Guide to the Human Genome
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Search of human proteins with 239756643

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756643 PREDICTED: hypothetical protein [Homo sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756643 PREDICTED: hypothetical protein [Homo sapiens]           355   1e-98
gi|239745624 PREDICTED: hypothetical protein XP_002344159 [Homo ...   351   1e-97
gi|239751132 PREDICTED: hypothetical protein [Homo sapiens]           210   5e-55
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    40   7e-04
gi|22027541 programmed cell death 7 [Homo sapiens]                     40   0.001
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             38   0.003
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              38   0.005
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot...    37   0.008
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]            37   0.010
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    36   0.017
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]            36   0.017
gi|46409434 hypothetical protein LOC388759 [Homo sapiens]              36   0.017
gi|4504713 insulinoma-associated 1 [Homo sapiens]                      36   0.017
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]            35   0.023
gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo ...    35   0.023
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]            35   0.023
gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo ...    35   0.023
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ...    35   0.023
gi|239742971 PREDICTED: hypothetical protein XP_002342727 [Homo ...    35   0.023
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            35   0.030
gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]      35   0.030
gi|153792074 proline rich 12 [Homo sapiens]                            35   0.030
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]            35   0.039
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    34   0.050

>gi|239756643 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score =  355 bits (910), Expect = 1e-98
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR 60
           MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR
Sbjct: 1   MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR 60

Query: 61  GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP 120
           GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP
Sbjct: 61  GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP 120

Query: 121 PRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE 165
           PRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE
Sbjct: 121 PRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE 165


>gi|239745624 PREDICTED: hypothetical protein XP_002344159 [Homo
           sapiens]
          Length = 165

 Score =  351 bits (901), Expect = 1e-97
 Identities = 164/165 (99%), Positives = 164/165 (99%)

Query: 1   MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR 60
           MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR
Sbjct: 1   MKCWYSAPCSPGTMVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVR 60

Query: 61  GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP 120
           GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP
Sbjct: 61  GGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP 120

Query: 121 PRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE 165
           PRAHWPPR RPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE
Sbjct: 121 PRAHWPPRRRPASSLAVGLRGRSVLILWRPIPDRKACATPRWGLE 165


>gi|239751132 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 118

 Score =  210 bits (534), Expect = 5e-55
 Identities = 101/102 (99%), Positives = 101/102 (99%)

Query: 14  MVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVRGGRARPWPAAGMG 73
           MVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVRGGRARPWPAAGMG
Sbjct: 1   MVEPSYLKVTLWMTAEPSSRTRLYAARQASLSILVAIAAEPQRDTVRGGRARPWPAAGMG 60

Query: 74  ARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRP 115
           ARRVRAEGARAGGGGDGYA PASCERGGGFHCGRRARGDPRP
Sbjct: 61  ARRVRAEGARAGGGGDGYAVPASCERGGGFHCGRRARGDPRP 102


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 35/95 (36%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 30   PSSRTRLYAARQASLSILVAIAAEPQRDTVR-GGRARPWPAAGMGARRVRAEGAR---AG 85
            P  + R  A R AS +    +AA    D  R GG+  P  AAG    R    GA    AG
Sbjct: 1332 PGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAFAG 1391

Query: 86   GGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPP 120
             GG G  A  +  R G       AR  PRP P PP
Sbjct: 1392 PGGGGSGALEAEGRAG-------ARAGPRPGPRPP 1419


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 35/123 (28%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 54  PQRDTVRGGRARPWPAAGMGAR-RVRAEGARAGGGGDGY---------AAPASCERGGGF 103
           PQR     G + P+    +  + R  AE +R GGG   +           P  C    G 
Sbjct: 42  PQRPGPFPGASAPFLQPPLALQPRASAEASRGGGGAGAFYPVPPPPLPPPPPQCRPFPGT 101

