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Search of human proteins with 239757439
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757439 PREDICTED: hypothetical protein [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757439 PREDICTED: hypothetical protein [Homo sapiens] 508 e-144
gi|239751956 PREDICTED: hypothetical protein [Homo sapiens] 508 e-144
gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo ... 508 e-144
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-05
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-05
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-05
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 38 0.007
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 38 0.007
gi|112421108 capicua homolog [Homo sapiens] 38 0.009
gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo ... 37 0.012
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 37 0.016
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 37 0.016
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 37 0.020
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 37 0.020
gi|194272180 plexin B1 [Homo sapiens] 37 0.020
gi|40254442 plexin B1 [Homo sapiens] 37 0.020
gi|208431810 hypothetical protein LOC51307 [Homo sapiens] 37 0.020
gi|7706139 hypothetical protein LOC51307 [Homo sapiens] 37 0.020
gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens] 37 0.020
gi|238859651 pleckstrin homology domain containing family A memb... 36 0.027
gi|169209171 PREDICTED: hypothetical protein [Homo sapiens] 36 0.027
gi|169204821 PREDICTED: hypothetical protein [Homo sapiens] 36 0.027
gi|169205432 PREDICTED: hypothetical protein [Homo sapiens] 36 0.027
gi|169204105 PREDICTED: hypothetical protein [Homo sapiens] 36 0.027
gi|150417989 cyclin K isoform 1 [Homo sapiens] 36 0.027
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 36 0.035
gi|145309320 forkhead box Q1 [Homo sapiens] 35 0.045
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 35 0.045
gi|24497589 aristaless related homeobox [Homo sapiens] 35 0.045
gi|4504713 insulinoma-associated 1 [Homo sapiens] 35 0.045
>gi|239757439 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 508 bits (1308), Expect = e-144
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET
Sbjct: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
Query: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR
Sbjct: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
Query: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG
Sbjct: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
Query: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI
Sbjct: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
Query: 241 PLG 243
PLG
Sbjct: 241 PLG 243
>gi|239751956 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 508 bits (1308), Expect = e-144
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET
Sbjct: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
Query: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR
Sbjct: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
Query: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG
Sbjct: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
Query: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI
Sbjct: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
Query: 241 PLG 243
PLG
Sbjct: 241 PLG 243
>gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo
sapiens]
