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Search of human proteins with 239757289
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757289 PREDICTED: hypothetical protein [Homo sapiens]
(545 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757289 PREDICTED: hypothetical protein [Homo sapiens] 1134 0.0
gi|239751796 PREDICTED: hypothetical protein XP_002348004 [Homo ... 378 e-105
gi|239746287 PREDICTED: hypothetical protein XP_002343724 [Homo ... 378 e-105
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 39 0.012
gi|61966923 forkhead box B2 [Homo sapiens] 39 0.012
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 38 0.027
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 38 0.027
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 38 0.027
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 37 0.035
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens] 37 0.035
gi|130502140 NEZHA isoform 2 [Homo sapiens] 37 0.035
gi|122937255 NEZHA isoform 1 [Homo sapiens] 37 0.035
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 36 0.079
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 36 0.10
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 36 0.10
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 36 0.10
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 35 0.13
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 35 0.18
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.18
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 35 0.23
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 35 0.23
gi|42475941 zinc finger protein 261 [Homo sapiens] 35 0.23
gi|4827067 zinc finger protein 261 [Homo sapiens] 35 0.23
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 35 0.23
gi|160333411 early B-cell factor 4 [Homo sapiens] 35 0.23
gi|57864582 hornerin [Homo sapiens] 34 0.30
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 34 0.30
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 34 0.30
gi|110347437 latent transforming growth factor beta binding prot... 34 0.30
gi|110347412 latent transforming growth factor beta binding prot... 34 0.30
>gi|239757289 PREDICTED: hypothetical protein [Homo sapiens]
Length = 545
Score = 1134 bits (2932), Expect = 0.0
Identities = 545/545 (100%), Positives = 545/545 (100%)
Query: 1 MHLPSRVHCSQSAAPHAASEQFPAQKTSRWLIRQSFSEVQDPLRPMQAPSGQLVHHLQRG 60
MHLPSRVHCSQSAAPHAASEQFPAQKTSRWLIRQSFSEVQDPLRPMQAPSGQLVHHLQRG
Sbjct: 1 MHLPSRVHCSQSAAPHAASEQFPAQKTSRWLIRQSFSEVQDPLRPMQAPSGQLVHHLQRG 60
Query: 61 VDACPLPNLVPTCRLSSLYPSQQRQGSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHS 120
VDACPLPNLVPTCRLSSLYPSQQRQGSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHS
Sbjct: 61 VDACPLPNLVPTCRLSSLYPSQQRQGSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHS 120
Query: 121 PLPVMVAMVTCGPDPRTSRPHGTRCRPQTGYKLQLVLQQLLVEAIFRGVTAHQEQRQASA 180
PLPVMVAMVTCGPDPRTSRPHGTRCRPQTGYKLQLVLQQLLVEAIFRGVTAHQEQRQASA
Sbjct: 121 PLPVMVAMVTCGPDPRTSRPHGTRCRPQTGYKLQLVLQQLLVEAIFRGVTAHQEQRQASA 180
Query: 181 GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQ 240
GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQ
Sbjct: 181 GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQ 240
Query: 241 AQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELLSKPKSCPTWTPAP 300
AQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELLSKPKSCPTWTPAP
Sbjct: 241 AQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELLSKPKSCPTWTPAP 300
Query: 301 IPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWE 360
IPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWE
Sbjct: 301 IPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWE 360
Query: 361 SIKRQDGVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAV 420
SIKRQDGVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAV
Sbjct: 361 SIKRQDGVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAV 420
Query: 421 ATAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKL 480
ATAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKL
Sbjct: 421 ATAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKL 480
Query: 481 QPQSREQRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESAR 540
QPQSREQRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESAR
Sbjct: 481 QPQSREQRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESAR 540
Query: 541 QAQSP 545
QAQSP
Sbjct: 541 QAQSP 545
>gi|239751796 PREDICTED: hypothetical protein XP_002348004 [Homo
sapiens]
Length = 291
Score = 378 bits (970), Expect = e-105
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 367 GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP 426
GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP
Sbjct: 113 GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP 172
Query: 427 VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE 486
VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE
Sbjct: 173 VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE 232
Query: 487 QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP 545
QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP
Sbjct: 233 QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP 291
Score = 82.8 bits (203), Expect = 7e-16
Identities = 42/46 (91%), Positives = 42/46 (91%)
Query: 150 GYKLQLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLHGL 195
G QLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLH L
Sbjct: 64 GAGCQLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLHVL 109
>gi|239746287 PREDICTED: hypothetical protein XP_002343724 [Homo
sapiens]
Length = 291
Score = 378 bits (970), Expect = e-105
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 367 GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP 426
GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP
Sbjct: 113 GVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVP 172
Query: 427 VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE 486
VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE
Sbjct: 173 VPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSRE 232
Query: 487 QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP 545
QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP
Sbjct: 233 QRGAGGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRGRVGGGESARQAQSP 291
Score = 82.8 bits (203), Expect = 7e-16
Identities = 42/46 (91%), Positives = 42/46 (91%)
Query: 150 GYKLQLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLHGL 195
G QLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLH L
Sbjct: 64 GAGCQLVLQQLLVEAIFRGVTAHQEQRQASAGSKGVTSNGWQLHVL 109
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 38.9 bits (89), Expect = 0.012
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 15/162 (9%)
Query: 186 TSNGWQLHGLGGLRDGGARSPMGLE--GGEVEDPEITGDASSGQ---SSPVQVSQQPLGQ 240
+SN L+ ++ G R P+ + G +V P I S SP+ S P G
Sbjct: 825 SSNPTSLNTAPPVQRGLGRKPLDISVAGSQVHSPGINPLKSPTMHQVQSPMLGS--PSGN 882
Query: 241 AQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELLSKPKSCPTWTPAP 300
++P+ P G + G A A + VLG A + P S P P WT +P
Sbjct: 883 LKSPQTPSQLAGMLA-GPAAAASIKSPPVLGSAAASPVHLKSP----SLPAPSPGWTSSP 937
Query: 301 IP-YWSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAE 341
P S +P P H P + +P + S GP P A++
Sbjct: 938 KPPLQSPGIP--PNHKAPLTMASPAMLGNVESGGPPPPTASQ 977
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 38.9 bits (89), Expect = 0.012
Identities = 54/235 (22%), Positives = 81/235 (34%), Gaps = 20/235 (8%)
Query: 230 PVQVSQQP--LGQAQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELL 287
P Q QQP Q Q P HP G + A A AA + VG+ +G ++ PP L
Sbjct: 195 PSQPPQQPPQQSQPQQPSHP----GKMQEAAAVAAAAAAAAAAAVGS-VGRLSQFPPYGL 249
Query: 288 SKPKSCPTWTPAPIPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEG--PVPSLAAEGSYE 345
+ A + G R +G+ G P+ S+ Y
Sbjct: 250 GSAAAAAAAAAASTSGFKHPFAIENIIG--------RDYKGVLQAGGLPLASVMHHLGYP 301
Query: 346 AAVRLDNTSVQEAWESIKRQDGVLLSGEKVRHTLPSPGWPVGSPGIPI--IAWGAELAVG 403
+L N V W + D V + G G+ G+P+ + A ++
Sbjct: 302 VPGQLGNV-VSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSLP 360
Query: 404 TLGVVLAEAEPTEVVAVATAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCP 458
+ V + V+ + VP A P AP A AA P + + P P
Sbjct: 361 AMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAP 415
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 37.7 bits (86), Expect = 0.027
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 426 PVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSR 485
PVP ++ + P +A A PA+ A PP P + S+ P W+ +SR
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPP------WMNSGPSESR 377
Query: 486 EQRG--AGGPGAGVGGGRSDVQP-RSHTQVKSGGPL-HTP 521
G GGPG GG S P S T G P+ H P
Sbjct: 378 PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNP 417
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 37.7 bits (86), Expect = 0.027
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 426 PVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSR 485
PVP ++ + P +A A PA+ A PP P + S+ P W+ +SR
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPP------WMNSGPSESR 377
Query: 486 EQRG--AGGPGAGVGGGRSDVQP-RSHTQVKSGGPL-HTP 521
G GGPG GG S P S T G P+ H P
Sbjct: 378 PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNP 417
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 37.7 bits (86), Expect = 0.027
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 426 PVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSR 485
PVP ++ + P +A A PA+ A PP P + S+ P W+ +SR
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPP------WMNSGPSESR 377
Query: 486 EQRG--AGGPGAGVGGGRSDVQP-RSHTQVKSGGPL-HTP 521
G GGPG GG S P S T G P+ H P
Sbjct: 378 PYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNP 417
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 37.4 bits (85), Expect = 0.035
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 190 WQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHPQG 249
WQ H GL++ SP L +T A +G P + S GQ Q+ +H +
Sbjct: 286 WQAHRSRGLQN----SPHALSASCPPTSPLTS-APNGYQHPARGSGSLEGQTQSLRHDRQ 340
Query: 250 GIGSIHHGVAQAVQEAAGSV 269
G G+ H +AQ + +A G V
Sbjct: 341 GAGAAHPALAQVLHDALGRV 360
>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 446
Score = 37.4 bits (85), Expect = 0.035
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 190 WQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHPQG 249
WQ H GL++ SP L +T A +G P + S GQ Q+ +H +
Sbjct: 320 WQAHRSRGLQN----SPHALSASCPPTSPLTS-APNGYQHPARGSGSLEGQTQSLRHDRQ 374
