Guide to the Human Genome
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Name: GLTSCR2 Sequence: fasta or formatted (478aa) NCBI GI: 239787829
Description:

glioma tumor suppressor candidate region gene 2

Referenced in:

Nucleus and Nucleolus
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         47           2
 C cysteine            0.4          2           1
 D aspartate           4.4         21           1
 E glutamate           9.6         46           2
 F phenylalanine       2.9         14           2
 G glycine             6.1         29           2
 H histidine           1.3          6           1
 I isoleucine          1.3          6           1
 K lysine              9.0         43           3
 L leucine            11.9         57           3
 M methionine          0.4          2           1
 N asparagine          1.9          9           1
 P proline             6.3         30           1
 Q glutamine           6.7         32           2
 R arginine           12.6         60           5
 S serine              4.8         23           2
 T threonine           4.2         20           2
 V valine              5.0         24           1
 W tryptophan          0.6          3           1
 Y tyrosine            0.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glioma tumor suppressor candidate region gene 2 [Ho... 
TCHH                  0.029   trichohyalin 
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
PLEC1                 0.020   plectin 1 isoform 11 
PLEC1                 0.020   plectin 1 isoform 10 
PLEC1                 0.020   plectin 1 isoform 8 
PLEC1                 0.020   plectin 1 isoform 7 
PLEC1                 0.020   plectin 1 isoform 6 
PLEC1                 0.020   plectin 1 isoform 3 
PLEC1                 0.020   plectin 1 isoform 2 
PLEC1                 0.020   plectin 1 isoform 1 
LOC100286959          0.018   PREDICTED: hypothetical protein XP_002343921 
AUTS2                 0.016   autism susceptibility candidate 2 isoform 2 
AUTS2                 0.016   autism susceptibility candidate 2 isoform 1 
MAP7D1                0.016   MAP7 domain containing 1 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.016   GRB10 interacting GYF protein 2 isoform b 
MLLT4                 0.016   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MYH14                 0.016   myosin, heavy chain 14 isoform 1 
MYH14                 0.016   myosin, heavy chain 14 isoform 2 
MYH14                 0.016   myosin, heavy chain 14 isoform 3 
MYH7B                 0.016   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
CROCC                 0.015   ciliary rootlet coiled-coil 
NEXN                  0.015   nexilin (F actin binding protein) 
CCHCR1                0.014   coiled-coil alpha-helical rod protein 1 isoform 1 [...
AZI1                  0.014   5-azacytidine induced 1 isoform b 
MAP7D2                0.014   MAP7 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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