Length = 243
Score = 508 bits (1308), Expect = e-144
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET
Sbjct: 1 MGGCTGVGATATAGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPET 60
Query: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR
Sbjct: 61 REGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACAR 120
Query: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG
Sbjct: 121 VESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGG 180
Query: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI
Sbjct: 181 GHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLTRIRLCLGGKQKVRVPATPGLRLWI 240
Query: 241 PLG 243
PLG
Sbjct: 241 PLG 243
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 46.2 bits (108), Expect = 3e-05
Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98
N PG LL F P G E R R R R GRE P++P R RA D
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267
Query: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156
A+L+ P G AA A E+ + + S PH
Sbjct: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317
Query: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211
GPHP+ G+ R GG W +RR S RG + A PT RR+
Sbjct: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365
Query: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237
++ R R G + R A PG R
Sbjct: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 46.2 bits (108), Expect = 3e-05
Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98
N PG LL F P G E R R R R GRE P++P R RA D
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267
Query: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156
A+L+ P G AA A E+ + + S PH
Sbjct: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317
Query: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211
GPHP+ G+ R GG W +RR S RG + A PT RR+
Sbjct: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365
Query: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237
++ R R G + R A PG R
Sbjct: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 46.2 bits (108), Expect = 3e-05
Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98
N PG LL F P G E R R R R GRE P++P R RA D
Sbjct: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267
Query: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156
A+L+ P G AA A E+ + + S PH
Sbjct: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317
Query: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211
GPHP+ G+ R GG W +RR S RG + A PT RR+
Sbjct: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365
Query: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237
++ R R G + R A PG R
Sbjct: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 38.1 bits (87), Expect = 0.007
Identities = 54/179 (30%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 68 RSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFL 127
R R R R + +EEP + PP RP A A P+A G AR
Sbjct: 382 RQRPRRLPRASLQEEPKRRPPCARPSGAGPAR----EGPAAWPGGAPTPPHARPTGRRQD 437
Query: 128 PQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERR 187
P+ AP G A+S G H +GRGW GGG A RR
Sbjct: 438 PEPGPRAPRGGPASS----------------GWH-----AGSAAGRGW-DPGGGSRARRR 475
Query: 188 VSTSANGRGEELRGA--PPTLGPRRSQQSLTRIRLCLG-----GKQKVRVPATPGLRLW 239
+A GRG LR A P P S +S+ +R G ++VRV G + W
Sbjct: 476 ---AARGRG-CLRSARSSPHARPLGSSRSVRLLRSAAGRGPSLDSREVRVLIERGCQWW 530
Score = 33.9 bits (76), Expect = 0.13
Identities = 45/140 (32%), Positives = 55/140 (39%), Gaps = 27/140 (19%)