Query: 104 HCGRRARGDPRPWPAPPPRAHWPPRPRPASSL-----AVGLRGRSVLILWRPIPDRKACA 158
             G R R  P P P PP    WP  P P + +        LR R  L      P R  C 
Sbjct: 102 DAGERPRPPP-PGPGPPWSPRWPEAPPPPADVLGDAALQRLRDRQWLEAVFGTPRRAGCP 160

Query: 159 TPR 161
            P+
Sbjct: 161 VPQ 163


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 27/73 (36%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPA-----SCERGGGFHCGRRARGDPR 114
           R GR RP PA   G+ R  +    +   G G  AP        ERG G H  R     PR
Sbjct: 405 RRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPR 464

Query: 115 PWPA---PPPRAH 124
             PA   P P AH
Sbjct: 465 ARPASTSPSPGAH 477



 Score = 28.1 bits (61), Expect = 3.6
 Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 16/91 (17%)

Query: 62  GRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPW----- 116
           G   P P+ G G       G+    GG G  + A   R G  H        P P      
Sbjct: 296 GSRSPSPSGGSGW------GSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKA 349

Query: 117 ----PAPPPRAHWPPRPRPASSLAVGLRGRS 143
               P PP R    P PR A S + G  GR+
Sbjct: 350 AAAAPTPPARGKESPSPRSAPS-SQGRGGRA 379


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 80   EGARAGGGGDGYAAPASCERGGGFHCGRRA--RGDPRPWPAPPPRAHWPPRPRP 131
            +  R G GG   ++ +S   GGG   GR    RGD R WP+P  R+  PP  RP
Sbjct: 1395 QNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSR-PPEERP 1447



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 15/98 (15%)

Query: 49   AIAAEPQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGF----- 103
            A +AEPQ   +  G   P P++    +R+  E         G A P+S +  GG      
Sbjct: 1806 AASAEPQSKNLDSGHCVPEPSSS--GQRLYPEVFY------GSAGPSSSQISGGAMDSQL 1857

Query: 104  --HCGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGL 139
              + G    G P   P      + PP P P S+L  GL
Sbjct: 1858 HPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGL 1895


>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
           G-T [Homo sapiens]
          Length = 392

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 31/134 (23%)

Query: 45  SILVAIAAEPQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGG-GF 103
           +I VA A +P  ++ R G   P P    G  R    G R GGGG       S  RGG   
Sbjct: 78  AIKVAQATKPAFESSRRG---PPPPRSRGRPRF-LRGTRGGGGGPR----RSPSRGGPDD 129

Query: 104 HCGRRARGDPRPWPA-------PPPRAHWPPRPR-----PASSLAVGLRGRSVLILWR-- 149
             G  A  D RP  A       PPPR   PP  R     PA S   G+RGR++ +  R  
Sbjct: 130 DGGYTADFDLRPSRAPMPMKRGPPPRRVGPPPKRAAPSGPARSSGGGMRGRALAVRGRDG 189

Query: 150 --------PIPDRK 155
                   P+P R+
Sbjct: 190 YSGPPRREPLPPRR 203


>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 36.6 bits (83), Expect = 0.010
 Identities = 32/81 (39%), Positives = 34/81 (41%), Gaps = 13/81 (16%)

Query: 62  GRARPWPAAGMGAR-----RVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPW 116
           G AR   A G G R     RVRA  ARA  GG     PA   RG      R ARG  R  
Sbjct: 32  GLARAGLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARG-----PRAARGGARAA 86

Query: 117 PAPPPRAHWPPRP---RPASS 134
           P P      P  P   RP+S+
Sbjct: 87  PMPSSAPRGPTEPALRRPSSA 107



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 28/79 (35%), Positives = 30/79 (37%), Gaps = 17/79 (21%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAP 119
           RGG AR  PA G       A G RA  GG   AAP               RG   P    
Sbjct: 61  RGGGARERPAEG-------ARGPRAARGG-ARAAPMP---------SSAPRGPTEPALRR 103