Query: 250 GIGSIHHGVAQAVQEAAGSV 269
G G+ H +AQ + +A G V
Sbjct: 375 GAGAAHPALAQVLHDALGRV 394
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 37.4 bits (85), Expect = 0.035
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 32/168 (19%)
Query: 198 LRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHP-QGGIGSIHH 256
L DG A SP G E ++ +SG SSPV + PL + P+ P +G GS+
Sbjct: 327 LPDGHAASPRGTEASPPQN-------NSGSSSPVFTFRHPLLSSGGPQSPLRGSTGSLKS 379
Query: 257 GVAQAVQEAAGSV------------------LGVGADIGDQARLPPELLSKPKSCPTWTP 298
+ + EA G G+ +D+ D P LL S P
Sbjct: 380 SPSMSHMEALGKAWNRQLSRPLSQAVSFSTPFGLDSDV-DVVMGDPVLLRSVSSDSLGPP 438
Query: 299 APIPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGP--VPSLAAEGSY 344
P P + PT P + Q ++S P +P AA+GS+
Sbjct: 439 RPAP---ARTPTQPPPEPGDLPTIEEALQIIHSAEPRLLPDGAADGSF 483
Score = 29.3 bits (64), Expect = 9.7
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 218 EITGDASSGQSSPVQVSQQPLGQAQAP--KHPQG-----GIGSI-HHGVAQ---AVQEAA 266
E +A S PV ++P G+ Q P+ +G + H G+ + AV + +
Sbjct: 648 EAEAEAEEADSGPVPGGERPAGEGQGEPTSRPKAVTFSPDLGPVPHEGLGEYNRAVSKLS 707
Query: 267 GSVLGVGADIGDQARLPPELLSKPKSCPTWTPAPIPYWSSWLPTLPTHGGPAILKTP--R 324
++ + D+ LL+ P++ P P ++W+ PT G A +P R
Sbjct: 708 AALSSLQRDMQRLTDQQQRLLAPPEA-----PGSAPPPAAWVIPGPTTGPKAASPSPARR 762
Query: 325 TRQGLNSEGPVPS 337
S GP PS
Sbjct: 763 VPATRRSPGPGPS 775
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 37.4 bits (85), Expect = 0.035
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 32/168 (19%)
Query: 198 LRDGGARSPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHP-QGGIGSIHH 256
L DG A SP G E ++ +SG SSPV + PL + P+ P +G GS+
Sbjct: 354 LPDGHAASPRGTEASPPQN-------NSGSSSPVFTFRHPLLSSGGPQSPLRGSTGSLKS 406
Query: 257 GVAQAVQEAAGSV------------------LGVGADIGDQARLPPELLSKPKSCPTWTP 298
+ + EA G G+ +D+ D P LL S P
Sbjct: 407 SPSMSHMEALGKAWNRQLSRPLSQAVSFSTPFGLDSDV-DVVMGDPVLLRSVSSDSLGPP 465
Query: 299 APIPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGP--VPSLAAEGSY 344
P P + PT P + Q ++S P +P AA+GS+
Sbjct: 466 RPAP---ARTPTQPPPEPGDLPTIEEALQIIHSAEPRLLPDGAADGSF 510
Score = 29.3 bits (64), Expect = 9.7
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 218 EITGDASSGQSSPVQVSQQPLGQAQAP--KHPQG-----GIGSI-HHGVAQ---AVQEAA 266
E +A S PV ++P G+ Q P+ +G + H G+ + AV + +
Sbjct: 675 EAEAEAEEADSGPVPGGERPAGEGQGEPTSRPKAVTFSPDLGPVPHEGLGEYNRAVSKLS 734
Query: 267 GSVLGVGADIGDQARLPPELLSKPKSCPTWTPAPIPYWSSWLPTLPTHGGPAILKTP--R 324
++ + D+ LL+ P++ P P ++W+ PT G A +P R
Sbjct: 735 AALSSLQRDMQRLTDQQQRLLAPPEA-----PGSAPPPAAWVIPGPTTGPKAASPSPARR 789
Query: 325 TRQGLNSEGPVPS 337
S GP PS
Sbjct: 790 VPATRRSPGPGPS 802
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 36.2 bits (82), Expect = 0.079
Identities = 39/138 (28%), Positives = 52/138 (37%), Gaps = 26/138 (18%)
Query: 414 PTEVVAVATAWVPVPVALAGPAAPRACGVA----EAAGPASFAVLPPCPGCLPWHSSQKP 469
PT AV +A P P P + GV +A GP PP P +P P
Sbjct: 151 PTPPPAVTSAPPGAP-----PPTPPSSGVPTTPPQAGGP------PPPPAAVPG-----P 194
Query: 470 GPRLRQWLWKLQPQSREQRGA----GGPGAGVGGGRSDVQPRSHTQVKSGGPLHTPWPQS 525
GP +Q P+ + G GGPG GG R + + G H P+ Q
Sbjct: 195 GPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQ- 253
Query: 526 SKHLRGRVGGGESARQAQ 543
+H +G GG R +
Sbjct: 254 -QHHQGPPPGGPGGRSEE 270
Score = 31.2 bits (69), Expect = 2.5
Identities = 52/188 (27%), Positives = 64/188 (34%), Gaps = 34/188 (18%)
Query: 182 SKGVTSNGWQLHGLGGLRDG--GARSPM-GLEGGEVEDPEITGDASSGQSSPV------Q 232
S+G G+ G GG R G RSP G+ + P G SG P+ Q