Query: 74 SRRGAGREEPAKPP--PRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSW 131
+RRG +E+ P PR A A L P A R+G AAC R +
Sbjct: 197 ARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAACGR--------RGR 248
Query: 132 RTAPSAGIA--ASCLPHPGQPFI--EPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERR 187
AP +G+ AS L P + P P A LP +G SGR P GG
Sbjct: 249 IAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGR--PRGRGG------ 300
Query: 188 VSTSANGRGEELRGAPPTLG 207
+A GRG RG P G
Sbjct: 301 ---AAAGRGS--RGEHPACG 315
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 38.1 bits (87), Expect = 0.007
Identities = 54/179 (30%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 68 RSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFL 127
R R R R + +EEP + PP RP A A P+A G AR
Sbjct: 382 RQRPRRLPRASLQEEPKRRPPCARPSGAGPAR----EGPAAWPGGAPTPPHARPTGRRQD 437
Query: 128 PQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERR 187
P+ AP G A+S G H +GRGW GGG A RR
Sbjct: 438 PEPGPRAPRGGPASS----------------GWH-----AGSAAGRGW-DPGGGSRARRR 475
Query: 188 VSTSANGRGEELRGA--PPTLGPRRSQQSLTRIRLCLG-----GKQKVRVPATPGLRLW 239
+A GRG LR A P P S +S+ +R G ++VRV G + W
Sbjct: 476 ---AARGRG-CLRSARSSPHARPLGSSRSVRLLRSAAGKGPSLDSREVRVLIERGCQWW 530
Score = 33.9 bits (76), Expect = 0.13
Identities = 45/140 (32%), Positives = 55/140 (39%), Gaps = 27/140 (19%)
Query: 74 SRRGAGREEPAKPP--PRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSW 131
+RRG +E+ P PR A A L P A R+G AAC R +
Sbjct: 197 ARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAACGR--------RGR 248
Query: 132 RTAPSAGIA--ASCLPHPGQPFI--EPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERR 187
AP +G+ AS L P + P P A LP +G SGR P GG
Sbjct: 249 IAAPLSGVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGR--PRGRGG------ 300
Query: 188 VSTSANGRGEELRGAPPTLG 207
+A GRG RG P G
Sbjct: 301 ---AAAGRGS--RGEHPACG 315
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 37.7 bits (86), Expect = 0.009
Identities = 39/150 (26%), Positives = 51/150 (34%), Gaps = 14/150 (9%)
Query: 58 PETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAA 117
P R+ G R + +P P P P A +PP P S
Sbjct: 1202 PAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAKG 1261
Query: 118 CARVES-WHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWP 176
+ S + WR P G L + G EPP P P PA G S
Sbjct: 1262 PETMASKFPSSSSDWRV-PGQG-----LENRG----EPPTPPSPAPAPAVAPGGSSESSS 1311
Query: 177 SRGGGHWAERRVSTSANGRGEELRGAPPTL 206
R G ER+ A G G++++ PP L
Sbjct: 1312 GRAAGDTPERK---EAAGTGKKVKVRPPPL 1338
>gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo
sapiens]
Length = 209
Score = 37.4 bits (85), Expect = 0.012
Identities = 52/190 (27%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 13 AGARTESRHQEDANGRNNHESSKDHNPQGLSVVNIHPGLLSFHLQPETREGKREGRSRRL 72
AG ++R + GR + + P G P L+ P G GR RR+
Sbjct: 28 AGGEVQTRPPPPSPGRGSELGASAQRPPG-------PAFLA---APAFGAGLAVGRLRRV 77
Query: 73 RSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRS--LAACARVES---WHFL 127
RRG + +P + PP + P L+ P P S R L C R W
Sbjct: 78 -GRRGPEKRQPGRKPPID-PLGGPALPRLSSPEPPPAGSDRDWRLRLCLREGEGVLWRRF 135
Query: 128 P------QSW--RTAPSAGIAASCLPHPGQPFIEPPLPIG-PHPATLPVAGQSGRGWPSR 178
P SW R + A CL P P PP P G P+P L S P+R
Sbjct: 136 PLTPPPSGSWACRVSAMGEGCARCLRLP--PRRGPPRPPGLPYPGGLAAPRASPPQHPNR 193
Query: 179 GGGHWAERRV 188
+ RR+
Sbjct: 194 AAPPASARRL 203
Score = 30.8 bits (68), Expect = 1.1
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 17/156 (10%)
