Guide to the Human Genome
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Search of human proteins with 239757786

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757786 PREDICTED: hypothetical protein [Homo sapiens]
         (82 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757786 PREDICTED: hypothetical protein [Homo sapiens]           172   4e-44
gi|32479521 dishevelled 1 [Homo sapiens]                               33   0.049
gi|239745779 PREDICTED: hypothetical protein XP_002343588 [Homo ...    33   0.049
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]                32   0.083
gi|145275213 coagulation factor XII precursor [Homo sapiens]           32   0.11 
gi|150010546 G antigen 10 [Homo sapiens]                               32   0.11 
gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]          31   0.24 
gi|217330589 transforming growth factor, beta receptor associate...    30   0.41 
gi|21359865 transforming growth factor, beta receptor associated...    30   0.41 
gi|11415052 retinoid X receptor, beta [Homo sapiens]                   29   0.71 
gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens]                29   0.71 
gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens]                29   0.71 
gi|50726960 phosphatidylinositol (4,5) bisphosphate 5-phosphatas...    29   0.71 
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   0.92 
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   0.92 
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   0.92 
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s...    29   0.92 
gi|21687252 zinc finger protein 296 [Homo sapiens]                     29   0.92 
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s...    29   0.92 
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          28   1.2  
gi|20149646 hypothetical protein LOC54964 [Homo sapiens]               28   1.2  
gi|118344450 cell death inducing protein [Homo sapiens]                28   1.6  
gi|126723390 ankyrin repeat domain 24 [Homo sapiens]                   28   1.6  
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            28   2.1  
gi|23510333 pygopus homolog 2 [Homo sapiens]                           28   2.1  
gi|239752937 PREDICTED: hypothetical protein [Homo sapiens]            27   2.7  
gi|239747481 PREDICTED: hypothetical protein XP_002347535 [Homo ...    27   2.7  
gi|239741353 PREDICTED: hypothetical protein XP_002342204 [Homo ...    27   2.7  
gi|24497506 forkhead box A3 [Homo sapiens]                             27   2.7  
gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun...    27   3.5  

>gi|239757786 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 82

 Score =  172 bits (437), Expect = 4e-44
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60
          MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP
Sbjct: 1  MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60

Query: 61 SKNASLGEGPYLTPSFWPPPLP 82
          SKNASLGEGPYLTPSFWPPPLP
Sbjct: 61 SKNASLGEGPYLTPSFWPPPLP 82


>gi|32479521 dishevelled 1 [Homo sapiens]
          Length = 670

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 12  SPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPY 71
           S  SG   + ++ PG    RR  GAG  S S   H      GSS R  P+   S G  P 
Sbjct: 548 SKSSGSTRSSRRAPGREKERRAAGAG-GSGSESDHTAPSGVGSSWRERPAGQLSRGSSPR 606

Query: 72  LTPSFWPPPLP 82
              S   P LP
Sbjct: 607 SQASATAPGLP 617


>gi|239745779 PREDICTED: hypothetical protein XP_002343588 [Homo
           sapiens]
          Length = 201

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 13  PESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSK-RIPPSKNASLGEGPY 71
           P  G A +G +    + SR GR  GS  NS   HG+ +SK     RIP    ASL     
Sbjct: 140 PGPGSAPSGWETWADLGSRAGRSQGSGLNSSTAHGRAESKTQGHVRIPRPVTASLTPDVT 199

Query: 72  LT 73
           LT
Sbjct: 200 LT 201


>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
          Length = 2765

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%)

Query: 11  LSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVIT----HGKRKSKGSSKR-IPPSKNAS 65
           +SPE  +   G+     I SRR  G  S  NS +T      + KS   + R IPP+ + S
Sbjct: 123 MSPEHAIRLWGRG----IKSRRSSGLSSRENSALTLTDSDNENKSDDENGRPIPPTSSPS 178

Query: 66  LGEGPYLTPSFWPPPL 81
           L     L  S  PPP+
Sbjct: 179 LLPSAQLPSSHNPPPV 194


>gi|145275213 coagulation factor XII precursor [Homo sapiens]
          Length = 615

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 1   MHVPWLQSEPLSPESGVAAAG---KQEPGFIISRRGRGAGSSSNSVITHGKR--KSKGSS 55
           +HVP + ++P  P+           Q PG + ++R +    + N  ++ G+R  KS  S 
Sbjct: 311 LHVPLMPAQPAPPKPQPTTRTPPQSQTPGALPAKREQPPSLTRNGPLSCGQRLRKSLSSM 370

