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Search of human proteins with 239758051
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758051 PREDICTED: hypothetical protein [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758051 PREDICTED: hypothetical protein [Homo sapiens] 507 e-144
gi|54607077 ankyrin repeat domain 57 [Homo sapiens] 89 3e-18
gi|55741655 anoctamin 8 [Homo sapiens] 37 0.012
gi|154759273 testis specific, 10 interacting protein [Homo sapiens] 37 0.016
gi|239757898 PREDICTED: similar to testis expressed sequence 13A... 37 0.020
gi|21361337 eukaryotic translation initiation factor 5 [Homo sap... 36 0.035
gi|37537716 eukaryotic translation initiation factor 5 [Homo sap... 36 0.035
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.059
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 35 0.077
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 35 0.077
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 35 0.077
gi|169206162 PREDICTED: hypothetical protein [Homo sapiens] 34 0.10
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 34 0.10
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 34 0.13
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 33 0.17
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 33 0.17
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.22
gi|169164474 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.22
gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo sap... 33 0.22
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.22
gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo sap... 33 0.22
gi|40556370 PHD finger protein 15 [Homo sapiens] 33 0.22
gi|239752412 PREDICTED: similar to testis expressed sequence 13A... 33 0.29
gi|169216868 PREDICTED: similar to testis expressed sequence 13A... 33 0.29
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 33 0.29
gi|13899327 nuclear receptor interacting protein 2 [Homo sapiens] 33 0.29
gi|28557729 hypothetical protein LOC283687 [Homo sapiens] 33 0.29
gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens] 32 0.38
gi|28372567 zinc finger protein 575 [Homo sapiens] 32 0.38
>gi|239758051 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 507 bits (1305), Expect = e-144
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MRSAAFTIPSLKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQT 60
MRSAAFTIPSLKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQT
Sbjct: 1 MRSAAFTIPSLKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQT 60
Query: 61 SKDLEPPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLR 120
SKDLEPPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLR
Sbjct: 61 SKDLEPPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLR 120
Query: 121 TPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGLRWGVDSLGGCPRASQPAGHSGL 180
TPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGLRWGVDSLGGCPRASQPAGHSGL
Sbjct: 121 TPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGLRWGVDSLGGCPRASQPAGHSGL 180
Query: 181 HHTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQGQSYTALHLAAMYLGDGEAASGNIG 240
HHTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQGQSYTALHLAAMYLGDGEAASGNIG
