Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 24308458
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 679 0.0
gi|167466286 limb expression 1 [Homo sapiens] 296 1e-80
gi|39812378 RAN binding protein 9 [Homo sapiens] 53 3e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 51 2e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 51 2e-06
gi|82546824 forkhead box K1 [Homo sapiens] 50 2e-06
gi|56549694 enabled homolog isoform a [Homo sapiens] 49 5e-06
gi|39930375 enabled homolog isoform b [Homo sapiens] 49 5e-06
gi|52485606 formin-like 2 [Homo sapiens] 49 8e-06
gi|7706687 Enah/Vasp-like [Homo sapiens] 49 8e-06
gi|11386183 WAS protein family, member 2 [Homo sapiens] 48 1e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 48 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 48 1e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 48 1e-05
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 48 1e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 48 1e-05
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 47 2e-05
gi|31543535 R3H domain containing 1 [Homo sapiens] 47 2e-05
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 47 2e-05
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 47 2e-05
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 47 2e-05
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 47 2e-05
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 46 4e-05
gi|55741677 SET domain containing 1A [Homo sapiens] 46 5e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 45 9e-05
gi|238859557 regulatory factor X1 [Homo sapiens] 45 9e-05
gi|4557329 fas ligand [Homo sapiens] 45 9e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 9e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 9e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 45 9e-05
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 679 bits (1753), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSG 60
METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSG
Sbjct: 1 METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSG 60
Query: 61 APGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKN 120
APGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKN
Sbjct: 61 APGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKN 120
Query: 121 GALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSR 180
GALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSR
Sbjct: 121 GALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSR 180
Query: 181 RITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLL 240
RITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLL
Sbjct: 181 RITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLL 240
Query: 241 HWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSVPGALSRELASTER 300
HWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSVPGALSRELASTER
Sbjct: 241 HWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSVPGALSRELASTER 300
Query: 301 ELDEARLAGKELRFHKEKKDILVLAAGQLGNMHSSNC 337
ELDEARLAGKELRFHKEKKDILVLAAGQLGNMHSSNC
Sbjct: 301 ELDEARLAGKELRFHKEKKDILVLAAGQLGNMHSSNC 337
>gi|167466286 limb expression 1 [Homo sapiens]
Length = 282
Score = 296 bits (759), Expect = 1e-80
Identities = 142/232 (61%), Positives = 187/232 (80%)
Query: 98 VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157
+NVV LQEFW+ KQ + A + +VVYE +P+ PP+V YVTLPGGSCFG+FQ C ++
Sbjct: 28 LNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSR 87
Query: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRF 217
AEARR AAK+AL+NS+FNE PSRRIT EFI +SV EA+AS +G ++AD+P+T +GA+ +
Sbjct: 88 AEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHY 147
Query: 218 MLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMA 277
MLESN GK+MLEFQELMT+FQLLHWNGSLKA+RE +CSRQEV+++YS +LD+ +R MA
Sbjct: 148 MLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMA 207
Query: 278 LDWVSREQSVPGALSRELASTERELDEARLAGKELRFHKEKKDILVLAAGQL 329
LDW+ +E+ PG +S+EL R+L+EAR AG+ELRF+KEKK+IL LA Q+
Sbjct: 208 LDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLALTQI 259
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 53.1 bits (126), Expect = 3e-07
Identities = 31/69 (44%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 11 PGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPA-----PPPPAPPPPPLLLSGAPGLP 65
PG G G G A AAA PP PPPA PPPP PPPP + A G P
Sbjct: 51 PGGGAGGEGLGAA-------AAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPP 103
Query: 66 LPPGAAGSP 74
PPG A P
Sbjct: 104 APPGLAAGP 112
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 12 GVGTSGRGTLRALRPGVTGAAAATATPPAGPPP----APPPPAPPPPPLLLSG---APGL 64
G+G + L P A AA PP PPP A P PP PP L +G A G
Sbjct: 59 GLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGA 118
Query: 65 PLPPGAAGSPA 75
P P AGS A
Sbjct: 119 PTPALVAGSSA 129
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 40 AGPPPAPPPPAP-------PPPPLLLSGAPG--LPLPP--GAAGSPA 75
+G PP PPP PPPP L+ G LP PP A SPA