Sbjct: 8 SRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQ 67
Query: 233 VSQQPLGQAQAPKHPQGGIGSIHHGVAQ--------------AVQEAAGSVLGVG----A 274
QQP Q P+ P H Q V + G GVG A
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 275 DIGDQARLPPELLSKPKSCPTWTPAPIPYWSSWLPTLPTHGGPA--ILKTPRTRQGLNSE 332
PP + P S P TP P P +S P P P+ + TP +
Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPP-----QAG 182
Query: 333 GPVPSLAA 340
GP P AA
Sbjct: 183 GPPPPPAA 190
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 35.8 bits (81), Expect = 0.10
Identities = 63/251 (25%), Positives = 85/251 (33%), Gaps = 36/251 (14%)
Query: 259 AQAVQEAAGSVLGVGADIGDQ--------------ARLPPELLSKPKSCPT-WTPAPIPY 303
AQ V++ G L G D ++ P ++ KS + W P P +
Sbjct: 330 AQEVEDPFGFALEAGCQAWDTKPSIMQSFNDPLLCGKIRPRKKARQKSQKSPWQPFPDDH 389
Query: 304 WSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWESIK 363
+ P T G A+ + + Q +GP + + +L + E + +
Sbjct: 390 SACLRPGSETDAGRAVSQAQESVQS-KVKGPGKMSHSSSGPASVSQLSSWKTPEQPDPVW 448
Query: 364 RQDGVLLSGEK---VRHTLPSPGWPVGS--------PGIPI------IAWGAELAVGTLG 406
Q V GEK R LPS + S G P+ A A A
Sbjct: 449 VQSSVSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAA 508
Query: 407 VVLAEAEPTEVVAVATAWVPVPVALAGPA--APRACGVAEAAGPASFAVLPPCPGCLPWH 464
A A A+A A P A A PA A A A AA PA A P H
Sbjct: 509 AAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSH 568
Query: 465 SSQKPGPRLRQ 475
SQKP L Q
Sbjct: 569 -SQKPSVPLIQ 578
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.8 bits (81), Expect = 0.10
Identities = 50/159 (31%), Positives = 64/159 (40%), Gaps = 26/159 (16%)
Query: 409 LAEAEPT--EVVAVATAW-----VPVPVALAGPAAPRACGVAEA---AGPA-------SF 451
L +A P+ EVV A P P A G A P AC AE AGP +
Sbjct: 166 LGDASPSAPEVVGARAAVPRSFSAPYPTA-GGSAGPEACSSAERRARAGPFLTPSPLHAV 224
Query: 452 AVLPPCPGCLPWHSSQKPGPRLRQWLWKLQP--QSREQRGAGGPGAGVGGGRSDVQPRSH 509
A+ P P P S G R + + R +RGAG P GG +D PR
Sbjct: 225 AMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGG--ADGGPRRQ 282
Query: 510 TQVKSGGPLHTPWPQSSKHLR----GRVGGGESARQAQS 544
V+ P +P P S++ R RVGG ++ A S
Sbjct: 283 NSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALS 321
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 35.8 bits (81), Expect = 0.10
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 426 PVPVALAGPAAPRACGVAEAAGPA-SFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQS 484
P P GP + AGP A PP P + Q + WKL P+
Sbjct: 144 PAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLLPEQ 203
Query: 485 REQRGAGGPGAGVGGGR 501
GAG PGAG G R
Sbjct: 204 AAPPGAGDPGAGGCGRR 220
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 35.4 bits (80), Expect = 0.13
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 54/262 (20%)
Query: 176 RQASAGSKGVTSNGWQLHG-LGGLRDGGARSPMGLEGGEVEDPEITGDASSGQSSP-VQV 233
RQA+A +T NG +G ++ + G++ V +PE TG++SS + +P Q
Sbjct: 91 RQAAA----LTRNGGTFEKQIGEVKPRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQE 146
Query: 234 SQQPLGQAQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGVGADIGDQARLPPELLSKPKSC 293
+Q+ LG +P+ P G GS +G+ L D + EL P
Sbjct: 147 AQRALG--TSPELPTGVTGS------------SGTRLPPTPKAQDGGPVGTELFRVP--- 189
Query: 294 PTWTPAPIPYWSSWLPTLPTHGGPAILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNT 353
P+ ++W + P GP++ +T + +++ P + A+ S A +
Sbjct: 190 ------PVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDP-STQASTASSPAPEENAPS 242
Query: 354 SVQEAW---------ESIKRQDGVLLSGEKVRHTLPSPGWPVGSPGIPIIAWGAELAVGT 404
Q W S++R++ G HT W GS +A +