Query: 68 RSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPS-----AVRSGRSLAACARV- 121
R R RR G + PPP + + A+ PP P+ A +G ++ RV
Sbjct: 19 RLSRALQRRAGGEVQTRPPPPSPGRGSELGASAQRPPGPAFLAAPAFGAGLAVGRLRRVG 78
Query: 122 ESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRG--W---- 175
Q R P + LP P EPP L + + G G W
Sbjct: 79 RRGPEKRQPGRKPPIDPLGGPALPRLSSP--EPPPAGSDRDWRLRLCLREGEGVLWRRFP 136
Query: 176 -PSRGGGHWAERRVSTSANGRGEELRGAPPTLGPRR 210
G WA RVS G LR PP GP R
Sbjct: 137 LTPPPSGSWA-CRVSAMGEGCARCLR-LPPRRGPPR 170
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 37.0 bits (84), Expect = 0.016
Identities = 55/201 (27%), Positives = 66/201 (32%), Gaps = 31/201 (15%)
Query: 67 GRSRRLRSRRGAGREEPAKP-----PPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARV 121
G+ R S R G PA P PP PR A A PA AV S + A AR
Sbjct: 16 GQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPAR- 74
Query: 122 ESWHFLPQSWRTAPSAGIAASCLPH-PGQPFIEPPLPIGP---------HPATLPVAGQS 171
P P+ G QP + PPL P P P S
Sbjct: 75 ------PALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPS 128
Query: 172 GRGWPSRGGGH--WAERRVSTSANGRGEELRGAPPTL-----GPRRSQQSLTRIRLCLGG 224
R P+ GG W + A G R +PP G RS+Q L + L +
Sbjct: 129 RRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISC 188
Query: 225 --KQKVRVPATPGLRLWIPLG 243
K G + W P G
Sbjct: 189 TLSHKPASLRRSGTQAWGPRG 209
>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.016
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 52 LSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVR- 110
+ F LQ + G G + + +R GAG EPA P P RP+A + PSA R
Sbjct: 1 MQFSLQASLQLGHNSGVAMQRAAREGAGAWEPAPPSPVLRPQAHPQRSR---EGPSAARP 57
Query: 111 --------SGRSLAACARVESWHFLPQSWRTAPSAGIAA--SCL-PHPGQ 149
GR C L AG+AA SCL P PG+
Sbjct: 58 GGASGLHEEGRVRCGCRPDARASPLAAPAAAMSGAGLAAVVSCLRPQPGE 107
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 36.6 bits (83), Expect = 0.020
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 86 PPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESW-----HFLPQSWRTAPSAGIA 140
P PR PRAA + P AP + + + +C R+E W P+ R P G
Sbjct: 294 PLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGR 353
Query: 141 ASCLPHPGQP---------FIEPPLPIGPHPATLP 166
+ P P + PP PHPA+ P
Sbjct: 354 PAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPP 388
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 36.6 bits (83), Expect = 0.020
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 86 PPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESW-----HFLPQSWRTAPSAGIA 140
P PR PRAA + P AP + + + +C R+E W P+ R P G
Sbjct: 390 PLPRRPPRAARSYSCSAPEAPPPLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGR 449
Query: 141 ASCLPHPGQP---------FIEPPLPIGPHPATLP 166
+ P P + PP PHPA+ P
Sbjct: 450 PAAAPPTRAPTRRFSDSSGSLTPPGHRPPHPASPP 484
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 36.6 bits (83), Expect = 0.020
Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 43/149 (28%)
Query: 81 EEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPSAGIA 140
EEP+ P P+N P AV PAP+ R + P+ +P +
Sbjct: 757 EEPSPPSPQNGPGTAV-------PAPTDFRPSAT-------------PEDLLASPLSPSE 796
Query: 141 ASCLP--HPGQPFIEPPLPIGPHPATLPVAGQSGR--------GWPSRGGGHWAER---- 186
+ +P PG + P +P+ PAT+P G W +R GG E
Sbjct: 797 VAAVPPADPGPEALHPTVPLDLPPATVPATTFPGAMGSVKPALDWLTREGGELPEADEWT 856
Query: 187 -------RVSTSANGRGE--ELRGAPPTL 206
ST +G G+ EL G P L
Sbjct: 857 GGDAPAFSTSTLLSGDGDSAELEGPPAPL 885
>gi|40254442 plexin B1 [Homo sapiens]
Length = 2135