Sbjct: 181 HHTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQGQSYTALHLAAMYLGDGEAASGNIG 240
Query: 241 RRC 243
RRC
Sbjct: 241 RRC 243
>gi|54607077 ankyrin repeat domain 57 [Homo sapiens]
Length = 525
Score = 89.0 bits (219), Expect = 3e-18
Identities = 84/224 (37%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 24 ELGKGEP-SPCTGRPEQRG-RRKSSLAPPAPTPDA-GPQTSKDLEPPPHGCQEADRGGSW 80
ELG+GEP +P P G RRK+S P P P S+DLE PPHGC+EADRG S
Sbjct: 133 ELGEGEPPAPAHWPPLSAGARRKNSRRDVQPLPRTPAPGPSEDLELPPHGCEEADRGSSL 192
Query: 81 -GATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRV--TLAAQRWLSRP 137
GAT RP RQNL DL S LKR++CPGGSS G+ R + +A S
Sbjct: 193 VGATAQRPARQNLRDLVMGSSPQLKRSVCPGGSSPGSSSGGGRGRGGGDSDSASVASSSA 252
Query: 138 QRRAVGLGE-----LDQGAQLAALGLRWGVDSLGGCPRASQP--------AGHSGLHHTL 184
+ + G G L+ L+A +W DSL G G + LH
Sbjct: 253 EEESSGGGSVTLDPLEHAWMLSASDGKW--DSLEGLLTCEPGLLVKRDFITGFTCLHWAA 310
Query: 185 TCLRRHLALQAGASGHAGQLPQRASAAWEQQGQSYTALHLAAMY 228
R+ L + QLP A + YTALHLAAM+
Sbjct: 311 KHGRQELLAMLVNFANKHQLPVNIDA---RTSGGYTALHLAAMH 351
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 37.4 bits (85), Expect = 0.012
Identities = 33/102 (32%), Positives = 35/102 (34%), Gaps = 24/102 (23%)
Query: 24 ELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGAT 83
E G G G P R RR S APP P P P T PP GC + D G WG
Sbjct: 1107 EEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPRPPT------PPAGCWQWD--GPWGC- 1157
Query: 84 TSRPFRQNLSDLGRHSVLP---LKRNLCPGGSSLGAPPLRTP 122
G P L CP + G PP P
Sbjct: 1158 ------------GGEGAAPRQALAAAECPPCAMAGPPPAPQP 1187
>gi|154759273 testis specific, 10 interacting protein [Homo sapiens]
Length = 556
Score = 37.0 bits (84), Expect = 0.016
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 22 RAELGK-GEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSW 80
R +LG G S TG+ E S L P P +G + K ++ G +EA+RG S
Sbjct: 172 RQQLGAWGGVSIPTGKGELGSEPPSGLQLPGRRPGSGSASDKQVQLQSLGAEEAERGLSS 231
Query: 81 GATTSRPFRQNLSD 94
G RP R ++S+
Sbjct: 232 GVLPQRPRRGSISE 245
>gi|239757898 PREDICTED: similar to testis expressed sequence 13A
[Homo sapiens]
Length = 652
Score = 36.6 bits (83), Expect = 0.020
Identities = 53/191 (27%), Positives = 74/191 (38%), Gaps = 34/191 (17%)
Query: 45 SSLAPPAPTPDAGPQTSKDLEPPPHG---CQEADRG---GSWGATTSRPFRQNLSDLGRH 98
+ + PP P P G Q +++ PP + QE D GS+ SR Q R
Sbjct: 263 TEIHPPCPWPAVGFQ--EEMAPPWYQRSYIQEEDSKILQGSFPLGDSRSHSQGEGS-ERS 319
Query: 99 SVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGL 158
+PL PG S P +PQ L + S+ E +G Q
Sbjct: 320 QRMPL-----PGDSGCHNPLSESPQGTAPLGSSGCHSQE--------EGTEGPQ------ 360
Query: 159 RWGVDSLGGCPRASQPAGHSGLH--HTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQG 216
G+D LG R +Q G HTL R H + G G G +PQ S ++ Q+G
Sbjct: 361 --GMDPLGNRERQNQKEGPKRARRMHTLVFRRSHKS--EGPEGPQGTVPQGDSRSYSQEG 416
Query: 217 QSYTALHLAAM 227
S A +A +
Sbjct: 417 CSDRAQEMATL 427
>gi|21361337 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 35.8 bits (81), Expect = 0.035
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 35 GRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGA-TTSRPFRQNLS 93
G+ ++ G SS PP P P ++ PPPH +E + WG TT R+ +