Sbjct: 2 SGQPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPA 48
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 50.8 bits (120), Expect = 2e-06
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 35 TATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQG 94
+A PP PPP PPPP PPPPP P PLPP + P +L + V T
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPP------PPPPLPPPTSPKPTILPKKKLTVASPVTTATPL 2455
Query: 95 YGRVNVVE 102
+ V +E
Sbjct: 2456 FDAVTTLE 2463
Score = 32.0 bits (71), Expect = 0.81
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 10 QPGVGT-----SGRGTLRALRPGVTGAAAA----TATPPAGPPPAPPPPAPPPPPLLLSG 60
QPG G +G G A + G T + PP P PA PPP P S
Sbjct: 443 QPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQ 502
Query: 61 APGLPLPPGAAGSPA 75
PG PP PA
Sbjct: 503 QPGSTKPPPQQPGPA 517
Score = 29.6 bits (65), Expect = 4.0
Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 19/85 (22%)
Query: 10 QPGVGTSGRGTLR--ALRPGVTGAAA---ATATPPAGPPPAPPPPA----PPPPPLLLSG 60
QPG S G + A G+T A T PP PP PPA P PP +G
Sbjct: 318 QPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTG 377
Query: 61 A-------PG---LPLPPGAAGSPA 75
+ PG L PPG +PA
Sbjct: 378 SEKPSSEQPGPKALAQPPGVGKTPA 402
Score = 28.5 bits (62), Expect = 8.9
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
+T PP P PA P P P S PG P SPA
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPA 547
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 50.8 bits (120), Expect = 2e-06
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 35 TATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQG 94
+A PP PPP PPPP PPPPP P PLPP + P +L + V T
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPP------PPPPLPPPTSPKPTILPKKKLTVASPVTTATPL 2455
Query: 95 YGRVNVVE 102
+ V +E
Sbjct: 2456 FDAVTTLE 2463
Score = 32.0 bits (71), Expect = 0.81
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 10 QPGVGT-----SGRGTLRALRPGVTGAAAA----TATPPAGPPPAPPPPAPPPPPLLLSG 60
QPG G +G G A + G T + PP P PA PPP P S
Sbjct: 443 QPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQ 502
Query: 61 APGLPLPPGAAGSPA 75
PG PP PA
Sbjct: 503 QPGSTKPPPQQPGPA 517
Score = 29.6 bits (65), Expect = 4.0
Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 19/85 (22%)
Query: 10 QPGVGTSGRGTLR--ALRPGVTGAAA---ATATPPAGPPPAPPPPA----PPPPPLLLSG 60
QPG S G + A G+T A T PP PP PPA P PP +G
Sbjct: 318 QPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTG 377
Query: 61 A-------PG---LPLPPGAAGSPA 75
+ PG L PPG +PA
Sbjct: 378 SEKPSSEQPGPKALAQPPGVGKTPA 402
Score = 28.5 bits (62), Expect = 8.9
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
+T PP P PA P P P S PG P SPA
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPA 547
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 50.4 bits (119), Expect = 2e-06
Identities = 31/60 (51%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 16 SGRGTLRALR-----PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGA 70
SG L ALR P + AAAA A P A PPPAP P PPP P P PLPPGA
Sbjct: 8 SGARALLALRSAPCSPVLCAAAAAAAFPAAAPPPAPAQPQPPPGP---PPPPPPPLPPGA 64
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 49.3 bits (116), Expect = 5e-06
Identities = 28/57 (49%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 24 LRPGVTGAAAATATPPAGPPPAPP-----PPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
L PG A+ A PP GPPP PP PP PPPPP L + P P PP A PA
Sbjct: 319 LPPGPAQASVALPPPP-GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
Score = 42.7 bits (99), Expect = 5e-04
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 10 QPGVGTSGRGTLRALRPGVTGAAAATATPPAGPP-PA------PPPPAPPPPPLLLSGAP 62
+PG+ + + + G+ A PP PP PA PPPP PPPPP L S P
Sbjct: 288 EPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGP 347
Query: 63 GLPLPP 68
P PP
Sbjct: 348 PPPPPP 353
Score = 36.6 bits (83), Expect = 0.033
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Query: 34 ATATPPAGPPPA------PPPPAPPPPPLLLSG 60
+T PP PPP PPPP PP PPL SG
Sbjct: 344 STGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 49.3 bits (116), Expect = 5e-06
Identities = 28/57 (49%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 24 LRPGVTGAAAATATPPAGPPPAPP-----PPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
L PG A+ A PP GPPP PP PP PPPPP L + P P PP A PA
Sbjct: 319 LPPGPAQASVALPPPP-GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
Score = 42.7 bits (99), Expect = 5e-04
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 10 QPGVGTSGRGTLRALRPGVTGAAAATATPPAGPP-PA------PPPPAPPPPPLLLSGAP 62
+PG+ + + + G+ A PP PP PA PPPP PPPPP L S P
Sbjct: 288 EPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGP 347
Query: 63 GLPLPP 68
P PP
Sbjct: 348 PPPPPP 353
Score = 36.6 bits (83), Expect = 0.033
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Query: 34 ATATPPAGPPPA------PPPPAPPPPPLLLSG 60
+T PP PPP PPPP PP PPL SG
Sbjct: 344 STGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 48.5 bits (114), Expect = 8e-06
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
