Search of human proteins with 239757298

Search of human proteins with 239757298

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757298 PREDICTED: hypothetical protein [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757298 PREDICTED: hypothetical protein [Homo sapiens]           377   e-105
gi|239751803 PREDICTED: hypothetical protein XP_002348005 [Homo ...   295   2e-80
gi|239746294 PREDICTED: hypothetical protein XP_002343725 [Homo ...   295   2e-80
gi|239749627 PREDICTED: hypothetical protein XP_002347107 [Homo ...    38   0.004
gi|239743902 PREDICTED: hypothetical protein XP_002342970 [Homo ...    38   0.004
gi|239755146 PREDICTED: hypothetical protein [Homo sapiens]            35   0.036
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                32   0.23 
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  30   0.89 
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]               30   1.2  
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]      30   1.5  
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]     30   1.5  
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.5  
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.5  
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]           30   1.5  
gi|61835172 fragile X mental retardation-related protein 1 isofo...    29   2.0  
gi|61835164 fragile X mental retardation-related protein 1 isofo...    29   2.0  
gi|61835148 fragile X mental retardation-related protein 1 isofo...    29   2.0  
gi|239756342 PREDICTED: hypothetical protein XP_002344885 [Homo ...    28   3.4  
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]            28   3.4  
gi|239750821 PREDICTED: hypothetical protein [Homo sapiens]            28   3.4  
gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo ...    28   3.4  
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ...    28   3.4  
gi|239745183 PREDICTED: hypothetical protein XP_002343384 [Homo ...    28   3.4  
gi|24233530 ankyrin repeat domain 44 [Homo sapiens]                    28   3.4  
gi|57222570 codanin 1 [Homo sapiens]                                   28   3.4  
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F...    28   3.4  
gi|56090620 NFKB activating protein-like [Homo sapiens]                28   3.4  
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]            28   4.4  
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]            28   4.4  
gi|110227615 echinoderm microtubule associated protein like 3 [H...    28   4.4  

>gi|239757298 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 183

 Score =  377 bits (967), Expect = e-105
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MPPAAVLAGAAPPLAPLPAKRWMRECLDLSLSLHLTPVSQIRPPRCRPRAPHRVAAALSA 60
           MPPAAVLAGAAPPLAPLPAKRWMRECLDLSLSLHLTPVSQIRPPRCRPRAPHRVAAALSA
Sbjct: 1   MPPAAVLAGAAPPLAPLPAKRWMRECLDLSLSLHLTPVSQIRPPRCRPRAPHRVAAALSA 60

Query: 61  AAFSHFFFLCLLLSSPAARRFRQDFGCLLFPGLLGMALGLDLHVAFRDQRRRGPLLGAAS 120
           AAFSHFFFLCLLLSSPAARRFRQDFGCLLFPGLLGMALGLDLHVAFRDQRRRGPLLGAAS
Sbjct: 61  AAFSHFFFLCLLLSSPAARRFRQDFGCLLFPGLLGMALGLDLHVAFRDQRRRGPLLGAAS 120

Query: 121 RPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHGR 180
           RPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHGR
Sbjct: 121 RPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHGR 180

Query: 181 FCL 183
           FCL
Sbjct: 181 FCL 183


>gi|239751803 PREDICTED: hypothetical protein XP_002348005 [Homo
           sapiens]
          Length = 260

 Score =  295 bits (754), Expect = 2e-80
 Identities = 144/153 (94%), Positives = 146/153 (95%)

Query: 31  LSLHLTPVSQIRPPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF 90
           LS   +P +   PPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF
Sbjct: 108 LSGDASPPAITNPPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF 167

Query: 91  PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI 150
           PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI
Sbjct: 168 PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI 227

Query: 151 PKSNCHLPTASAPSRAQASARSALRAGHGRFCL 183
           PKSNCHLPTASAPSRAQASARSALRAGHGRFCL
Sbjct: 228 PKSNCHLPTASAPSRAQASARSALRAGHGRFCL 260


>gi|239746294 PREDICTED: hypothetical protein XP_002343725 [Homo
           sapiens]
          Length = 260

 Score =  295 bits (754), Expect = 2e-80
 Identities = 144/153 (94%), Positives = 146/153 (95%)

Query: 31  LSLHLTPVSQIRPPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF 90
           LS   +P +   PPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF
Sbjct: 108 LSGDASPPAITNPPRCRPRAPHRVAAALSAAAFSHFFFLCLLLSSPAARRFRQDFGCLLF 167