Sbjct: 165 GKDKENGSVSSSETPPPPPPP------NEINPPPHTMEE-EEDDDWGEDTTEEAQRRRMD 217
Query: 94 DLGRHS-VLPLKRNL 107
++ H+ VL L +L
Sbjct: 218 EISDHAKVLTLSDDL 232
>gi|37537716 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 35.8 bits (81), Expect = 0.035
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 35 GRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGA-TTSRPFRQNLS 93
G+ ++ G SS PP P P ++ PPPH +E + WG TT R+ +
Sbjct: 165 GKDKENGSVSSSETPPPPPPP------NEINPPPHTMEE-EEDDDWGEDTTEEAQRRRMD 217
Query: 94 DLGRHS-VLPLKRNL 107
++ H+ VL L +L
Sbjct: 218 EISDHAKVLTLSDDL 232
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.0 bits (79), Expect = 0.059
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 9 PSLKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPP 68
P+ + P+ + E SP + +P + R SS +P +P P P + +++ P
Sbjct: 399 PTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASS-SPESPKPAPAPGSHREISSSP 457
Query: 69 ------HGCQEADRGGSWGATTSRPFRQNLSDL----GR-HSVLPLKRNLCPGGSSLGAP 117
HG A R S T SR ++ S GR S P KR G
Sbjct: 458 TSKNRSHG--RAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKR---------GHS 506
Query: 118 PLRTPQRRVTLAAQRW--LSRPQRR 140
R+PQ R + +AQRW PQRR
Sbjct: 507 RSRSPQWRRSRSAQRWGRSRSPQRR 531
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 34.7 bits (78), Expect = 0.077
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Query: 22 RAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWG 81
+A G PSP G G K + P P P + L P P G +E +
Sbjct: 719 QAPAGSPAPSPSPG-----GDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPA 773
Query: 82 ATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQ 138
+ P R+ LS G + P L P GSS P L + + Q + S P+
Sbjct: 774 SPPRVPPREPLSPQGSRTPSP----LVPPGSSPLPPRLSSSPGKTMPTTQSFASDPK 826
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 34.7 bits (78), Expect = 0.077
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Query: 22 RAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWG 81
+A G PSP G G K + P P P + L P P G +E +
Sbjct: 797 QAPAGSPAPSPSPG-----GDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPA 851
Query: 82 ATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQ 138
+ P R+ LS G + P L P GSS P L + + Q + S P+
Sbjct: 852 SPPRVPPREPLSPQGSRTPSP----LVPPGSSPLPPRLSSSPGKTMPTTQSFASDPK 904
>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
Length = 1992
Score = 34.7 bits (78), Expect = 0.077
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 15/169 (8%)
Query: 8 IPSLKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPP 67
+PSL++ + + +TG S R RR+ +A P +A ++ +
Sbjct: 317 LPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQEAVNSSAARTDEA 376
Query: 68 PHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPG-GSSLGAPPLRTPQRRV 126
P G G+ G TTS + S++GR L R L P LG + R +
Sbjct: 377 PQGA-----AGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTI 431
Query: 127 TLAAQRWLSRPQRRAVGLGELDQGAQLAA------LGLRWGVDSLGGCP 169
A S+ Q+ GL D+ QL A L + ++LGG P
Sbjct: 432 GSGAS---SKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFP 477
>gi|169206162 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 34.3 bits (77), Expect = 0.10
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 18/78 (23%)