Query: 56  KRIPPSKNASLGEGPYLTPSFW 77
            R+     A  G  PY+   +W
Sbjct: 371 TRVVGGLVALRGAHPYIAALYW 392


>gi|150010546 G antigen 10 [Homo sapiens]
          Length = 116

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 9  EPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGE 68
          EP +PE G  A  +Q+P    ++ G   G+S+      G +    S +++ P      G+
Sbjct: 36 EPATPEEGEPATQRQDPA--AAQEGEDEGASAG----QGPKPEADSQEQVHPKTGCECGD 89

Query: 69 GP 70
          GP
Sbjct: 90 GP 91


>gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]
          Length = 501

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 21/86 (24%)

Query: 10  PLSPESGVAAAGKQEPGFIISRRGRGAG-------SSSNSVITHGKRKSKGSSKR----- 57
           P +PE      G QE  +   RRGRG         S     +    R+ +G S R     
Sbjct: 94  PANPEGARRVVGGQERVWPAVRRGRGGSMFRLLSWSLGRGFLRAAGRRCRGCSARLLPGL 153

Query: 58  ---------IPPSKNASLGEGPYLTP 74
                    +PPS+ A  G GP L P
Sbjct: 154 AGGPGPEVQVPPSRVAPHGRGPGLLP 179


>gi|217330589 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 35  GAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPYLTPSF 76
           G   S N + T+ K K KGSS ++   K   + + P+  P F
Sbjct: 789 GLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVF 830


>gi|21359865 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 35  GAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPYLTPSF 76
           G   S N + T+ K K KGSS ++   K   + + P+  P F
Sbjct: 789 GLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVF 830


>gi|11415052 retinoid X receptor, beta [Homo sapiens]
          Length = 533

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 15/91 (16%)

Query: 4   PWLQSEPLSPESGVAAAGKQ-----EPGFI-------ISRRGRGAGSSSNSVITHGKRKS 51
           PWL  +P +  +   A G+Q     EPG           R  R   SSS + +  G    
Sbjct: 41  PWL--DPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPP 98

Query: 52  KGSSKRIPPSKNASL-GEGPYLTPSFWPPPL 81
                 +PPS   SL G G    P   PPPL
Sbjct: 99  SPPGPPLPPSTAPSLGGSGAPPPPPMPPPPL 129


>gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens]
          Length = 490

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 59  PPSKNASLGEGPYLTPSFWPPPLP 82
           PP    S  + P+  P+ WPPP+P
Sbjct: 81  PPDFPVSCQDEPFRDPAVWPPPVP 104


>gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens]
          Length = 490

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 59  PPSKNASLGEGPYLTPSFWPPPLP 82
           PP    S  + P+  P+ WPPP+P
Sbjct: 81  PPDFPVSCQDEPFRDPAVWPPPVP 104


>gi|50726960 phosphatidylinositol (4,5) bisphosphate
          5-phosphatase, A [Homo sapiens]
          Length = 638

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 16 GVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEG-PYLTP 74
          G ++ G + PG   +R G G+      V   G      SS ++P  KNA+LG   P +T 
Sbjct: 3  GQSSRGSRRPG---TRAGLGSLPMPQGVAQTGAPSKVDSSFQLPAKKNAALGPSEPRITV 59

Query: 75 SFW 77
            W
Sbjct: 60 VTW 62


>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2790

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 10   PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63
            P +P S   A  +Q PG   SR+G   G     + T  K    G          +P S  
Sbjct: 1244 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1299

Query: 64   ASLG--EGPYLTPSFWPPPLP 82
              L   EGP LTP   P PLP
Sbjct: 1300 FLLSPLEGPNLTPEASPDPLP 1320


>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 10   PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63
            P +P S   A  +Q PG   SR+G   G     + T  K    G          +P S  
Sbjct: 1160 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1215

Query: 64   ASLG--EGPYLTPSFWPPPLP 82
              L   EGP LTP   P PLP
Sbjct: 1216 FLLSPLEGPNLTPEASPDPLP 1236


>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 10   PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63
            P +P S   A  +Q PG   SR+G   G     + T  K    G          +P S  
Sbjct: 1160 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1215

Query: 64   ASLG--EGPYLTPSFWPPPLP 82
              L   EGP LTP   P PLP
Sbjct: 1216 FLLSPLEGPNLTPEASPDPLP 1236


>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
           sapiens]
          Length = 1074

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 17/78 (21%)

Query: 1   MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60
           +H P  Q+EPLSPE+             ++ R R A      +  H + ++ G+    PP
Sbjct: 221 VHTPSPQAEPLSPETAQTE---------VAPRTRPA-----PLRHHPRAQASGTE---PP 263