PP PPP PPPP PPPPPL A +P PP A P+
Sbjct: 556 PPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPS 593
Score = 40.0 bits (92), Expect = 0.003
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSP 74
PP PPP PPPP PP P P PL P +P
Sbjct: 559 PPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAP 595
Score = 38.5 bits (88), Expect = 0.009
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 2 ETMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGA 61
E + + P +G + G L P + ++ T GP P PP PPPPP
Sbjct: 507 EVVAGNSVGPTMGAASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPP----PP 562
Query: 62 PGLPLPPGAAGSPAVLREAVEA 83
P P PP P E V A
Sbjct: 563 PPPPPPPPPPPLPGPAAETVPA 584
Score = 38.1 bits (87), Expect = 0.011
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 38 PPAGPPPAPPPPAP-------PPPPLLLSGAPGLPLPPGAAG--SPAVLREAVEAVVR 86
PP PPP PPPP P P PPL AP LP P G SP V+ + A V+
Sbjct: 562 PPPPPPPPPPPPLPGPAAETVPAPPL----APPLPSAPPLPGTSSPTVVFNSGLAAVK 615
Score = 32.7 bits (73), Expect = 0.47
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 14 GTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPP 68
GT G+ V A ++ P PPP P PP+ P + +G P+PP
Sbjct: 500 GTLSMGSEVVAGNSVGPTMGAASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPP 554
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 48.5 bits (114), Expect = 8e-06
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 15 TSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAG 72
TS G + L PG +AA+ +GPPP PPPP PPPP +GA P PP AG
Sbjct: 159 TSATGPI--LPPGHPSSAASAPVSCSGPPPPPPPPVPPPP----TGATPPPPPPLPAG 210
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 48.1 bits (113), Expect = 1e-05
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 10 QPGVGTSGRGTLRALRPGVTGAAAATATPPA-----GPPPAPPPPAPP------PPPLLL 58
Q G G +G + P A +PP PPPAPPPP PP PPP +
Sbjct: 281 QRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVG 340
Query: 59 SGAPGLPLPPGAAGSP 74
G+PG P PP P
Sbjct: 341 FGSPGTPPPPSPPSFP 356
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 36 ATPPAGPPPA------PPPP-------APPPPPLLLSGAPGLPLPP--GAAGSPAVLREA 80
A PP PPPA PPPP APPPPP PG P PP GA G PA+
Sbjct: 363 APPPPPPPPAADYPTLPPPPLSQPTGGAPPPPP--PPPPPGPPPPPFTGADGQPAIPPPL 420
Query: 81 VEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQ 112
+ + R +++ A+++ +Q+++
Sbjct: 421 SDTTKPKSSLPAVSDARSDLLSAIRQGFQLRR 452
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 35 TATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLP 67
T P PPP PPP PPPP G P +P P
Sbjct: 387 TGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPP 419
Score = 37.0 bits (84), Expect = 0.025
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPP----APPPPPLLLSGAPGLPLPP 68
P G + PP PP PP P PPPPP + P LP PP
Sbjct: 336 PPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPP 382
Score = 35.0 bits (79), Expect = 0.095
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 18/67 (26%)
Query: 26 PGVTGAAAATATPPAGP--PPAP----PPPAPPPP----PLL--------LSGAPGLPLP 67
P V + T PP+ P PP P PPP PPPP P L GAP P P
Sbjct: 337 PPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPP 396
Query: 68 PGAAGSP 74
P G P
Sbjct: 397 PPPPGPP 403
Score = 33.5 bits (75), Expect = 0.28
Identities = 25/64 (39%), Positives = 26/64 (40%), Gaps = 17/64 (26%)
Query: 30 GAAAATATPPAGPP----PAPPPPA--------PPP-----PPLLLSGAPGLPLPPGAAG 72
G A A PP PP P PPPP PPP PP AP P PP AA
Sbjct: 315 GFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAAD 374
Query: 73 SPAV 76
P +
Sbjct: 375 YPTL 378
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 48.1 bits (113), Expect = 1e-05
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 28 VTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRS 87
VT A+ +PP PPP PPPP PPPPP P P + +P ++ + +++
Sbjct: 616 VTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQN 675
Query: 88 FAKHT 92
++H+
Sbjct: 676 ASQHS 680
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 19/81 (23%)
Query: 22 RALRPGVTGAAAATATPPAGP------------PPAPP-PPAPPPPPLLLSGAPGLPLPP 68
+ + P VT AA T TPP P PP+PP PP P PPP L PP
Sbjct: 792 KTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPP 851
Query: 69 GAAGSPAVLREAVEAVVRSFA 89
+ SP V +VV+ A
Sbjct: 852 PSPLSP------VPSVVKQIA 866
Score = 35.4 bits (80), Expect = 0.073
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 38 PPAGPPPAPPPPAPPPPP----LLLSGAPGLPLPPGAAGSPAVLR 78
PP G P PPPP PPP P L AP P P + P L+
Sbjct: 704 PPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLK 748
Score = 34.7 bits (78), Expect = 0.12
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 34 ATATPPAGPP-PAPPPPAPPPPPLLLSGAP 62
A TPP PP PAP PP PP PL+ AP
Sbjct: 759 APPTPPPPPPIPAPLPPQAPPKPLVTIPAP 788
Score = 33.9 bits (76), Expect = 0.21
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPG 69
PP PPP+P P PPPPP S P PG
Sbjct: 928 PP--PPPSPVPAPPPPPPPTASPTPDKSGSPG 957
Score = 32.3 bits (72), Expect = 0.62
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 20/54 (37%)
Query: 35 TATPPAGPPPAPPPPAPPPP--------------------PLLLSGAPGLPLPP 68