Query: 28 GEPSPCTGRPEQRGRRKSSLAPP------APTPDAGPQT------------SKDLEPPPH 69
G PC G PE RGR++ L P +P+ D GP++ S + PPP
Sbjct: 21 GASPPCDGGPESRGRKRGCLLSPCLVGVASPSCDDGPKSQRGKRGWLSVPASLGVPPPPA 80
Query: 70 GCQEADRGGSWGATTSRP 87
RGG + S P
Sbjct: 81 IGVLRSRGGRGAGSQSPP 98
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 34.3 bits (77), Expect = 0.10
Identities = 35/127 (27%), Positives = 45/127 (35%), Gaps = 18/127 (14%)
Query: 102 PLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGLRWG 161
P CP G P+ P R +Q W + R + E + ++AAL R G
Sbjct: 17 PTDLGSCP---PCGPCPIPKPAARGRRQSQDW-GKSDERLLQAVENNDAPRVAALIARKG 72
Query: 162 VDSLGGCPRASQPAGHSGLHHTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQGQSYTA 221
+ P P G S H LA GA+ + S G Y A
Sbjct: 73 L-----VPTKLDPEGKSAFH---------LAAMRGAASCLEVMIAHGSNVMSADGAGYNA 118
Query: 222 LHLAAMY 228
LHLAA Y
Sbjct: 119 LHLAAKY 125
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 33.9 bits (76), Expect = 0.13
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 38 EQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGATTSRPFRQNLSDLGR 97
+Q G K +L PA TP GP+ PPP G + P + N S+
Sbjct: 1001 DQNGNSKRALGDPA-TPTEGPR-----RPPPRPPCRLSMGRRHKLCSPDPGQANNSEGSD 1054
Query: 98 HSVLPLKR-NLCPGGSSLGAP---PLRTPQRRVTLAA 130
H LPL R PG L AP +R Q R+ A+
Sbjct: 1055 HDYLPLVRLQEAPGSFRLDAPFCAAVRISQERLCRAS 1091
Score = 30.8 bits (68), Expect = 1.1
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 33 CTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWG----------- 81
C+ PE S P P+ S LEPP Q+ R +WG
Sbjct: 670 CSASPEPGPGSTGSSESPGSQGPGSPEGSAPLEPP---SQQGCRSLAWGEPAGSRSCPLP 726
Query: 82 ATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQ-----RRVTLAAQRWLSR 136
A T PF+ VL + G SL +PP R Q R+ +L A
Sbjct: 727 APTPAPFKVGALST---EVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPS 783
Query: 137 PQ-RRAVGLGELDQGAQLAALGLRW 160
P+ + +G G D G L+ + W
Sbjct: 784 PEPGQQLGQGLDDSGNLLSPAPMDW 808
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 33.5 bits (75), Expect = 0.17
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 37/135 (27%)
Query: 7 TIPS-LKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLE 65
T PS L+ W+P+ + ++ G+ + P G+P+ P P P GP+ ++ +
Sbjct: 401 TAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQ-----------PRPPPQGGPRQAQSPQ 448
Query: 66 PPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPL----KRNLCPGG-----SSLGA 116
P R GS P +Q LS G+ + P ++ PG +S G+
Sbjct: 449 P--------QRSGS-------PSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGS 493
Query: 117 PPLRTPQRRVTLAAQ 131
P + + TLA+Q
Sbjct: 494 SPNQASKPGATLASQ 508
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 33.5 bits (75), Expect = 0.17
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 37/135 (27%)
Query: 7 TIPS-LKQWSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLE 65
T PS L+ W+P+ + ++ G+ + P G+P+ P P P GP+ ++ +
Sbjct: 402 TAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQ-----------PRPPPQGGPRQAQSPQ 449
Query: 66 PPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPL----KRNLCPGG-----SSLGA 116
P R GS P +Q LS G+ + P ++ PG +S G+