Score = 36.6 bits (83), Expect = 0.020
Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 43/149 (28%)
Query: 81 EEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPSAGIA 140
EEP+ P P+N P AV PAP+ R + P+ +P +
Sbjct: 757 EEPSPPSPQNGPGTAV-------PAPTDFRPSAT-------------PEDLLASPLSPSE 796
Query: 141 ASCLP--HPGQPFIEPPLPIGPHPATLPVAGQSGR--------GWPSRGGGHWAER---- 186
+ +P PG + P +P+ PAT+P G W +R GG E
Sbjct: 797 VAAVPPADPGPEALHPTVPLDLPPATVPATTFPGAMGSVKPALDWLTREGGELPEADEWT 856
Query: 187 -------RVSTSANGRGE--ELRGAPPTL 206
ST +G G+ EL G P L
Sbjct: 857 GGDAPAFSTSTLLSGDGDSAELEGPPAPL 885
>gi|208431810 hypothetical protein LOC51307 [Homo sapiens]
Length = 392
Score = 36.6 bits (83), Expect = 0.020
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 19/89 (21%)
Query: 48 HPGLLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPS 107
HP LS HL+P +R G S + + R EP P P P PPAP
Sbjct: 70 HPSGLSLHLRPPSR-----GNSPKEQPFSQVLRPEP--PDPEKLP---------VPPAPP 113
Query: 108 AVRSGRSLAACARVESWHFLPQSWRTAPS 136
+ R RSL+ + W WR APS
Sbjct: 114 SKRHCRSLSVPVDLSRWQ---PVWRPAPS 139
>gi|7706139 hypothetical protein LOC51307 [Homo sapiens]
Length = 392
Score = 36.6 bits (83), Expect = 0.020
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 19/89 (21%)
Query: 48 HPGLLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPS 107
HP LS HL+P +R G S + + R EP P P P PPAP
Sbjct: 70 HPSGLSLHLRPPSR-----GNSPKEQPFSQVLRPEP--PDPEKLP---------VPPAPP 113
Query: 108 AVRSGRSLAACARVESWHFLPQSWRTAPS 136
+ R RSL+ + W WR APS
Sbjct: 114 SKRHCRSLSVPVDLSRWQ---PVWRPAPS 139
>gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]
Length = 782
Score = 36.6 bits (83), Expect = 0.020
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 82 EPAKPPPRNRPRAAVDAATLTPPA-----PSAVRSGRSLAACARVESWHFLPQSWRTAPS 136
EP+ PR +DA+ PP P+ V+ L E F+P++ T
Sbjct: 559 EPSATAPRGVVYKIIDASRRAPPGKCQIQPAQVKIRSRLIPFVPKEK--FIPKTRSTPRP 616
Query: 137 AGIAASCLPHPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRG 196
A + P G+P PP P P PA P R RGGG R S S R
Sbjct: 617 TARAPTRAPRRGRPTAAPPAPT-PRPAR-PTQQPGSR----RGGGRRRGRLNSASRAFRD 670
Query: 197 EELRGAPPTLGPRRSQQSLTRIRLCLGGK 225
E+R + P R+ + +GG+
Sbjct: 671 GEVR----LVRPAGLSSGSGRVEVFVGGR 695
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 36.2 bits (82), Expect = 0.027
Identities = 50/176 (28%), Positives = 61/176 (34%), Gaps = 33/176 (18%)
Query: 58 PETREGKREGRSRR----LRSRRGAGREEPAKPPPRN--------RPRAAVDAATLTPPA 105
PE G+ EGR R RG GR P P R + D T
Sbjct: 181 PEVSRGE-EGRISESPEVTRLSRGRGRPRLLTPSPTTDLHSGLQMRRARSPDLFTPLSRP 239
Query: 106 PSAVRSGRSLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIE--PPLPIGPHPA 163
PS + R +A AR APS A PH I+ PPL GP
Sbjct: 240 PSPLSLPRPRSAPARRPP----------APSGDTAPPARPHTPLSRIDVRPPLDWGPQRQ 289
Query: 164 TLPVAGQSGRGWPSRGGG--------HWAERRVSTSANGRGEELRGAPPTLGPRRS 211
TL RG PS GG HW++ + + +G L+ P G R S
Sbjct: 290 TLSRPPTPRRGPPSEAGGGKPPRSPQHWSQEPRTQAHSGSPTYLQLPPRPPGTRAS 345
>gi|169209171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 169
Score = 36.2 bits (82), Expect = 0.027
Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 18/132 (13%)
Query: 93 RAAVDAATLTPPAPSAVRSGRSLAA-----CARVESWHFLPQSWRTAPSAGIAASCLPHP 147
R V A P S R L CAR W + W + ++ + A P P
Sbjct: 28 RTTVSGAPRPPVRSDLAPSDRLLPVPGRRRCARAGLWKIV---WVNSQASRLNARLPPPP 84
Query: 148 GQPFIEPPLPIGP--HPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGEELRGAPPT 205
P + PPL P HP + P G P R A S + GR E G P
