLILRSQLVSQKEAIQ---PKDDKNTMTDSTILLEDVQKMKDKGE 1307
Query: 130 -AMTMSGERECLKYRLVGSQEELASWGHE-YVRHLAGEVAKEWQELDDAEKVQREPLLTL 187
A G +E RL+ SQ + HE L GE+ +E + +++ + L
Sbjct: 1308 IAQAYIGLKE--TNRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQLLAQNLQLP 1365
Query: 188 VKEIVPYNMAH---NAEHEACDLLMEIEQVD 215
+ + ++ H +E DL+ ++E+ D
Sbjct: 1366 PEARIEASLQHEITRLTNENLDLMEQLEKQD 1396
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 34.3 bits (77), Expect = 0.54
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 25 DEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV-------ERLGEKDTSLYRPALEE 77
+++ G++ R+ + +Q L +E LQ + + L ERLG++ + R LEE
Sbjct: 759 EKEALGQQERERARQRFQQHLEQEQWALQQQRQRLYSEVAEERERLGQQ-AARQRAELEE 817
Query: 78 LRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYE 111
LR+Q+ S++++T + LR + K +E E
Sbjct: 818 LRQQLEESSSALT------RALRAEFEKGREEQE 845
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 33.9 bits (76), Expect = 0.71
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 27/189 (14%)
Query: 40 DKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLK-- 97
++ +LS E KQL +LE+ L +K+ + + + +L ++++ ++ K L+
Sbjct: 692 EENNKLSSEKKQLSRDLEVF---LSQKEDVILKEHITQLEKKLQLMVEEQDNLNKLLENE 748
Query: 98 -----FLRPH-YGKLKEIYENMAPGENKRFAADIISVLAMTMS--GERECLKYRLVGSQE 149
F++ YG LKE+ ++ ++ +++ + +++ E +C
Sbjct: 749 QVQKLFVKTQLYGFLKEMGSEVSEDSEEKDVVNVLQAVGESLAKINEEKC---------- 798
Query: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLM 209
LA E V E+ KE + L + VQ E L +L+++ + E E
Sbjct: 799 NLAFQRDEKVL----ELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEK 854
Query: 210 EIEQVDMLE 218
E Q D+LE
Sbjct: 855 EALQSDLLE 863
>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.9 bits (76), Expect = 0.71
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 29 SGKERRDAGDK--DKEQELSEEDKQ---LQDELEMLVERLGEKDTSLYRPALEELRRQIR 83
S +E ++ DK ++ELSE DK+ L E+E L +R ++ + R + L R
Sbjct: 249 SAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGILRSLEDALAEAQR 308
Query: 84 SSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAA 123
+T S ++ K L K KE+ +NM ++K AA
Sbjct: 309 VNTKSQSAFDLKKKNLACEESKRKELEKNMVE-DSKTLAA 347
>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.9 bits (76), Expect = 0.71
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 29 SGKERRDAGDK--DKEQELSEEDKQ---LQDELEMLVERLGEKDTSLYRPALEELRRQIR 83
S +E ++ DK ++ELSE DK+ L E+E L +R ++ + R + L R
Sbjct: 249 SAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGILRSLEDALAEAQR 308
Query: 84 SSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAA 123
+T S ++ K L K KE+ +NM ++K AA
Sbjct: 309 VNTKSQSAFDLKKKNLACEESKRKELEKNMVE-DSKTLAA 347
>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.9 bits (76), Expect = 0.71
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 29 SGKERRDAGDK--DKEQELSEEDKQ---LQDELEMLVERLGEKDTSLYRPALEELRRQIR 83
S +E ++ DK ++ELSE DK+ L E+E L +R ++ + R + L R
Sbjct: 249 SAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGILRSLEDALAEAQR 308
Query: 84 SSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAA 123
+T S ++ K L K KE+ +NM ++K AA
Sbjct: 309 VNTKSQSAFDLKKKNLACEESKRKELEKNMVE-DSKTLAA 347
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 33.9 bits (76), Expect = 0.71
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPH 102
Q S E +L +E E L+ +L + +L +LEELRRQ+ + + +++ ++ LR
Sbjct: 1330 QTESGELSRLLEEKECLISQLS-RGKALAAQSLEELRRQLEEESKAKSALAHAVQALRHD 1388
Query: 103 YGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHL 162
L+E +E A + + L+ L + E+A W +Y
Sbjct: 1389 CDLLREQHEEEAEAQAE--------------------LQRLLSKANAEVAQWRSKY---- 1424
Query: 163 AGEVAKEWQELDDAEK 178
+ + +EL++A+K
Sbjct: 1425 EADAIQRTEELEEAKK 1440
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 33.5 bits (75), Expect = 0.92
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
KE ++ DK+K++E E + +DE + R ++ YRP SS ++M+
Sbjct: 642 KEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMS 701
Query: 91 S 91
S
Sbjct: 702 S 702
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 33.5 bits (75), Expect = 0.92
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
KE ++ DK+K++E E + +DE + R ++ YRP SS ++M+
Sbjct: 729 KEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMS 788
Query: 91 S 91
S
Sbjct: 789 S 789
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 33.5 bits (75), Expect = 0.92
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
KE ++ DK+K++E E + +DE + R ++ YRP SS ++M+
Sbjct: 729 KEEKEKQDKEKQEEKKESETSREDEYKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMS 788
Query: 91 S 91
S
Sbjct: 789 S 789
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 33.5 bits (75), Expect = 0.92
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 26 EKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLVER--LGEKDTSLYRPALEELRRQIR 83
E P + ++ GD ++++E+ EE+ + +DE E ER LGE + L L R ++R
Sbjct: 394 EVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEGILLPSDRDRLR 453
Query: 84 SST 86
S T
Sbjct: 454 SET 456
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,338,707
Number of Sequences: 37866
Number of extensions: 1508431
Number of successful extensions: 10888
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 10242
Number of HSP's gapped (non-prelim): 755
length of query: 908
length of database: 18,247,518
effective HSP length: 111
effective length of query: 797
effective length of database: 14,044,392
effective search space: 11193380424
effective search space used: 11193380424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.