Query: 120 PPRAHWPPRPRPASSLAVG 138
           P  A  P    P+SS +VG
Sbjct: 104 PSSAERPLAQAPSSSASVG 122


>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 23/108 (21%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGG-GDGYAAPA-----SCERGGGFH--------- 104
           +G  +R   +A  GAR VRA G    GG G GY + A     S   GGG           
Sbjct: 46  KGSTSRAESSAARGAR-VRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQP 104

Query: 105 --CGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRP 150
             CGR   G+ R W   P +  W P+ R     A     R+ L+L RP
Sbjct: 105 GLCGRAGTGEKRKWER-PGKETWKPKTRRPRLRA----PRAALLLPRP 147


>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 37/117 (31%), Positives = 44/117 (37%), Gaps = 23/117 (19%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPA- 118
           RG  AR  PAA     R        G  G G  +  S   GG         G  RPW A 
Sbjct: 186 RGNHARK-PAALPVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA--------GQGRPWTAR 236

Query: 119 PPPRAHWPPRPR-----PASSLAVGLR----GRSVLILWRPIP----DRKACATPRW 162
           PPP  H  PRP+     P ++  +G R      S   +W   P     R+ CAT  W
Sbjct: 237 PPPIPHTRPRPKCACSAPGTNRNLGPRVAGANHSASGVWAVSPRVTRARRGCATRSW 293


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 47/151 (31%), Positives = 56/151 (37%), Gaps = 51/151 (33%)

Query: 54  PQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGG---DGYAAPASCERGGGFHCGRRAR 110
           P+   +RG +  P P A    R     G RAGGGG    G  AP    RGGG  C  RA 
Sbjct: 15  PRVQCIRGSQRVPQPPAARSPR-----GPRAGGGGGDAGGGGAPVRRARGGG--CWARAY 67

Query: 111 GDPR---------------PWPAPPPRAH-----------------WPPR-PRPASSLAV 137
            D R               P  APP                     +PPR PRP +S + 
Sbjct: 68  QDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127

Query: 138 G----LRGRSVLILWRP--IPDRKA--CATP 160
                LR RS   L  P   P R +  C++P
Sbjct: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSP 158



 Score = 29.6 bits (65), Expect = 1.2
 Identities = 42/122 (34%), Positives = 48/122 (39%), Gaps = 25/122 (20%)

Query: 27  TAEPSSRTRLYAARQASLSILVAIAAEPQRDT-------VRG--GRARPWPAAGMGARRV 77
           +A  S++TRL   R+ S S L A    PQR +       VRG  G A P    G  A  +
Sbjct: 124 SASFSNQTRL---RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180

Query: 78  RAEGARAGG--------GGDGYAAPASCER---GGGFHCGRRARGDPRPWPAPPPRAHWP 126
            A  A  GG        G D   A A   R   G G   G R R      PAP P    P
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRP--RGP 238

Query: 127 PR 128
           PR
Sbjct: 239 PR 240


>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 23/108 (21%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGG-GDGYAAPA-----SCERGGGFH--------- 104
           +G  +R   +A  GAR VRA G    GG G GY + A     S   GGG           
Sbjct: 46  KGSTSRAESSAARGAR-VRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQP 104

Query: 105 --CGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRP 150
             CGR   G+ R W   P +  W P+ R     A     R+ L+L RP
Sbjct: 105 GLCGRAGTGEKRKWER-PGKETWKPKTRRPRLRA----PRAALLLPRP 147


>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 37/117 (31%), Positives = 44/117 (37%), Gaps = 23/117 (19%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPA- 118
           RG  AR  PAA     R        G  G G  +  S   GG         G  RPW A 
Sbjct: 186 RGNHARK-PAALPVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA--------GQGRPWTAR 236

Query: 119 PPPRAHWPPRPR-----PASSLAVGLR----GRSVLILWRPIP----DRKACATPRW 162
           PPP  H  PRP+     P ++  +G R      S   +W   P     R+ CAT  W
Sbjct: 237 PPPIPHTRPRPKCACSAPGTNRNLGPRVAGANHSASGVWAVSPRVTRARRGCATRSW 293


