Guide to the Human Genome
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Name: ND2 Sequence: fasta or formatted (347aa) NCBI GI: 196123580
Description:

NADH dehydrogenase subunit 2

Homo sapiens neanderthalensis sequence

Other entries for this name:
alt prot [347aa] NADH dehydrogenase subunit 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         19           2
 C cysteine            0.0          0           0
 D aspartate           0.0          0           0
 E glutamate           1.7          6           2
 F phenylalanine       4.3         15           2
 G glycine             3.7         13           2
 H histidine           1.2          4           1
 I isoleucine          8.6         30           2
 K lysine              3.5         12           2
 L leucine            18.4         64           4
 M methionine          7.2         25           2
 N asparagine          5.8         20           2
 P proline             6.6         23           2
 Q glutamine           2.9         10           1
 R arginine            1.2          4           1
 S serine              8.1         28           2
 T threonine          12.7         44           3
 V valine              2.6          9           1
 W tryptophan          3.2         11           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase subunit 2 
ND2                   0.995   NADH dehydrogenase subunit 2 
ND5                   0.066   NADH dehydrogenase subunit 5 
ND5                   0.063   NADH dehydrogenase subunit 5 
ND4                   0.050   NADH dehydrogenase subunit 4 
ND4                   0.050   NADH dehydrogenase subunit 4 
TMEM106C              0.012   transmembrane protein 106C isoform b 
TMEM106C              0.012   transmembrane protein 106C isoform b 
SLC41A3               0.011   solute carrier family 41, member 3 isoform 3 
SLC41A3               0.011   solute carrier family 41, member 3 isoform 1 
MUC16                 0.011   mucin 16 
ATP6                  0.009   ATP synthase F0 subunit 6 
TAP1                  0.008   transporter 1, ATP-binding cassette, sub-family B [Ho...
TMEM106C              0.008   transmembrane protein 106C isoform a 
TMEM106C              0.008   transmembrane protein 106C isoform a 
ATP6                  0.008   ATP synthase F0 subunit 6 
SERPINB10             0.008   serine (or cysteine) proteinase inhibitor, clade B (o...
BCHE                  0.006   butyrylcholinesterase precursor 
SLC11A1               0.005   natural resistance-associated macrophage protein 1 ...
LOC100293561          0.005   PREDICTED: similar to Protein MOST-1 
MUC17                 0.005   mucin 17 
SLC35A1               0.005   solute carrier family 35 (CMP-sialic acid transporter...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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