Sbjct: 243 EGQRVWGQGQSPRPENSLEREE----MGPVPAHTDAFQDWGPGS-----------MAHVS 287
Query: 405 LGVVLAEAEPTEVVAVATAWVP 426
+ V +E P+ + +W P
Sbjct: 288 VVPVSSEGTPSREPVASGSWTP 309
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 35.0 bits (79), Expect = 0.18
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 69 LVPTCRLSSLYPSQQRQ-GSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHSPLPVMVA 127
L P C+ + ++R GS CP +L + +HG T H TP G P+ V
Sbjct: 122 LAPLCQRQAQVLWEERMVGSGCPSRTLNSSGEGWHGPACPTPPHPTPYLG----YPLKVE 177
Query: 128 MVTCGPDPRTSRPH 141
P PR + PH
Sbjct: 178 SEHVFPTPRLALPH 191
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.0 bits (79), Expect = 0.18
Identities = 52/196 (26%), Positives = 74/196 (37%), Gaps = 30/196 (15%)
Query: 273 GADIGDQARLP-PELLSKPKSCPTWTPAPIPYWSSWLPT-------------LPTHGGPA 318
G + + +P P + P S T PAP+P S LP+ PT GG +
Sbjct: 1639 GTSLASASPVPAPTPVLAPSSTQTMLPAPVP---SPLPSPASTQTLALAPALAPTLGGSS 1695
Query: 319 ILKTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWESIKRQDGVLLSGEKVRHT 378
+T G N +GP P+ S A L T Q ++ G L +
Sbjct: 1696 PSQTLSLGTG-NPQGPFPTQTL--SLTPASSLVPTPAQ----TLSLAPGPPLGPTQTLSL 1748
Query: 379 LPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVPVPVALAGPAAPR 438
P+P SP P A LA + L + + ++ P PV GPAA +
Sbjct: 1749 APAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLS----PAPVPTLGPAAAQ 1804
Query: 439 ACGVAEAA--GPASFA 452
+A A+ PAS A
Sbjct: 1805 TLALAPASTQSPASQA 1820
Score = 32.0 bits (71), Expect = 1.5
Identities = 67/269 (24%), Positives = 90/269 (33%), Gaps = 35/269 (13%)
Query: 217 PEITGDASSGQ----SSPVQVSQQPLGQAQAPKHPQGGIGSIHHGVAQAVQEAAGSVLGV 272
PE++ A SSP+ V G A +P P + V+ V S L +
Sbjct: 1383 PEVSASAPGAAPLTISSPLHVPSSLPGPASSPM-PIPNSSPLASPVSSTVSVPLSSSLPI 1441
Query: 273 GADIGDQARLPPELLSKPKSCPTWTPAPIPYWSSWLPTLPTHGGPAILK--TPRTRQGLN 330
P L P S P P P S GPA+L TP +
Sbjct: 1442 SV---------PTTLPAPASAPLTIPISAPLTVS-------ASGPALLTSVTPPLAPVVP 1485
Query: 331 SEGPVPSLAAEGSYEAAVRLD-NTSVQEAWESIKRQDGVLLSGEKVRHTLPSPGWPVGSP 389
+ PSLA G+ +A L + + S + LL H +P V
Sbjct: 1486 AAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSH-VPGLNSTVAPA 1544
Query: 390 GIPIIAWGAELAVGTLGVVLAEAEPTEVVAVATAWVPVPVALAGPAAPRACGVAEAAGP- 448
P++ + LA ++A A++ ALA P AP A P
Sbjct: 1545 CSPVLVPASALASPFPSAPNPAPAQASLLAPASS---ASQALATPLAPMAAPQTAILAPS 1601
Query: 449 -----ASFAVLPPCPGCLP-WHSSQKPGP 471
A VL P PG P SSQ P P
Sbjct: 1602 PAPPLAPLPVLAPSPGAAPVLASSQTPVP 1630
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 34.7 bits (78), Expect = 0.23
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 400 LAVGTLGVVLAEAEPTEVVAVATAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCPG 459
+A + V A PT V A A A VP P A A A ++ PA+ A PG
Sbjct: 1 MATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPG 60
Query: 460 CLPWHS---SQKPGPRL 473
P + +Q P P L
Sbjct: 61 QTPASAQAPAQTPAPAL 77
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 34.7 bits (78), Expect = 0.23
Identities = 60/230 (26%), Positives = 86/230 (37%), Gaps = 41/230 (17%)
Query: 323 PRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWESIKRQD------GVLLSGEKVR 376
P G S VPS AA G E + +S + +S+ +D G G++
Sbjct: 1138 PSRPGGPQSRARVPSRAAPGKSEPPSKRPLSSKSQ--QSVSAEDDEEEDAGFFKGGKEDL 1195
Query: 377 HTLPSPGWPVGSPGIPIIAWGAELAVGTLGVVLAEAEPTEVVAVAT---AWVPVPVALAG 433
+ P WP S G + A G+L A+ E +A+A + PV L
Sbjct: 1196 LSSSVPKWPSSST-----PRGGKDADGSL----AKEEREPAIALAPRGGSLAPVKRPLPP 1246
Query: 434 P--AAPRACGVAEAAGPASFAVLPPCPGCLPW----------HSSQKPGPRLRQWLWKLQ 481
