Guide to the Human Genome
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Name: ND5 Sequence: fasta or formatted (603aa) NCBI GI: 251831117
Description:

NADH dehydrogenase subunit 5

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot {603aa} NADH dehydrogenase subunit 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         44           3
 C cysteine            1.0          6           1
 D aspartate           1.8         11           1
 E glutamate           1.5          9           1
 F phenylalanine       6.3         38           3
 G glycine             4.3         26           2
 H histidine           2.3         14           1
 I isoleucine          9.0         54           2
 K lysine              3.5         21           2
 L leucine            17.2        104           4
 M methionine          4.3         26           2
 N asparagine          5.5         33           2
 P proline             5.3         32           2
 Q glutamine           3.3         20           2
 R arginine            1.3          8           1
 S serine              8.1         49           2
 T threonine          10.8         65           2
 V valine              2.5         15           2
 W tryptophan          2.0         12           2
 Y tyrosine            2.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase subunit 5 
ND5                   0.986   NADH dehydrogenase subunit 5 
ND4                   0.040   NADH dehydrogenase subunit 4 
ND4                   0.040   NADH dehydrogenase subunit 4 
ND2                   0.038   NADH dehydrogenase subunit 2 
ND2                   0.038   NADH dehydrogenase subunit 2 
SLC35F2               0.009   solute carrier family 35, member F2 
COX3                  0.005   cytochrome c oxidase subunit III 
COX3                  0.005   cytochrome c oxidase subunit III 
NLRP4                 0.005   NLR family, pyrin domain containing 4 
FITM1                 0.005   fat-inducing transcript 1 
SIGLEC5               0.005   sialic acid binding Ig-like lectin 5 
SIGLEC14              0.005   sialic acid binding Ig-like lectin 14 
GPR112                0.005   G-protein coupled receptor 112 
OR1C1                 0.004   olfactory receptor, family 1, subfamily C, member 1...
TXNDC11               0.004   thioredoxin domain containing 11 
PIGU                  0.004   phosphatidylinositol glycan anchor biosynthesis, cla...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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