T P PPP PP PAP PP P++ AP P PP
Sbjct: 756 TQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPP 809
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 17/58 (29%)
Query: 31 AAAATATPPAGPPPAP------------PPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
A A + P PP P PP PPPPP + + PLPP A P V
Sbjct: 731 APCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPA-----PLPPQAPPKPLV 783
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Query: 38 PPAGPPPAP--PPPAP------PPPPLLLSGAPGLPLPPGAAGSP 74
P + P P+P PPP P PPPP AP P PP A+ +P
Sbjct: 906 PSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTP 950
Score = 31.2 bits (69), Expect = 1.4
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 37 TPPAGPPPAPPPPAPPPPPLLLSGAPG 63
+P PPP PPP A P P SG+PG
Sbjct: 933 SPVPAPPPPPPPTASPTPD--KSGSPG 957
Score = 30.0 bits (66), Expect = 3.1
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 25/78 (32%)
Query: 22 RALRPGVTGAAAATATPPAGPPPAPPP--------PAP----------PPPPL------- 56
++++P + PP PPP P P PAP PPPPL
Sbjct: 695 QSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQH 754
Query: 57 LLSGAPGLPLPPGAAGSP 74
+ AP P PP +P
Sbjct: 755 ITQVAPPTPPPPPPIPAP 772
Score = 29.3 bits (64), Expect = 5.2
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 17/55 (30%)
Query: 26 PGVTGAAAATATPPAGPPPAPP-PPA-----------PPPPPLLLSGAPGLPLPP 68
P T A T A P P PP PPA PP PP P +P+PP
Sbjct: 788 PTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPP-----TPPVPVPP 837
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 19 GTLRALRPGVTGAAAATATPP-----AGPPPAPPPPAP-----PPPPLLLSGAPGLPLPP 68
GT P + G+A PP AG PP PPPP P PPPP L G PG+P PP
Sbjct: 663 GTAIPPPPPLPGSARIPPPPPPLPGSAGIPP-PPPPLPGEAGMPPPPPPLPGGPGIPPPP 721
Query: 69 GAAGSPAV 76
G P +
Sbjct: 722 PFPGGPGI 729
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 26 PGVTGAAAATATPP-----AGPPPAPPP-----PAPPPPPLLLSGAPGLPLPPGAAGSP 74
P + G+A PP AG PP PPP PPPPP G PG+P PP G P
Sbjct: 683 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPF--PGGPGIPPPPPGMGMP 739
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
PG +G P PPPP PPPPP L G + PP G A+
Sbjct: 580 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAI 630
Score = 37.0 bits (84), Expect = 0.025
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 23/79 (29%)
Query: 19 GTLRALRPGVTGAAAATATP--------------PAGPPPAPPPPAP-----PPPPLLLS 59
GT + P ++G A P P G PPPP P PPPP L
Sbjct: 627 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLP 686
Query: 60 GAPGLPLP----PGAAGSP 74
G+ G+P P PG AG P
Sbjct: 687 GSAGIPPPPPPLPGEAGMP 705
Score = 35.0 bits (79), Expect = 0.095
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 31 AAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAA 71
+AAA PP+ P AP PPAPP P G G +PP A
Sbjct: 557 SAAAITVPPSVPSRAPVPPAPPLP-----GDSGTIIPPPPA 592
Score = 35.0 bits (79), Expect = 0.095
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 26 PGVTGAAAATATPP-AGPPPAPPPPAPP-----PPPLLLSGAPGLPLPPGAAGSPAV 76
P + G A + PP +G PPPP P P P L G +P PP GS +
Sbjct: 622 PSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 678
Score = 33.9 bits (76), Expect = 0.21
Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 26 PGVTGAAAATATPPAGP--PPAPPPPA----PPPPPLLLSGAPGLPLPPGAAGSPA 75
PG G P GP PP PP P PPPPP + G P P PP G PA
Sbjct: 699 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGM--GMP--PPPPFGFGVPA 750
Score = 32.0 bits (71), Expect = 0.81
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 39 PAGP--PPAPPPPAPPPPPLLLSGAPGLPLPP 68
P GP PP PP PPPP G P P+ P
Sbjct: 724 PGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 755
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 15/56 (26%)
Query: 26 PGVTGAAAATATPPAGPPPAP-------PPPAP------PPPPLLLSGAPGLPLPP 68
PG + PP PPP P PP P PPPP LSG +P PP
Sbjct: 593 PGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPP--LSGDATIPPPP 646
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 19 GTLRALRPGVTGAAAATATPP-----AGPPPAPPPPAP-----PPPPLLLSGAPGLPLPP 68
GT P + G+A PP AG PP PPPP P PPPP L G PG+P PP
Sbjct: 672 GTAIPPPPPLPGSARIPPPPPPLPGSAGIPP-PPPPLPGEAGMPPPPPPLPGGPGIPPPP 730
Query: 69 GAAGSPAV 76
G P +
Sbjct: 731 PFPGGPGI 738
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 26 PGVTGAAAATATPP-----AGPPPAPPP-----PAPPPPPLLLSGAPGLPLPPGAAGSP 74
P + G+A PP AG PP PPP PPPPP G PG+P PP G P
Sbjct: 692 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPF--PGGPGIPPPPPGMGMP 748
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
PG +G P PPPP PPPPP L G + PP G A+
Sbjct: 589 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAI 639
Score = 37.0 bits (84), Expect = 0.025
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 23/79 (29%)
Query: 19 GTLRALRPGVTGAAAATATP--------------PAGPPPAPPPPAP-----PPPPLLLS 59
GT + P ++G A P P G PPPP P PPPP L
Sbjct: 636 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLP 695
Query: 60 GAPGLPLP----PGAAGSP 74
G+ G+P P PG AG P
Sbjct: 696 GSAGIPPPPPPLPGEAGMP 714
Score = 35.0 bits (79), Expect = 0.095