P ++PRA V P S A + P G PW H S P LRQ + +
Sbjct: 1247 PPGSSPRASHVPSRLPPRSAATVSPVAGTHPWPQYTTRAPPGHFSTTPMLSLRQRMMHAR 1306
Query: 482 PQSREQRGAGGPGAGVG-GGRSDVQ----PRSHTQVKS----GGPLHTPW 522
++ R P G GR +V+ P S+ + GP T W
Sbjct: 1307 FRNPLSRQPARPSYRQGYNGRPNVEGKVLPGSNGKPNGQRIINGPQGTKW 1356
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 205 SPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHP 247
SP+ L+ +E+ E T A++ + SP Q + P GQ Q+P P
Sbjct: 148 SPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAP 190
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 205 SPMGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHP 247
SP+ L+ +E+ E T A++ + SP Q + P GQ Q+P P
Sbjct: 148 SPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAP 190
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 34.7 bits (78), Expect = 0.23
Identities = 82/327 (25%), Positives = 105/327 (32%), Gaps = 78/327 (23%)
Query: 202 GARSP-MGLEGGEVEDPEITGDASSGQSSPVQVSQQPLGQAQAPKHPQGGIGSIHHGVAQ 260
GA P G + ++ Q +P Q +GQ Q P P GG VAQ
Sbjct: 234 GAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGG------AVAQ 287
Query: 261 AVQEAAGSVLGVGADIGDQARLPPELLSKPKSCPTWTPAPIPYWSSWLPTLPTHGGPAIL 320
+ A LPP P P P ++ P+ P GP
Sbjct: 288 S-----------------SAPLPP--------FPGAATGPQPMMAAAQPSQPQGAGPGGQ 322
Query: 321 KTPRTRQGLNSEGPVPSLAAEGSYEAAVRLDNTSVQEAWESIKRQDGVLL----SGEK-- 374
P T L P SL + Q A+ + G LL SG+
Sbjct: 323 TLPPTNVTLAQ--PAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSEY 380
Query: 375 -VRHTL----PSPGWPVGSPGIPIIAWGAELAVGT------LGVVL--AEAEPTEVVAVA 421
+H PSP P + A A L VGT +G L A ++P+E +A
Sbjct: 381 LQQHVAGLQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPR 440
Query: 422 TAWVPVPVALAGPAAPRACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQ 481
T P P P A G V+ PC G P + Q
Sbjct: 441 TG--PAQGGQVAPCQPTGVPPATVGG-----VVQPCLG--PAGAG--------------Q 477
Query: 482 PQS--REQRGAGGPGAGVGGGRSDVQP 506
PQS Q G GP + V GG V P
Sbjct: 478 PQSVPPPQMGGSGPLSAVPGGPHAVVP 504
>gi|160333411 early B-cell factor 4 [Homo sapiens]
Length = 598
Score = 34.7 bits (78), Expect = 0.23
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 373 EKVRHTLPS-PGWPVGSPGIPIIAWGAELAVGTLGV-------VLAEAEPTEVVAVATAW 424
++++ +P PG P P ++ A+LA GV +L A +T
Sbjct: 347 QRLQKVIPRHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPR 406
Query: 425 VPVPVALAGPAAPRAC--GVAEAAGPASFAVLPPCPGCLPWH--SSQKPGPRLRQWLWKL 480
P P+A P+ P G+ + P + AV PG P + S PR +
Sbjct: 407 APGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRG----FAP 462
Query: 481 QPQSREQRGAGGPGAGVGG 499
P S++ GG GAG+GG
Sbjct: 463 SPGSQQSGYGGGLGAGLGG 481
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 34.3 bits (77), Expect = 0.30
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 172 HQEQRQASA---GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQS 228
H+E R + G G +S HG G G + S G G G SG S
Sbjct: 1052 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS-CGQHGASSGQSSSHGQHGSGSS 1110
Query: 229 SPVQVSQQPLGQAQAPKHPQGGIGS 253
+Q G Q+P H Q G GS
Sbjct: 1111 QSSGYGRQGSGSGQSPGHGQRGSGS 1135
Score = 34.3 bits (77), Expect = 0.30
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 172 HQEQRQASA---GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQS 228
H+E R + G G +S HG G G + S G G G SG S
Sbjct: 1522 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS-CGQHGASSGQSSSHGQHGSGSS 1580
Query: 229 SPVQVSQQPLGQAQAPKHPQGGIGS 253
+Q G Q+P H Q G GS
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGS 1605
