Guide to the Human Genome
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Name: PDE7A Sequence: fasta or formatted (456aa) NCBI GI: 24429566
Description:

phosphodiesterase 7A isoform a

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [424aa] phosphodiesterase 7A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         26           3
 C cysteine            1.8          8           1
 D aspartate           5.3         24           3
 E glutamate           5.7         26           2
 F phenylalanine       4.8         22           2
 G glycine             4.6         21           1
 H histidine           4.8         22           2
 I isoleucine          5.5         25           1
 K lysine              3.5         16           2
 L leucine            13.2         60           2
 M methionine          2.4         11           2
 N asparagine          4.8         22           1
 P proline             2.4         11           1
 Q glutamine           4.6         21           2
 R arginine            7.2         33           2
 S serine              9.2         42           3
 T threonine           5.0         23           1
 V valine              4.4         20           1
 W tryptophan          2.0          9           1
 Y tyrosine            3.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphodiesterase 7A isoform a 
PDE7A                 0.815   phosphodiesterase 7A isoform b 
PDE7B                 0.581   phosphodiesterase 7B 
PDE4A                 0.204   phosphodiesterase 4A isoform 3 
PDE4A                 0.204   phosphodiesterase 4A isoform 2 
PDE4A                 0.204   phosphodiesterase 4A isoform 1 
PDE4A                 0.204   phosphodiesterase 4A isoform 4 
PDE4B                 0.204   phosphodiesterase 4B isoform 1 
PDE4B                 0.204   phosphodiesterase 4B isoform 3 
PDE4B                 0.204   phosphodiesterase 4B isoform 2 
PDE4B                 0.204   phosphodiesterase 4B isoform 1 
PDE4D                 0.203   phosphodiesterase 4D isoform 1 
PDE4D                 0.203   phosphodiesterase 4D isoform 2 
PDE4C                 0.203   phosphodiesterase 4C isoform PDE4C-2 
PDE4C                 0.203   phosphodiesterase 4C isoform PDE4C-3 
PDE4C                 0.203   phosphodiesterase 4C isoform PDE4C-1 
PDE8A                 0.184   phosphodiesterase 8A isoform 2 
PDE8A                 0.184   phosphodiesterase 8A isoform 1 
PDE8B                 0.176   phosphodiesterase 8B isoform 5 
PDE8B                 0.171   phosphodiesterase 8B isoform 2 
PDE8B                 0.171   phosphodiesterase 8B isoform 4 
PDE8B                 0.171   phosphodiesterase 8B isoform 3 
PDE8B                 0.171   phosphodiesterase 8B isoform 1 
PDE1B                 0.166   phosphodiesterase 1B 
PDE1C                 0.164   phosphodiesterase 1C 
PDE1A                 0.162   phosphodiesterase 1A isoform 2 
PDE1A                 0.162   phosphodiesterase 1A isoform 1 
PDE9A                 0.147   phosphodiesterase 9A isoform g 
PDE9A                 0.147   phosphodiesterase 9A isoform g 
PDE9A                 0.147   phosphodiesterase 9A isoform o 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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