TRAPPC6A 3036

Name: TRAPPC6A	Sequence: fasta or formatted (173aa)		NCBI GI: 13129120
Description: trafficking protein particle complex 6A		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 16 2 C cysteine 1.7 3 1 D aspartate 4.0 7 1 E glutamate 7.5 13 2 F phenylalanine 5.8 10 1 G glycine 8.7 15 1 H histidine 1.7 3 1 I isoleucine 1.2 2 1 K lysine 4.6 8 1 L leucine 15.0 26 3 M methionine 3.5 6 1 N asparagine 1.2 2 1 P proline 5.2 9 1 Q glutamine 4.6 8 1 R arginine 4.0 7 1 S serine 5.2 9 1 T threonine 5.2 9 1 V valine 8.7 15 2 W tryptophan 1.2 2 1 Y tyrosine 1.7 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trafficking protein particle complex 6A TRAPPC6B 0.477 trafficking protein particle complex 6B isoform 1 [... TRAPPC6B 0.327 trafficking protein particle complex 6B isoform 2 [H... D2HGDH 0.019 D-2-hydroxyglutarate dehydrogenase precursor BET3L 0.009 BET3 like UNC84B 0.009 unc-84 homolog B INTS2 0.009 integrator complex subunit 2 MAP3K12 0.006 mitogen-activated protein kinase kinase kinase 12 [H... C2orf86 0.006 hypothetical protein LOC51057 isoform 1 C2orf86 0.006 hypothetical protein LOC51057 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.