Sbjct: 450 P--------QRSGS-------PSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGS 494
Query: 117 PPLRTPQRRVTLAAQ 131
P + + TLA+Q
Sbjct: 495 SPNQASKPGATLASQ 509
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 28 GEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGATTS-R 86
G PSP R + + L P P P A P+ PP G +++ S +TT
Sbjct: 170 GTPSPAMARRSRAAGTEVGL--PRPAPSARPR------PPTEGPRKSVSSASEHSTTEPS 221
Query: 87 PFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAV 142
P + G P R+L + L +P P R T A S+P+ + +
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Score = 31.2 bits (69), Expect = 0.85
Identities = 35/126 (27%), Positives = 43/126 (34%), Gaps = 24/126 (19%)
Query: 16 PRCSTGRA-ELGKGEPSPCTGRPEQRG--------RRKSSLAPPAPTPD-AGPQTSKDLE 65
PR S A E EPSP R G R SS A P +P +GP
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 66 PPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRR 125
P H Q +G L L V P +++ P L + PL TP
Sbjct: 265 APAHPSQPKPKG--------------LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 310
Query: 126 VTLAAQ 131
L +Q
Sbjct: 311 AALQSQ 316
>gi|169164474 PREDICTED: hypothetical protein [Homo sapiens]
Length = 259
Score = 33.1 bits (74), Expect = 0.22
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 70 GCQEADRGGSWGATTSRPFRQNL------SDLGRHSVLPLKRNLCPGGSSLGAPPL---R 120
GC A RGG G + P R + S PL R L G ++ G P L
Sbjct: 96 GCARATRGGDLGWAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPSLPGAT 155
Query: 121 TPQ-RRVTLAAQRWLSRPQRRAVGLGELDQGAQLAAL-GLRWGVDSLGGCPRAS--QPAG 176
TP+ RR + W R R L G G+ + G P+ + QP
Sbjct: 156 TPRPRRCCVPRDLWGGRESLRVPFQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGE 215
Query: 177 H-SGLHHTLTCLRR----HLALQAGA 197
GL + C+RR H+ Q+GA
Sbjct: 216 RPCGLQVPVGCVRRGQKNHVFFQSGA 241
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 28 GEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGATTS-R 86
G PSP R + + L P P P A P+ PP G +++ S +TT
Sbjct: 170 GTPSPAMARRSRAAGTEVGL--PRPAPSARPR------PPTEGPRKSVSSASEHSTTEPS 221
Query: 87 PFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAV 142
P + G P R+L + L +P P R T A S+P+ + +
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Score = 29.3 bits (64), Expect = 3.2
Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 24/124 (19%)
Query: 16 PRCSTGRA-ELGKGEPSPCTGRPEQRG--------RRKSSLAPPAPTPD-AGPQTSKDLE 65
PR S A E EPSP R G R SS A P +P +GP
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 66 PPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRR 125
P H Q +G L L V P +++ P L + PL TP
Sbjct: 265 APAHPSQPKPKG--------------LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 310
Query: 126 VTLA 129
T A
Sbjct: 311 GTKA 314
>gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo
sapiens]
Length = 259
Score = 33.1 bits (74), Expect = 0.22
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 70 GCQEADRGGSWGATTSRPFRQNL------SDLGRHSVLPLKRNLCPGGSSLGAPPL---R 120
GC A RGG G + P R + S PL R L G ++ G P L
Sbjct: 96 GCARATRGGDLGWAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPSLPGAT 155
Query: 121 TPQ-RRVTLAAQRWLSRPQRRAVGLGELDQGAQLAAL-GLRWGVDSLGGCPRAS--QPAG 176
TP+ RR + W R R L G G+ + G P+ + QP
Sbjct: 156 TPRPRRCCVPRDLWGGRESLRVPFQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGE 215