Sbjct: 85 LHPLLPPPLAFNPTRHPHSAPQPG------PERAPRVLARAEGSPGSKGRSPE--GTPSL 136
Query: 206 LGPRRSQQSLTR 217
L P +++ R
Sbjct: 137 LCPGGQKRTAGR 148
>gi|169204821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 36.2 bits (82), Expect = 0.027
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 74 SRRGAGREE--PAKP-----PPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWH- 125
+RRGAG + PA+P PP PR +V AA + S A A + H
Sbjct: 15 ARRGAGMQVTGPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHP 74
Query: 126 FLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLP 166
LPQ AG + P +P PP P+ P P+ LP
Sbjct: 75 SLPQG------AGALPAGRRRPDRPRPAPPWPLSPRPSHLP 109
>gi|169205432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 36.2 bits (82), Expect = 0.027
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 74 SRRGAGREE--PAKP-----PPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWH- 125
+RRGAG + PA+P PP PR +V AA + S A A + H
Sbjct: 15 ARRGAGMQVTGPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHP 74
Query: 126 FLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLP 166
LPQ AG + P +P PP P+ P P+ LP
Sbjct: 75 SLPQG------AGALPAGRRRPDRPRPAPPWPLSPRPSHLP 109
>gi|169204105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 36.2 bits (82), Expect = 0.027
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 74 SRRGAGREE--PAKP-----PPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWH- 125
+RRGAG + PA+P PP PR +V AA + S A A + H
Sbjct: 15 ARRGAGMQVTGPARPFHRLRPPDTHPRGSVHAAGVLDGLASGRPGLLGAPAPAPALTQHP 74
Query: 126 FLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIGPHPATLP 166
LPQ AG + P +P PP P+ P P+ LP
Sbjct: 75 SLPQG------AGALPAGRRRPDRPRPAPPWPLSPRPSHLP 109
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 36.2 bits (82), Expect = 0.027
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 10/98 (10%)
Query: 83 PAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPSAGIAAS 142
P PPP + P A+ T P P + R+ H +P P G+ +
Sbjct: 486 PVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPP--HPPPGLGLPPA 543
Query: 143 CLPHP-----GQPFIEPPLPIGPHPATLPVAGQSGRGW 175
P P GQP + PP+ P P PV G W
Sbjct: 544 SYPPPAVPPGGQPPVPPPI---PPPGMPPVGGLGRAAW 578
Score = 29.3 bits (64), Expect = 3.2
Identities = 32/133 (24%), Positives = 41/133 (30%), Gaps = 21/133 (15%)
Query: 84 AKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPSAGIAASC 143
A+PPP P+ L P P R AA E P + A+
Sbjct: 348 AEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAE------------PPGPVDATD 395
Query: 144 LP--------HPGQPFIEPPLPIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGR 195
LP HP PPLP P P P + +G S + + +
Sbjct: 396 LPKVQIPPPAHPAPVHQPPPLPHRPPPPP-PSSYMTGMSTTSSYMSGEGYQSLQSMMKTE 454
Query: 196 GEELRGAPPTLGP 208
G PP GP
Sbjct: 455 GPSYGALPPAYGP 467
Score = 27.7 bits (60), Expect = 9.4
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 83 PAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARV-ESWHFLPQSWRTA------- 134
PA P P ++P PP PS+ +G S + E + L +T
Sbjct: 404 PAHPAPVHQPPPLPHRPP--PPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGAL 461
Query: 135 -PSAGIAASCLPHPG-QPFIEPPLPIGPHPATLP 166
P+ G A HP P PP P+ P PA+ P
Sbjct: 462 PPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFP 495
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 35.8 bits (81), Expect = 0.035
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 80 REEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPSAG- 138
+++ +PPP P +++ ++T P + + S A + W + +P A