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 31 AAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAA 71
+AAA PP+ P AP PPAPP P G G +PP A
Sbjct: 566 SAAAITVPPSVPSRAPVPPAPPLP-----GDSGTIIPPPPA 601
Score = 35.0 bits (79), Expect = 0.095
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 26 PGVTGAAAATATPP-AGPPPAPPPPAPP-----PPPLLLSGAPGLPLPPGAAGSPAV 76
P + G A + PP +G PPPP P P P L G +P PP GS +
Sbjct: 631 PSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 687
Score = 33.9 bits (76), Expect = 0.21
Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 26 PGVTGAAAATATPPAGP--PPAPPPPA----PPPPPLLLSGAPGLPLPPGAAGSPA 75
PG G P GP PP PP P PPPPP + G P P PP G PA
Sbjct: 708 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGM--GMP--PPPPFGFGVPA 759
Score = 32.0 bits (71), Expect = 0.81
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 39 PAGP--PPAPPPPAPPPPPLLLSGAPGLPLPP 68
P GP PP PP PPPP G P P+ P
Sbjct: 733 PGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLP 764
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 15/56 (26%)
Query: 26 PGVTGAAAATATPPAGPPPAP-------PPPAP------PPPPLLLSGAPGLPLPP 68
PG + PP PPP P PP P PPPP LSG +P PP
Sbjct: 602 PGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPP--LSGDATIPPPP 655
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 17 GRGTLRALRPGVTGAAAATATPP---AGPPPAPPPPAPPPPPLLLSGAPGLPLPP 68
GRG P TG + PP GPP PPPP PPPPP +G PLPP
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPP 417
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/65 (38%), Positives = 28/65 (43%)
Query: 10 QPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPG 69
+P + +G L P G A TP PPP P PPPPP P P PPG
Sbjct: 328 RPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG 387
Query: 70 AAGSP 74
A G P
Sbjct: 388 AGGPP 392
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/67 (41%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 11 PGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPP----PAPPPPPLLLSGAPGLPL 66
P G SG L P GA PP PPP PP PAPPP P L A GL
Sbjct: 373 PATGRSG-----PLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGL-A 426
Query: 67 PPGAAGS 73
P G G+
Sbjct: 427 PGGGRGA 433
Score = 38.9 bits (89), Expect = 0.007
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 14 GTSGR-GTLRALRPGVTGAAAATATPP----AGPPPAPPP------PAPPPPPLLLSGAP 62
G GR G L + G+ PP GPPP PPP P PPPPP GA
Sbjct: 334 GNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPP----GAG 389
Query: 63 GLPLP--------PGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSR 114
G P+P P ++G+ A+V + G GR +++ +++ Q+ ++
Sbjct: 390 GPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPA-GGLAPGGGRGALLDQIRQGIQLNKTP 448
Query: 115 GA 116
GA
Sbjct: 449 GA 450
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.8 bits (112), Expect = 1e-05
Identities = 34/92 (36%), Positives = 34/92 (36%), Gaps = 22/92 (23%)
Query: 10 QPGVGTSGRGTLRALRPGVTGAAAATATPPAGP------------PPAPPPPAPPPPPLL 57
QPG L A P AA PPAGP PP PPPP PP PP
Sbjct: 166 QPGPRAQRAAPLAA--PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQ 223
Query: 58 LSGAPGLPLPP--------GAAGSPAVLREAV 81
P P PP G A P LRE V
Sbjct: 224 QQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPP---APP------PPPLLLSGAPGLPLPPGAAGSP 74
P G A A P A PPPAP P APP PPP + + P LP PP P
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP 221
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 11/98 (11%)
Query: 11 PGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPL--PP 68
PG GT ++ A+ G A+ AT P P P P PP P P GA G P PP
Sbjct: 397 PGSGTRQVFSMAAMNK--EGGTASVATGPDSPSPVPLPPGKPALP----GADGTPFGCPP 450
Query: 69 GAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQE 106
G P+ + VE V ++ G A QE
Sbjct: 451 GRKEKPS---DPVEWTVMDVVEYFTEAGFPEQATAFQE 485
Score = 34.7 bits (78), Expect = 0.12
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 25 RPGVTGAA---AATATPPAGPPPAPPP-PAPPPPPLLLSGAPGLPLPPGAAGS 73
R G T A A P A APPP PAPPPPP ++ A P AA +
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAA 155
Score = 34.3 bits (77), Expect = 0.16
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 6 AQRLQPGV-GTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPP---PAPPPPPLLLSGA 61
A R+QP G + RA R AAAA P PPP P P AP P + A
Sbjct: 96 AARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAA 155
Query: 62 PGLPLPPGAA 71
P PG A
Sbjct: 156 ATAPPSPGPA 165
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 36 ATPPAGP------PPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEA 83
ATPPA P P A APPP P AP P P AA +PA A A
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTP-----APPPPPAPVAAAAPARAPRAAAA 154
Score = 30.4 bits (67), Expect = 2.3
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 31 AAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
AAAA A PP P P PPPP + + AP AA + A
Sbjct: 120 AAAAAAAPP------PTPAPPPPPAPVAAAAPARAPRAAAAAATA 158
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 47.4 bits (111), Expect = 2e-05