Score = 34.3 bits (77), Expect = 0.30
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 172 HQEQRQASA---GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQS 228
H+E R + G G +S HG G G + S G G G SG S
Sbjct: 1992 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSS-CGQHGASSGQSSSHGQHGSGSS 2050
Query: 229 SPVQVSQQPLGQAQAPKHPQGGIGS 253
+Q G Q+P H Q G GS
Sbjct: 2051 QSSGYGRQGSGSGQSPGHGQRGSGS 2075
Score = 34.3 bits (77), Expect = 0.30
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 172 HQEQRQASA---GSKGVTSNGWQLHGLGGLRDGGARSPMGLEGGEVEDPEITGDASSGQS 228
H+E R + G G +S HG G G + S G G G SG S
Sbjct: 2462 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS-CGQHGASSGQSSSHGQHGSGSS 2520
Query: 229 SPVQVSQQPLGQAQAPKHPQGGIGS 253
+Q G Q+P H Q G GS
Sbjct: 2521 QSSGYGRQGSGSGQSPGHGQRGSGS 2545
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 34.3 bits (77), Expect = 0.30
Identities = 42/139 (30%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 379 LPSPGWPVGS-PGIPIIAW-GAELAV--GTLGVVLAEAEPTEVVAVATAWVPVPVALAGP 434
L P +P S PG+P + G +L G++G E E E V P AG
Sbjct: 34 LSKPDFPGNSSPGLPSSSSPGRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGG 93
Query: 435 A--------APRACGVAEAAGPASFAV---LPPCPGCLPWHSSQKPGPRLRQWLWKLQPQ 483
AP C +A P A +P P P S P P W+ QP
Sbjct: 94 LGEELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPA 153
Query: 484 SREQRGAGGPGA-GVGGGR 501
+ G G GA G GGGR
Sbjct: 154 RSVRLGGPGGGAGGAGGGR 172
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 34.3 bits (77), Expect = 0.30
Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 438 RACGVAEAAGPASFAVLPPCPGCLPWHSSQKPGPRLRQWLWKLQPQSREQRGAGGPGAGV 497
R G EA GP PCP P+ P PR+ L + +RG+G P A
Sbjct: 421 RGSGAPEAEGPL------PCPSPAPFSPLPAPSPRISDIL------NSVRRGSGTPEA-- 466
Query: 498 GGGRSDVQPRSHTQVKSGGPLHTPWPQSSKHLRG-RVGGGESARQAQSP 545
G P GPL +P P+ S L R G G + SP
Sbjct: 467 -EGPLSAGPPPCLSPALLGPLSSPSPRISDILNSVRRGSGTPEAEGPSP 514
>gi|110347437 latent transforming growth factor beta binding protein
4 isoform c [Homo sapiens]
Length = 1557
Score = 34.3 bits (77), Expect = 0.30
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 65 PLPNLVPTCRLSSLYPSQQRQGSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHSPLPV 124
P +PT RL P + + PGP LP P S+ G P G S +
Sbjct: 433 PSAGFLPTHRLE---PRPEPRPDPRPGPELPLP------SIPAWTGPEIPESGPSSGMCQ 483
Query: 125 MVAMVTCGPDPRTSRPHGTRCRPQTGYKL 153
V CGP SRP G C +G++L
Sbjct: 484 RNPQV-CGPGRCISRPSGYTCACDSGFRL 511
>gi|110347412 latent transforming growth factor beta binding protein
4 isoform b [Homo sapiens]
Length = 1587
Score = 34.3 bits (77), Expect = 0.30
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 65 PLPNLVPTCRLSSLYPSQQRQGSHCPGPSLPCPAQAFHGSLSCTGGHRTPIRGLHSPLPV 124
P +PT RL P + + PGP LP P S+ G P G S +
Sbjct: 463 PSAGFLPTHRLE---PRPEPRPDPRPGPELPLP------SIPAWTGPEIPESGPSSGMCQ 513
Query: 125 MVAMVTCGPDPRTSRPHGTRCRPQTGYKL 153
V CGP SRP G C +G++L
Sbjct: 514 RNPQV-CGPGRCISRPSGYTCACDSGFRL 541
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,532,929
Number of Sequences: 37866
Number of extensions: 1699677
Number of successful extensions: 6390
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 6050
Number of HSP's gapped (non-prelim): 577
length of query: 545
length of database: 18,247,518
effective HSP length: 107
effective length of query: 438
effective length of database: 14,195,856
effective search space: 6217784928
effective search space used: 6217784928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.