Query: 91  PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI 150
           PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI
Sbjct: 168 PGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI 227

Query: 151 PKSNCHLPTASAPSRAQASARSALRAGHGRFCL 183
           PKSNCHLPTASAPSRAQASARSALRAGHGRFCL
Sbjct: 228 PKSNCHLPTASAPSRAQASARSALRAGHGRFCL 260


>gi|239749627 PREDICTED: hypothetical protein XP_002347107 [Homo
           sapiens]
          Length = 115

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 106 FRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSR 165
           +RD+R   P   +A R  GRW S GG R RG   L+    G+ E    +  +    AP R
Sbjct: 44  YRDRRSHSPPALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRE---RSPRVTLGEAPPR 100

Query: 166 AQASARSAL 174
           A A + S+L
Sbjct: 101 AAAWSPSSL 109


>gi|239743902 PREDICTED: hypothetical protein XP_002342970 [Homo
           sapiens]
          Length = 115

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 106 FRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSR 165
           +RD+R   P   +A R  GRW S GG R RG   L+    G+ E    +  +    AP R
Sbjct: 44  YRDRRSHSPPALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRE---RSPRVTLGEAPPR 100

Query: 166 AQASARSAL 174
           A A + S+L
Sbjct: 101 AAAWSPSSL 109


>gi|239755146 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score = 35.0 bits (79), Expect = 0.036
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 106 FRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSR 165
           +RD+R   P   +A R  GRW S GG R RG   L+    G+ E    +  +    A  R
Sbjct: 44  YRDRRSHSPPALSAPRRSGRWPSLGGLRERGRRRLDWRASGLRE---RSPRVTLGEASPR 100

Query: 166 AQASARSAL 174
           A A + S+L
Sbjct: 101 AAAWSPSSL 109


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 113 GPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARS 172
           GP+    SR H     CGG   RGS     P  G L+  +S   +P A +P  A +    
Sbjct: 393 GPVRAPLSRSHTLSGGCGG---RGSKVALLPAGGALQHSRS-MSMPVAHSPPAATSPGSL 448

Query: 173 ALRAGHG 179
           +  +GHG
Sbjct: 449 SSSSGHG 455


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 108  DQRRRGPLLGAASRPHGRWDSCGGSRSRGSP--SLNKPGVGVLEIPKSNCHLP 158
            D   + P   +++RP     S GGS+S GS   S   PGV    IPK    +P
Sbjct: 1016 DTEGKSPSHSSSNRPFTPPTSTGGSKSPGSAGRSQTPPGVATPPIPKITIQIP 1068


>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
          Length = 532

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 114 PLLGAASRPHGRWDSCGGSRSRGSPS---------LNKPGVGVLEIPKSNCHLPTASAPS 164
           P+ G A+      ++CGG  +  +P           + PG G +    S  H       S
Sbjct: 207 PVAGLAALKAHAKEACGGPSAMATPENLASLMKGMASSPGRGGISWQSSIVHYMNRMTQS 266

Query: 165 RAQASARSALRA 176
           +AQA++R AL+A
Sbjct: 267 QAQAASRLALKA 278


>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
          Length = 205

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 14/49 (28%)

Query: 3   PAAVLAGAAPPLAPLP--------------AKRWMRECLDLSLSLHLTP 37
           PAA  A A P L+P+P              ++R+ R+  ++S  LHLTP
Sbjct: 75  PAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTP 123


>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
          Length = 239

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 14/49 (28%)

Query: 3   PAAVLAGAAPPLAPLP--------------AKRWMRECLDLSLSLHLTP 37
           PAA  A A P L+P+P              ++R+ R+  ++S  LHLTP
Sbjct: 75  PAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTP 123


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 9/61 (14%)

Query: 121 RPHGRWDS-CGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHG 179
           RP  R +S C G  SRG+P+L  P +     P   C    A + SRA A AR AL A  G
Sbjct: 260 RPAQRLESGCRGHCSRGAPALAPPKLS----PPFPC---LAQSASRA-AGARRALSASRG 311

Query: 180 R 180
           R
Sbjct: 312 R 312


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 9/61 (14%)

Query: 121 RPHGRWDS-CGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHG 179
           RP  R +S C G  SRG+P+L  P +     P   C    A + SRA A AR AL A  G
Sbjct: 260 RPAQRLESGCRGHCSRGAPALAPPKLS----PPFPC---LAQSASRA-AGARRALSASRG 311