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 26 PGVTGAAAATATPPAGPP----------------PAPP-PPAPPPPPLLLSGAPGLPLPP 68
PG G T P GPP P PP PP PP PP +L A LP PP
Sbjct: 1061 PGPAGQKGETVVGPQGPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPPAILGAAVALPGPP 1120
Query: 69 GAAGSPAV 76
G G P +
Sbjct: 1121 GPPGQPGL 1128
Score = 33.5 bits (75), Expect = 0.28
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 25 RPGVTGAAAATATPPA---GPPPAPPPPAPPPPPLLLSGAPGLPLP 67
RPG+ G P GPP P PP PP PP + G P
Sbjct: 913 RPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIKGAIFP 958
Score = 32.0 bits (71), Expect = 0.81
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 18/68 (26%)
Query: 26 PGVTGAAAATATPPAGPPP------APPPPAPP----------PPPLLLSGAPGLPLPPG 69
PG+ GA P GPP P P P P +++ G PGLP PPG
Sbjct: 884 PGMHGAPGPMG--PKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPG 941
Query: 70 AAGSPAVL 77
G P +
Sbjct: 942 PPGPPGAV 949
Score = 29.3 bits (64), Expect = 5.2
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 39 PAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSP 74
P GPP P P P + + G PG P G AG P
Sbjct: 623 PPGPPGLPGIPGKPGTDVFM-GPPGSPGEDGPAGEP 657
Score = 29.3 bits (64), Expect = 5.2
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 13 VGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPP 55
VG G R L PG G P PP PP P PP P
Sbjct: 690 VGEKGDPGNRGL-PGPPGKKGQAGPPGVMGPPGPPGPPGPPGP 731
Score = 28.5 bits (62), Expect = 8.9
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 10 QPGV-GTSGRGTLRALRP--GVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPL 66
QPGV G +G ++ + G G+ P P PP P + G PG P
Sbjct: 665 QPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKKGQAGPPGVMGPPGPPG 724
Query: 67 PPGAAG 72
PPG G
Sbjct: 725 PPGPPG 730
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/41 (60%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 35 TATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
TA PP PPP PPPP PPPPPL PG P+P AG PA
Sbjct: 586 TAAPPPHPPPPPPPP-PPPPPL----PPGQPVP--TAGYPA 619
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 40 AGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLRE--AVEAVVRSFAKHTQGYGR 97
A PPP PPPPAPP PP P P P G SP R + SF H +G R
Sbjct: 94 ARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSFTVHPRGLHR 153
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 40 AGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLRE--AVEAVVRSFAKHTQGYGR 97
A PPP PPPPAPP PP P P P G SP R + SF H +G R
Sbjct: 94 ARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSFTVHPRGLHR 153
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 31/65 (47%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVV 85
P + AA + TPP PPP PP P PP +L S P P P AA + A A +
Sbjct: 1245 PLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTAASSTA 1304
Query: 86 RSFAK 90
S +K
Sbjct: 1305 SSASK 1309
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 47.0 bits (110), Expect = 2e-05
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 11 PGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPA--PPPPAPPPPPLLLSGAPGLPLPP 68
P VG++ G GA A P A P PA P P P P PL P LPLPP
Sbjct: 135 PSVGSARSSVSSLGSRGSAGAYADFLPPGACPAPARSPEPAGPAPFPL-----PALPLPP 189
Query: 69 GAAGSPAVLREAVEAVVRSFAK 90
G G P+ +EA+ R +
Sbjct: 190 GREGGPSAAERRLEALTRELER 211
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 46.2 bits (108), Expect = 4e-05
Identities = 23/43 (53%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 32 AAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSP 74
AAA P GPPPAPPP PPPPP + P PP A SP
Sbjct: 768 AAAPQYPGRGPPPAPPP--PPPPPRAPADPAASPDPPSAVASP 808
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 23 ALRPGVTGAAAATATPPAGPP---PAPPPPAPPPPPLLLSGAPGLPLP---PGAAG 72
A P G A PP PP PA P +P PP + S GL P PG +G
Sbjct: 768 AAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSG 823
Score = 32.3 bits (72), Expect = 0.62
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 30 GAAAATATP-PAGPPPAPPPPAPPPPPLLLSGAPG-LPLPPGAAGSPAVLREAVEAVVRS 87
GAA P P PP P P AP PPP PG LPLP V++ + E ++ S
Sbjct: 840 GAAEEEGVPRPRAPPEPPDPGAPRPPP-----DPGPLPLPGPREKPTFVVQVSTEQLLMS 894
Score = 32.0 bits (71), Expect = 0.81
Identities = 29/79 (36%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 6 AQRLQPGVGTS---GRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPP---PLLLS 59
A RL G G G GT PG +G A P PPPP PPPP P L
Sbjct: 1133 AGRLDLGSGGRAPVGTGTAPGGGPG-SGVDAKAGWVDNTRPQPPPPPLPPPPEAQPRRLE 1191
Query: 60 GAPGLP----LPPGAAGSP 74
AP P G G+P
Sbjct: 1192 PAPPRARPEVAPEGEPGAP 1210
Score = 31.2 bits (69), Expect = 1.4
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 16/101 (15%)
Query: 39 PAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAV----VRSFAKHTQG 94
P PPP PPPP P P A P PG SP L + V + + ++G
Sbjct: 445 PPRPPPPPPPPRDGPFPWPWPPAHSAP-RPGTLSSPFPLLDGFPGADPDDVLTVTESSRG 503
Query: 95 YGRVNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPP 135
L+ W+ K RGA GA P+++PP
Sbjct: 504 LN-------LECLWE-KARRGAGRGGGAPA---WQPASAPP 533