Sbjct: 501 QQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS-AGTGSIPPWQQQQAAAAASPGAPQ 559
Query: 139 IAASCLPHPGQPFIEPPLPIG-PHPATLPVAGQSGRGWPSRGG 180
+ + P P ++PPLP G P P P G +G P RGG
Sbjct: 560 MQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPRGG 602
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 35.4 bits (80), Expect = 0.045
Identities = 54/206 (26%), Positives = 67/206 (32%), Gaps = 44/206 (21%)
Query: 56 LQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSL 115
L P + +G RR R R PA P RP A PPAP+A S R
Sbjct: 196 LNPNSEYTFADGVFRRRRKRLSHRAPVPA---PGLRPEEAPGLPAAPPPAPAAPASPRMR 252
Query: 116 AACARVESW-------------HFLPQSWR------TAPSAGIAASCLPHPGQPFIEPPL 156
+ + E L + +R TAP + P P P L
Sbjct: 253 SPARQEERASPAGKFSSSFAIDSILRKPFRSRRLRDTAPGTTLQWGAAPCPPLPAFPALL 312
Query: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGEELRGAPPTLGPRRSQQSLT 216
P P A LP+ G G P+R G AE PPT P L
Sbjct: 313 PAAPCRALLPLCAY-GAGEPARLGAREAE----------------VPPTAPP-----LLL 350
Query: 217 RIRLCLGGKQKVRVPATPGLRLWIPL 242
+ +R PA G L+ PL
Sbjct: 351 APLPAAAPAKPLRGPAAGGAHLYCPL 376
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.045
Identities = 49/178 (27%), Positives = 61/178 (34%), Gaps = 56/178 (31%)
Query: 56 LQPETREGKREGRSRRLRSRRGAGREEPAKPPPRNRPRAAVDAATLTPPAPS-------- 107
L+P R G+R G S +S R A R P PP +A L P PS
Sbjct: 44 LEPRAR-GQRGG-SGGCQSTRAAERTRPPHPP---------NAVLLLQPEPSLTWAQGRG 92
Query: 108 -----------AVRSGRSLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156
A RSG CA + +S R P P P
Sbjct: 93 CRGHFRSLPAAASRSGSRTLRCASSD------RSLREQKQRRAGPDPTPSPAPP------ 140
Query: 157 PIGPHPA------TLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGEELRGAPPTLGP 208
P GP P+ + P A ++ RG GG S +G G+ GA PT GP
Sbjct: 141 PAGPRPSPGSLGPSAPAAPRTARGAYELQGG--------ASQDGPGQAAVGATPTTGP 190
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 35.4 bits (80), Expect = 0.045
Identities = 38/119 (31%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 77 GAGREEPAKPPPRNRPRAAVDAATLTPPAPSAVRSGRSLAACARVESWHFLPQSWRTAPS 136
G E P PPP RP D A + AA A +W L S AP
Sbjct: 120 GPRGEAPPPPPPTARPGERPDGA-----------GAAAAAAAAAAAAWDTLKIS--QAPQ 166
Query: 137 AGIAAS-CLPHPGQPFIEPPLPI----GPHPATLP-----VAGQSGRGWPSRGGGHWAE 185
I+ S G PF+ PP + GP T P VAG G P+ GGG E
Sbjct: 167 VSISRSKSYRENGAPFVPPPPALDELGGPGGVTHPEERLGVAGGPGSA-PAAGGGTGTE 224
>gi|4504713 insulinoma-associated 1 [Homo sapiens]
Length = 510
Score = 35.4 bits (80), Expect = 0.045
Identities = 45/172 (26%), Positives = 57/172 (33%), Gaps = 35/172 (20%)
Query: 61 REGKREGRSRRLRSRRGAGREEPAKP----------PPRNRPRAAVDAATLTPPAPSAVR 110
R G+ R+ L G R EP P PP R AA+ AA P P
Sbjct: 21 RGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAERAHAALAAALACAPGPQPPP 80
Query: 111 SGRSLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPLPIG--------PHP 162
G A E+ H P T P + H + E +G P P
Sbjct: 81 QGPRAAHFGNPEAAHPAPLYSPTRPVS------REHEKHKYFERSFNLGSPVSAESFPTP 134
Query: 163 ATLPVAGQSGRGWPSRGGGHW----------AERRVSTSANGRGEELRGAPP 204
A L + G G G GGG AE ++ T+ + E RG P
Sbjct: 135 AAL-LGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAARGPGP 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,006,373
Number of Sequences: 37866
Number of extensions: 801226
Number of successful extensions: 4484
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 380
Number of HSP's that attempted gapping in prelim test: 4106
Number of HSP's gapped (non-prelim): 721
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.