Query: 177 H-SGLHHTLTCLRR----HLALQAGA 197
GL + C+RR H+ Q+GA
Sbjct: 216 RPCGLQVPVGCVRRGQKNHVFFQSGA 241
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 28 GEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGATTS-R 86
G PSP R + + L P P P A P+ PP G +++ S +TT
Sbjct: 161 GTPSPAMARRSRAAGTEVGL--PRPAPSARPR------PPTEGPRKSVSSASEHSTTEPS 212
Query: 87 PFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAV 142
P + G P R+L + L +P P R T A S+P+ + +
Sbjct: 213 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL 268
Score = 28.9 bits (63), Expect = 4.2
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 24/117 (20%)
Query: 16 PRCSTGRA-ELGKGEPSPCTGRPEQRG--------RRKSSLAPPAPTPD-AGPQTSKDLE 65
PR S A E EPSP R G R SS A P +P +GP
Sbjct: 196 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 255
Query: 66 PPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLKRNLCPGGSSLGAPPLRTP 122
P H Q +G L L V P +++ P L + PL TP
Sbjct: 256 APAHPSQPKPKG--------------LQALRPPQVTPPRKDAAPALGPLSSSPLATP 298
>gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 259
Score = 33.1 bits (74), Expect = 0.22
Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 70 GCQEADRGGSWGATTSRPFRQNL------SDLGRHSVLPLKRNLCPGGSSLGAPPL---R 120
GC A RGG G + P R + S PL R L G ++ G P L
Sbjct: 96 GCARATRGGDLGWAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPSLPGAT 155
Query: 121 TPQ-RRVTLAAQRWLSRPQRRAVGLGELDQGAQLAAL-GLRWGVDSLGGCPRAS--QPAG 176
TP+ RR + W R R L G G+ + G P+ + QP
Sbjct: 156 TPRPRRCCVPRDLWGGRESLRVPFQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGE 215
Query: 177 H-SGLHHTLTCLRR----HLALQAGA 197
GL + C+RR H+ Q+GA
Sbjct: 216 RPCGLQVPVGCVRRGQKNHVFFQSGA 241
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 33.1 bits (74), Expect = 0.22
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 29 EPSPCTGRPEQRGRRKSSLA----PPAPTPDAGP--QTSKDLEPPPHGCQEADRG-GSWG 81
+PS G P ++ R ++ L PP P P GP +T+ D P Q+A G G G
Sbjct: 582 DPSLRPGDPARKARGRTRLPAKKKPPPPPPQDGPGSRTTPDKAPKKTWGQDAGSGKGGQG 641
Query: 82 ATTSRPFRQNLSDL 95
T +P R+ S L
Sbjct: 642 PPTRKPPRRTSSHL 655
>gi|239752412 PREDICTED: similar to testis expressed sequence 13A
[Homo sapiens]
Length = 652
Score = 32.7 bits (73), Expect = 0.29
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 34/191 (17%)
Query: 45 SSLAPPAPTPDAGPQTSKDLEPPPHG---CQEADRG---GSWGATTSRPFRQNLSDLGRH 98
+ + PP P P G Q +++ P + QE D GS+ SR Q R
Sbjct: 263 TEIHPPCPWPAVGFQ--EEMAPLWYQRSYIQEEDSKILQGSFPLGDSRSHSQGEGS-ERS 319
Query: 99 SVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGL 158
+PL PG S P +PQ L + S+ E +G Q
Sbjct: 320 QRMPL-----PGDSGCHNPLSESPQGTAPLGSSGCHSQE--------EGTEGPQ------ 360
Query: 159 RWGVDSLGGCPRASQPAGHSGLH--HTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQG 216
G+D LG R +Q G HTL R H + G G G +PQ S ++ Q+G
Sbjct: 361 --GMDPLGNRERQNQKEGPKRARRMHTLVFRRSHKS--EGPEGPQGTVPQGDSRSYSQEG 416
Query: 217 QSYTALHLAAM 227
S A +A +
Sbjct: 417 CSDRAQEMATL 427
>gi|169216868 PREDICTED: similar to testis expressed sequence 13A
[Homo sapiens]
Length = 714
Score = 32.7 bits (73), Expect = 0.29
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 34/191 (17%)