Score = 28.9 bits (63), Expect = 6.8
Identities = 17/50 (34%), Positives = 20/50 (40%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRS 87
PP P P P P P P PL L G P + +L E V R+
Sbjct: 853 PPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRN 902
Score = 28.5 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLP 65
PP G PPAPP PP + G P
Sbjct: 1405 PPEGDTDPSTPPAPPTPPHPATPGDGFP 1432
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 45.8 bits (107), Expect = 5e-05
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 30 GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLP-------LPPGAAGSP 74
G+ TPP PPP PPPP PPPPP L S G P LPP G P
Sbjct: 592 GSPPPAPTPPQQPPPPPPPP-PPPPPYLASLPLGYPPHQPAYLLPPRPDGPP 642
Score = 33.5 bits (75), Expect = 0.28
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 39 PAGPPPAPPPPAPPPPP 55
P GPPP PP PPPPP
Sbjct: 638 PDGPPPPEYPPPPPPPP 654
Score = 33.1 bits (74), Expect = 0.36
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 31 AAAATATPPAGP--PPAPP--PPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAV 84
A +PP+ P PP PP PPAP P P +P LPP V A+E V
Sbjct: 1119 AGPTEESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIPLLPPPKKRRKTVSFSAIEVV 1176
Score = 32.3 bits (72), Expect = 0.62
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 31 AAAATATPPAGPPPAPPP-PAPPPPPLLLSGAPGLPLPPGAAGSPA 75
AA +A+PP P P P P P P ++G+P PLP A SPA
Sbjct: 1072 AALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEA-SPA 1116
Score = 31.2 bits (69), Expect = 1.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 38 PPAGPPPAPPPPAPPPP 54
P PPP PPP PPPP
Sbjct: 638 PDGPPPPEYPPPPPPPP 654
Score = 29.6 bits (65), Expect = 4.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPG-LPLPPGAAGSPAVL 77
A+ PAGP PP AP PP +G P P P SP L
Sbjct: 1113 ASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIPL 1157
Score = 28.5 bits (62), Expect = 8.9
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 39 PAGPPPAPPPPAPPPPPLLLSGAP-GLPLPPGAAGSP 74
PA P A PPP P P + AP +P+P AGSP
Sbjct: 1071 PAALPSASPPPREVPVP---TPAPVEVPVPERVAGSP 1104
Score = 28.5 bits (62), Expect = 8.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAP 62
A A P P PA PP P P P L +P
Sbjct: 1303 ALAVKPTPPAPALRPPEPVPAPAALFSSP 1331
Score = 28.5 bits (62), Expect = 8.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 46 PPPPAPPPPP 55
PPPP PPPPP
Sbjct: 1403 PPPPPPPPPP 1412
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 45.1 bits (105), Expect = 9e-05
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 25 RPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAV 84
RPG + A PP PPPAPP PPPPP P P PPG +P EA+
Sbjct: 9 RPGESPGATPAPGPPPPPPPAPPQQQPPPPP------PPAP-PPGPGPAPPQHPPRAEAL 61
Query: 85 VRSFAKHTQGYGRV 98
A GR+
Sbjct: 62 PPEAADEGGPRGRL 75
Score = 39.7 bits (91), Expect = 0.004
Identities = 18/43 (41%), Positives = 19/43 (44%)
Query: 30 GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAG 72
G +P A P P PPPP PP PP P P PP G
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPG 48
Score = 38.1 bits (87), Expect = 0.011
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 7 QRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPL 66
Q +P VG G+ R +R G A A A+P GPPP PP P P +P L
Sbjct: 741 QVARPLVGPLALGSPRLVRRPPPGPAPAAASP--GPPPPASPPGAPASPRAPRTSPYGGL 798
Query: 67 PPGAAGSPAV 76
P PA+
Sbjct: 799 PAAPLAGPAL 808
Score = 36.6 bits (83), Expect = 0.033
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLR 78
P G+ PP GP PA P PPPP PPGA SP R
Sbjct: 749 PLALGSPRLVRRPPPGPAPAAASPGPPPPAS----------PPGAPASPRAPR 791
Score = 35.4 bits (80), Expect = 0.073
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 27 GVTGAAAATATPPAGPPPAPPPP----APPPPPLLLSGAPGLPLPP 68
G G + P PPP PP P PPPPP PG P PP
Sbjct: 8 GRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPG-PAPP 52
Score = 28.5 bits (62), Expect = 8.9
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLS------GAPGLPLPPGAAGSPAVLRE 79
PG + A T P G PA P P P LS A LP GA G A R
Sbjct: 781 PGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRP 840
Query: 80 AVEAVVR 86
A + R
Sbjct: 841 ASSSTPR 847
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 45.1 bits (105), Expect = 9e-05
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 31 AAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSP 74
AA + PP PP A P P PPPPP AP P PP AA +P
Sbjct: 11 AAPPPSQPPQAPPQAQPQPPPPPPP----AAPQPPQPPTAAATP 50
Score = 30.0 bits (66), Expect = 3.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPP 55
P A A P PPP P P PP PP
Sbjct: 15 PSQPPQAPPQAQPQPPPPPPPAAPQPPQPP 44
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 45.1 bits (105), Expect = 9e-05
Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 38 PPAGPPPAPPPPAPPPPPLLLSGAPGLPLPP 68
PP PPP P PP PPPPPL P LPLPP
Sbjct: 45 PPPPPPPPPLPPPPPPPPL-----PPLPLPP 70
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.1 bits (105), Expect = 9e-05