Query: 180 R 180
           R
Sbjct: 312 R 312


>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 9/61 (14%)

Query: 121 RPHGRWDS-CGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASARSALRAGHG 179
           RP  R +S C G  SRG+P+L  P +     P   C    A + SRA A AR AL A  G
Sbjct: 260 RPAQRLESGCRGHCSRGAPALAPPKLS----PPFPC---LAQSASRA-AGARRALSASRG 311

Query: 180 R 180
           R
Sbjct: 312 R 312


>gi|61835172 fragile X mental retardation-related protein 1 isoform
           c [Homo sapiens]
          Length = 536

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 101 DLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGV-GVLEIPKSN 154
           D  +A  D R       +  RP GR  S  G R RG P   K  +  VL+ P SN
Sbjct: 336 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSN 390


>gi|61835164 fragile X mental retardation-related protein 1 isoform
           b [Homo sapiens]
          Length = 539

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 101 DLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGV-GVLEIPKSN 154
           D  +A  D R       +  RP GR  S  G R RG P   K  +  VL+ P SN
Sbjct: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSN 475


>gi|61835148 fragile X mental retardation-related protein 1 isoform
           a [Homo sapiens]
          Length = 621

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 101 DLHVAFRDQRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGV-GVLEIPKSN 154
           D  +A  D R       +  RP GR  S  G R RG P   K  +  VL+ P SN
Sbjct: 421 DWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSN 475


>gi|239756342 PREDICTED: hypothetical protein XP_002344885 [Homo
           sapiens]
          Length = 277

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 15/85 (17%)

Query: 101 DLHVAFRDQRRRGPLLGAASRP------HGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSN 154
           D H     Q  RG    AAS P      HG    C    S  +P+   PG+G       +
Sbjct: 178 DDHHQQHHQHERGQ---AASPPVGPETHHGAKSGCTLGASPQTPAGRSPGLGW------S 228

Query: 155 CHLPTASAPSRAQASARSALRAGHG 179
           C   TA  P+         LRAG G
Sbjct: 229 CPADTAPGPAEGGGGLTGRLRAGEG 253


>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 13/18 (72%), Positives = 13/18 (72%)

Query: 105 AFRDQRRRGPLLGAASRP 122
           AF DQ  RGPL GA SRP
Sbjct: 256 AFGDQSLRGPLAGAQSRP 273


>gi|239750821 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 15/85 (17%)

Query: 101 DLHVAFRDQRRRGPLLGAASRP------HGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSN 154
           D H     Q  RG    AAS P      HG    C    S  +P+   PG+G       +
Sbjct: 178 DDHHQQHHQHERGQ---AASPPVGPETHHGAKSGCTLGASPQTPAGRSPGLGW------S 228

Query: 155 CHLPTASAPSRAQASARSALRAGHG 179
           C   TA  P+         LRAG G
Sbjct: 229 CPADTAPGPAEGGGGLTGRLRAGEG 253


>gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
           sapiens]
          Length = 313

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 35/139 (25%), Positives = 48/139 (34%), Gaps = 9/139 (6%)

Query: 10  AAPPLAPLPAKRWMRECLDLSLSLHLTPVSQIRPPRCRPRAPHRVAAALSAAAFSHFFFL 69
           A P  AP P +RW    ++L+    L P  +   P   P+   R A   S  +      L
Sbjct: 120 ARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVA-RPAFPKSPGSLRSSGSL 178

Query: 70  CLLLSSPAARRF--RQDFGCLLFPGLLGMALGL------DLHVAFRDQRRRGPLLGAASR 121
             L      RR+  R+   CL   G  G    +         +  +  R   P  G   R
Sbjct: 179 ATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPR 238

Query: 122 PHGRWDSCGGSRSRGSPSL 140
              R    G  R R +PSL
Sbjct: 239 AEKRIMEDGAQRGRENPSL 257


>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
           sapiens]
          Length = 303

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 13/18 (72%), Positives = 13/18 (72%)

Query: 105 AFRDQRRRGPLLGAASRP 122
           AF DQ  RGPL GA SRP
Sbjct: 256 AFGDQSLRGPLAGAQSRP 273


>gi|239745183 PREDICTED: hypothetical protein XP_002343384 [Homo
           sapiens]
          Length = 277

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 15/85 (17%)