Query: 45 SSLAPPAPTPDAGPQTSKDLEPPPHG---CQEADRG---GSWGATTSRPFRQNLSDLGRH 98
+ + PP P P G Q +++ P + QE D GS+ SR Q R
Sbjct: 263 TEIHPPCPWPAVGFQ--EEMAPLWYQRSYIQEEDSKILQGSFPLGDSRSHSQGEGS-ERS 319
Query: 99 SVLPLKRNLCPGGSSLGAPPLRTPQRRVTLAAQRWLSRPQRRAVGLGELDQGAQLAALGL 158
+PL PG S P +PQ L + S+ E +G Q
Sbjct: 320 QRMPL-----PGDSGCHNPLSESPQGTAPLGSSGCHSQE--------EGTEGPQ------ 360
Query: 159 RWGVDSLGGCPRASQPAGHSGLH--HTLTCLRRHLALQAGASGHAGQLPQRASAAWEQQG 216
G+D LG R +Q G HTL R H + G G G +PQ S ++ Q+G
Sbjct: 361 --GMDPLGNRERQNQKEGPKRARRMHTLVFRRSHKS--EGPEGPQGTVPQGDSRSYSQEG 416
Query: 217 QSYTALHLAAM 227
S A +A +
Sbjct: 417 CSDRAQEMATL 427
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 32.7 bits (73), Expect = 0.29
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 28 GEPSPCTGRPEQRGRRKSSLAPPAPTPDAGP-----QTSKDLEPPPHG-CQEADRGGSWG 81
G + C P S + P P P AG +T L+PPP G C ++ GSW
Sbjct: 297 GNHASCLSTPS------SGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQ 350
Query: 82 ATTSRP 87
T +P
Sbjct: 351 GATPQP 356
>gi|13899327 nuclear receptor interacting protein 2 [Homo sapiens]
Length = 281
Score = 32.7 bits (73), Expect = 0.29
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 14 WSPRCSTGRAELGKGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHG--- 70
W CSTG+ + G+ T P + P PTP AG ++K G
Sbjct: 16 WKESCSTGQRQAGRSREDSVTPPP----------SSPWPTPPAGAMSTKQEARRDEGEAR 65
Query: 71 --CQEADRGGSWGATTSRPFRQNLSDLGRHS--VLPLKRNLCPGGSSLGAPPLRTPQRRV 126
QEA + R +Q L + S +LPL +L G+S P QRR+
Sbjct: 66 TRGQEAQLRDRAHLSQQRRLKQATQFLHKDSADLLPLD-SLKRLGTSKDLQPRSVIQRRL 124
Query: 127 TLAAQRWL 134
WL
Sbjct: 125 VEGNPNWL 132
>gi|28557729 hypothetical protein LOC283687 [Homo sapiens]
Length = 130
Score = 32.7 bits (73), Expect = 0.29
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 45 SSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWGATTSRPFRQNLSDLGRHSVLPLK 104
+SL PP PT D ++ P A+ G W RP R L D+ RH +P +
Sbjct: 64 ASLEPPTPT-DLPSARARPRVP-------AESGPGWLHKARRPTRGILRDVLRHRGVPAQ 115
Query: 105 RNLCPGGSSLGAP 117
PG L +P
Sbjct: 116 PRPAPGAHQLSSP 128
>gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens]
Length = 2458
Score = 32.3 bits (72), Expect = 0.38
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 27 KGEPSPCTGRPEQRGRRKSSLAPPAPTPDAGPQTSKDLEPPPHGCQEADRGGSWG--ATT 84
+ EP+ G P+ GRR++SL P P P +S D P P +A+ G+ G AT
Sbjct: 73 QAEPASHKG-PKDAGRRRNSLPPSHQKPPRNPLSSSDAAPSPE--LQANGTGTQGLEATD 129
Query: 85 SRPFRQNLSDLGRHSVLPLKRN 106
+ + G+ + P K +
Sbjct: 130 TNGLSSSARPQGQQAGSPSKED 151
>gi|28372567 zinc finger protein 575 [Homo sapiens]
Length = 245
Score = 32.3 bits (72), Expect = 0.38
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 26 GKGEPSPCTGR-------PEQRGRRKSSLAPPAPTPDAGPQTSKDLEPP---PHGCQEAD 75
G +PSP TG+ P Q +K S + P PT AG PP PH C + D
Sbjct: 11 GATDPSP-TGKEPVTKEAPHQGPPQKPSQSAPGPTASAGSPPRPRRRPPPQRPHRCPDCD 69
Query: 76 RGGSW 80
+ S+
Sbjct: 70 KAFSY 74
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,055,324
Number of Sequences: 37866
Number of extensions: 693842
Number of successful extensions: 4638
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 4316
Number of HSP's gapped (non-prelim): 490
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.