Identities = 30/74 (40%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 24 LRPGVTGAAAATATPPAGPPPAPP--------------PP--APPPPPLLLSGAPGLPLP 67
LRPG G PP GP P PP PP APPPPPLLL P P
Sbjct: 128 LRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----P 183
Query: 68 PGAAGSPAVLREAV 81
P A P + EA+
Sbjct: 184 PSMAPPPPPVLEAL 197
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/42 (52%), Positives = 22/42 (52%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
A PPA P P P PP PPP P L AP LP AA PA
Sbjct: 387 AGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 19 GTLRALRPGVT--GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
G L+A P G + + A AG PP PP PP PPL P PLPP A P
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPL---PPPAPPLPPAAPPLPCA 420
Query: 77 LREA 80
+ A
Sbjct: 421 QKAA 424
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 21 LRALRPGVTGAAAATATPPAGPPPAPPPP--APPPPPLLLSGAPGLPLPPGAAGS 73
L AL P T ++ + TPP PPAPP APPPPP + + AP P P G+
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP-VPAPAPPAPASPHTVGT 247
Score = 37.0 bits (84), Expect = 0.025
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 26 PGVTGAAAATATPPAGPP-----PAPPPPAPPPPPLLLS-------GAPGLPLPP 68
PG + + +T P PP P PP APPPPP+L + +P +P PP
Sbjct: 158 PGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP 212
Score = 32.0 bits (71), Expect = 0.81
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
P V A + T + P PP PP PPL P P+P A +PA
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.1 bits (105), Expect = 9e-05
Identities = 30/74 (40%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 24 LRPGVTGAAAATATPPAGPPPAPP--------------PP--APPPPPLLLSGAPGLPLP 67
LRPG G PP GP P PP PP APPPPPLLL P P
Sbjct: 128 LRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----P 183
Query: 68 PGAAGSPAVLREAV 81
P A P + EA+
Sbjct: 184 PSMAPPPPPVLEAL 197
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/42 (52%), Positives = 22/42 (52%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
A PPA P P P PP PPP P L AP LP AA PA
Sbjct: 387 AGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 19 GTLRALRPGVT--GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
G L+A P G + + A AG PP PP PP PPL P PLPP A P
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPL---PPPAPPLPPAAPPLPCA 420
Query: 77 LREA 80
+ A
Sbjct: 421 QKAA 424
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 21 LRALRPGVTGAAAATATPPAGPPPAPPPP--APPPPPLLLSGAPGLPLPPGAAGS 73
L AL P T ++ + TPP PPAPP APPPPP + + AP P P G+
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP-VPAPAPPAPASPHTVGT 247
Score = 37.0 bits (84), Expect = 0.025
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 26 PGVTGAAAATATPPAGPP-----PAPPPPAPPPPPLLLS-------GAPGLPLPP 68
PG + + +T P PP P PP APPPPP+L + +P +P PP
Sbjct: 158 PGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP 212
Score = 32.0 bits (71), Expect = 0.81
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
P V A + T + P PP PP PPL P P+P A +PA
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 45.1 bits (105), Expect = 9e-05
Identities = 30/74 (40%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 24 LRPGVTGAAAATATPPAGPPPAPP--------------PP--APPPPPLLLSGAPGLPLP 67
LRPG G PP GP P PP PP APPPPPLLL P P
Sbjct: 128 LRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----P 183
Query: 68 PGAAGSPAVLREAV 81
P A P + EA+
Sbjct: 184 PSMAPPPPPVLEAL 197
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/42 (52%), Positives = 22/42 (52%)
Query: 34 ATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
A PPA P P P PP PPP P L AP LP AA PA
Sbjct: 387 AGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA 428
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 19 GTLRALRPGVT--GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAV 76
G L+A P G + + A AG PP PP PP PPL P PLPP A P
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPL---PPPAPPLPPAAPPLPCA 420
Query: 77 LREA 80
+ A
Sbjct: 421 QKAA 424
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 21 LRALRPGVTGAAAATATPPAGPPPAPPPP--APPPPPLLLSGAPGLPLPPGAAGS 73
L AL P T ++ + TPP PPAPP APPPPP + + AP P P G+
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP-VPAPAPPAPASPHTVGT 247
Score = 37.0 bits (84), Expect = 0.025
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 26 PGVTGAAAATATPPAGPP-----PAPPPPAPPPPPLLLS-------GAPGLPLPP 68
PG + + +T P PP P PP APPPPP+L + +P +P PP
Sbjct: 158 PGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPP 212
Score = 32.0 bits (71), Expect = 0.81
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 26 PGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPA 75
P V A + T + P PP PP PPL P P+P A +PA
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,635,744
Number of Sequences: 37866
Number of extensions: 978074
Number of successful extensions: 48041
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 762
Number of HSP's that attempted gapping in prelim test: 15783
Number of HSP's gapped (non-prelim): 17317
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.