Query: 61  SKNASLGEGPYLTPSFWP 78
           S   SLGEG +   S  P
Sbjct: 264 SPTHSLGEGGFFRASPQP 281


>gi|21687252 zinc finger protein 296 [Homo sapiens]
          Length = 475

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 18  AAAGKQEPGFIISRRGRGAGSSSNSVITHGKR-----KSKGSSKRIPPSKNASLGEG 69
           A AG QEPG   S    G G  +   IT  +R       K S K++P S   S G G
Sbjct: 329 ATAGVQEPGAPGSGAQAGPGGDTWGAITTEQRTDPANSQKASPKKMPKSGGKSRGPG 385


>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
           sapiens]
          Length = 877

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 17/78 (21%)

Query: 1   MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60
           +H P  Q+EPLSPE+             ++ R R A      +  H + ++ G+    PP
Sbjct: 221 VHTPSPQAEPLSPETAQTE---------VAPRTRPA-----PLRHHPRAQASGTE---PP 263

Query: 61  SKNASLGEGPYLTPSFWP 78
           S   SLGEG +   S  P
Sbjct: 264 SPTHSLGEGGFFRASPQP 281


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 8/56 (14%)

Query: 12   SPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSK-RIPPSKNASL 66
            SP SG+ +A    P       G  A SSS  V   G   S  SSK   PPSK   L
Sbjct: 1272 SPPSGITSASNTTP-------GEPAASSSRPVAPSGTALSTTSSKLETPPSKLGEL 1320


>gi|20149646 hypothetical protein LOC54964 [Homo sapiens]
          Length = 341

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 14/91 (15%)

Query: 6   LQSEPLSPESGVAA-AGKQEPGFII-SRRGRGAGSSSNSVITHGKR----------KSKG 53
           +  E  S E GV   AGK      + S     AGSSS   I + +           +S G
Sbjct: 100 INEEDGSSEEGVVINAGKDSTSRELPSATPNTAGSSSTRFIANSQEPEIRLTSSLPRSPG 159

Query: 54  SSKRIPPSKNASLGEG--PYLTPSFWPPPLP 82
            S    P   A+L +   P  TPS WP P P
Sbjct: 160 RSTEDLPGSQATLSQWSTPGSTPSRWPSPSP 190


>gi|118344450 cell death inducing protein [Homo sapiens]
          Length = 208

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)

Query: 58 IPPSKNASLGEGPYLTPSFWPPPLP 82
          IPP  +A   +G Y+ P F+PPP P
Sbjct: 67 IPPHMSA---DGTYMPPGFYPPPGP 88


>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
          Length = 1146

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 19  AAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60
           AA +  P   ++    G  SS NS+ +HGK+ +    K  PP
Sbjct: 269 AAQRPSPPSALTEDDSGEASSQNSMSSHGKQGAPKKRKAPPP 310


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 15  SGVAAAGKQEPGFIISRRGRGAGSSSNS---VITHGKRKSKGSSKRIPPSKNASLGEG 69
           SG  AA  +  G   ++R RG G+ S S    +T G +K+  +  + PP   +  G G
Sbjct: 749 SGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRG 806


>gi|23510333 pygopus homolog 2 [Homo sapiens]
          Length = 406

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 10  PLSPESG--VAAAGKQEPGFIISRRGRGAGS-SSNSVITHGKRKSKGSSKRIPP 60
           P  P SG   AA    +P F  +  GRG G+  +NS+   GK    GS  + PP
Sbjct: 272 PQEPHSGSPAAAVNGNQPSFPPNSSGRGGGTPDANSLAPPGK-AGGGSGPQPPP 324


>gi|239752937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 101

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67
          GV+ AG+    P    SR+GRGA      ++  G R+  GS  R+ P +   LG
Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74


>gi|239747481 PREDICTED: hypothetical protein XP_002347535 [Homo
          sapiens]
          Length = 101

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67
          GV+ AG+    P    SR+GRGA      ++  G R+  GS  R+ P +   LG
Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74


>gi|239741353 PREDICTED: hypothetical protein XP_002342204 [Homo
          sapiens]
          Length = 101

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67
          GV+ AG+    P    SR+GRGA      ++  G R+  GS  R+ P +   LG
Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 6   LQSEPLSPESGVAAAGKQEPGFIISRRGRGAG-SSSNSVITHGKRKSKGSSKRIPPSK 62
           L S PL+P +  A  G   PG  +S     +G  +    + HGK   KG  + +  +K
Sbjct: 60  LPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAK 117


>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
           3G [Homo sapiens]
          Length = 358

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 6   LQSEPLSPESGVAAAGKQEPGFIISRRGRGA 36
           LQ EPL P+   A +G  EPG   +++  GA
Sbjct: 267 LQPEPLEPQQPEAPSGASEPGSGDAKKEPGA 297


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.130    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,308,978
Number of Sequences: 37866
Number of extensions: 193137
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 80
length of query: 82
length of database: 18,247,518
effective HSP length: 54
effective length of query: 28
effective length of database: 16,202,754
effective search space: 453677112
effective search space used: 453677112
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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