PSMD2 24126

Name: PSMD2	Sequence: fasta or formatted (908aa)		NCBI GI: 25777602
Description: proteasome 26S non-ATPase subunit 2		Referenced in: Proteasome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 79 3 C cysteine 1.4 13 1 D aspartate 5.9 54 2 E glutamate 8.5 77 2 F phenylalanine 2.9 26 1 G glycine 7.3 66 2 H histidine 2.3 21 1 I isoleucine 3.6 33 2 K lysine 5.6 51 2 L leucine 13.0 118 3 M methionine 3.6 33 1 N asparagine 4.1 37 2 P proline 4.0 36 1 Q glutamine 3.3 30 2 R arginine 4.6 42 2 S serine 6.3 57 2 T threonine 4.2 38 2 V valine 7.3 66 3 W tryptophan 0.6 5 1 Y tyrosine 2.9 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 2 PSMD1 0.029 proteasome 26S non-ATPase subunit 1 CEP135 0.011 centrosome protein 4 CLIP2 0.009 CAP-GLY domain containing linker protein 2 isoform ... CLIP2 0.009 CAP-GLY domain containing linker protein 2 isoform 2... C14orf145 0.007 hypothetical protein LOC145508 EMILIN2 0.007 elastin microfibril interfacer 2 CD3EAP 0.007 CD3E antigen, epsilon polypeptide associated protein ... CIC 0.007 capicua homolog BMS1 0.006 BMS1-like, ribosome assembly protein MPHOSPH8 0.006 M-phase phosphoprotein 8 SMTNL1 0.006 smoothelin-like 1 MYH7 0.006 myosin, heavy chain 7, cardiac muscle, beta USP35 0.006 ubiquitin specific protease 35 PDCD11 0.006 programmed cell death 11 STK11IP 0.006 LKB1 interacting protein VIM 0.005 vimentin LOC283685 0.005 PREDICTED: golgi autoantigen, golgin subfamily a-li... MYH3 0.005 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYO5A 0.005 myosin VA isoform 2 AZI1 0.005 5-azacytidine induced 1 isoform a GCC2 0.005 GRIP and coiled-coil domain-containing 2 SMC2 0.005 structural maintenance of chromosomes 2 SMC2 0.005 structural maintenance of chromosomes 2 SMC2 0.005 structural maintenance of chromosomes 2 MYH7B 0.005 myosin, heavy polypeptide 7B, cardiac muscle, beta ... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subunit... OS9 0.005 osteosarcoma amplified 9 isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.