Query: 101 DLHVAFRDQRRRGPLLGAASRP------HGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSN 154
           D H     Q  RG    AAS P      HG    C    S  +P+   PG+G       +
Sbjct: 178 DDHHQQHHQHERGQ---AASPPVGPETHHGAKSGCTLGASPQTPAGRSPGLGW------S 228

Query: 155 CHLPTASAPSRAQASARSALRAGHG 179
           C   TA  P+         LRAG G
Sbjct: 229 CPADTAPGPAEGGGGLTGRLRAGEG 253


>gi|24233530 ankyrin repeat domain 44 [Homo sapiens]
          Length = 919

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 60  AAAFSHFFFLCLLLSSPAARRFRQDFGCL-LFPGLLG-------MALGLDLHVAFRDQRR 111
           A A+ H   + LLL   A        GC  L  G++        M L  ++ +  +D R 
Sbjct: 652 AVAYGHIDAVSLLLEKEANVDTVDILGCTALHRGIMTGHEECVQMLLEQEVSILCKDSRG 711

Query: 112 RGPLLGAASRPHGRW 126
           R PL  AA+R H  W
Sbjct: 712 RTPLHYAAARGHATW 726


>gi|57222570 codanin 1 [Homo sapiens]
          Length = 1227

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 23/98 (23%)

Query: 89  LFPGLLGMALGLDLHVAFRDQRRRGPLLGAASRPHGRW----------DSCGGSRSRGSP 138
           LFP     +   +  +A R  RRRGP  G A    GR              GG R RGS 
Sbjct: 100 LFPPTEAQSTAAEAPLARRGGRRRGP--GPARERGGRGLEEGVSGESLPGAGGRRLRGSG 157

Query: 139 SLNKPGVGVLEIPK-SNCHL----------PTASAPSR 165
           S ++P + + + P  SN             PT + PSR
Sbjct: 158 SPSRPSLTLSDPPNLSNLEEFPPVGSVPPGPTGTKPSR 195


>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
            subunit [Homo sapiens]
          Length = 1977

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 13/72 (18%)

Query: 48   PRAPH--RVAAALSAAAFSHFFFLCLLLSSPAAR----------RFRQDFGCLLFPGLLG 95
            P+ PH  RV A +++AAF +  FL +LL++ A             +  D   ++F GL  
Sbjct: 1175 PKNPHQYRVWATVNSAAFEYLMFLLILLNTVALAMQHYEQTAPFNYAMDILNMVFTGLFT 1234

Query: 96   MALGLDLHVAFR 107
            + + L + +AF+
Sbjct: 1235 IEMVLKI-IAFK 1245


>gi|56090620 NFKB activating protein-like [Homo sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)

Query: 109 QRRRGPLLGAASRPHGR---WDSCGGSRSRGSPSLNKP 143
           +RRR    G+   P  R   WD C  S SRG   L  P
Sbjct: 17  RRRRRSSSGSPPSPQSRCSSWDGCSRSHSRGREGLRPP 54


>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 189

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 109 QRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI-PKSNCHLPTASAPSRAQ 167
           +RRRG       R  GR ++ GG  S   P+L       L + P + C LP  +   R  
Sbjct: 10  ERRRGE---EKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGC-LPVQAGSGR-- 63

Query: 168 ASARSALRAGHGRF 181
           AS R A+R   GR+
Sbjct: 64  ASRRRAVRRVSGRW 77


>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 189

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 109 QRRRGPLLGAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEI-PKSNCHLPTASAPSRAQ 167
           +RRRG       R  GR ++ GG  S   P+L       L + P + C LP  +   R  
Sbjct: 10  ERRRGE---EKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGC-LPVQAGSGR-- 63

Query: 168 ASARSALRAGHGRF 181
           AS R A+R   GR+
Sbjct: 64  ASRRRAVRRVSGRW 77


>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
           sapiens]
          Length = 896

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 17/55 (30%), Positives = 23/55 (41%)

Query: 117 GAASRPHGRWDSCGGSRSRGSPSLNKPGVGVLEIPKSNCHLPTASAPSRAQASAR 171
           GA+  P G     GGS S G+ S   PG+     P      P  ++ S +  S R
Sbjct: 111 GASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQRADTPRRNSSSSSSPSER 165


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.138    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,577,062
Number of Sequences: 37866
Number of extensions: 434188
Number of successful extensions: 2002
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1984
Number of HSP's gapped (non-prelim): 54
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.