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 47/151 (31%), Positives = 56/151 (37%), Gaps = 51/151 (33%)

Query: 54  PQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGG---DGYAAPASCERGGGFHCGRRAR 110
           P+   +RG +  P P A    R     G RAGGGG    G  AP    RGGG  C  RA 
Sbjct: 15  PRVQCIRGSQRVPQPPAARSPR-----GPRAGGGGGDAGGGGAPVRRARGGG--CWARAY 67

Query: 111 GDPR---------------PWPAPPPRAH-----------------WPPR-PRPASSLAV 137
            D R               P  APP                     +PPR PRP +S + 
Sbjct: 68  QDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASF 127

Query: 138 G----LRGRSVLILWRP--IPDRKA--CATP 160
                LR RS   L  P   P R +  C++P
Sbjct: 128 SNQTRLRRRSASALPAPRLCPQRASPGCSSP 158



 Score = 29.6 bits (65), Expect = 1.2
 Identities = 42/122 (34%), Positives = 48/122 (39%), Gaps = 25/122 (20%)

Query: 27  TAEPSSRTRLYAARQASLSILVAIAAEPQRDT-------VRG--GRARPWPAAGMGARRV 77
           +A  S++TRL   R+ S S L A    PQR +       VRG  G A P    G  A  +
Sbjct: 124 SASFSNQTRL---RRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAAL 180

Query: 78  RAEGARAGG--------GGDGYAAPASCER---GGGFHCGRRARGDPRPWPAPPPRAHWP 126
            A  A  GG        G D   A A   R   G G   G R R      PAP P    P
Sbjct: 181 AARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRP--RGP 238

Query: 127 PR 128
           PR
Sbjct: 239 PR 240


>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 23/108 (21%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGG-GDGYAAPA-----SCERGGGFH--------- 104
           +G  +R   +A  GAR VRA G    GG G GY + A     S   GGG           
Sbjct: 46  KGSTSRAESSAARGAR-VRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQP 104

Query: 105 --CGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRP 150
             CGR   G+ R W   P +  W P+ R     A     R+ L+L RP
Sbjct: 105 GLCGRAGTGEKRKWER-PGKETWKPKTRRPRLRA----PRAALLLPRP 147


>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 37/117 (31%), Positives = 44/117 (37%), Gaps = 23/117 (19%)

Query: 60  RGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPA- 118
           RG  AR  PAA     R        G  G G  +  S   GG         G  RPW A 
Sbjct: 186 RGNHARK-PAALPVPGRFPIRPVLGGRSGPGDRSLRSAHLGGA--------GQGRPWTAR 236

Query: 119 PPPRAHWPPRPR-----PASSLAVGLR----GRSVLILWRPIP----DRKACATPRW 162
           PPP  H  PRP+     P ++  +G R      S   +W   P     R+ CAT  W
Sbjct: 237 PPPIPHTRPRPKCACSTPGTNRNLGPRVAGANHSASGVWAVSPRVTRARRGCATRSW 293


>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
          Length = 237

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 69  AAGMGAR-RVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARGDPRPWPAPPPRAHWPP 127
           A G G R   R+  A A   G      AS +R       RRA  DP P PAPPP     P
Sbjct: 88  AQGRGCRGHFRSLPAAASRSGSRTLRCASSDRSLREQKQRRAGPDPTPSPAPPPAG---P 144

Query: 128 RPRPAS 133
           RP P S
Sbjct: 145 RPSPGS 150


>gi|4504713 insulinoma-associated 1 [Homo sapiens]
          Length = 510

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 66  PWPAAGMGARRVR-AEGARAGG--GGDGYA-APASCERGGGFHCGRRARGDPRPWPA-PP 120
           P PAA +G      A GA  GG  GGD    APA  + G  F  G  A   P P P  PP
Sbjct: 132 PTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAARGPGPGPPLPP 191

Query: 121 PRAHWPPRPRP 131
             A  PP  RP
Sbjct: 192 AAALRPPGKRP 202


>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 344

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 58  TVRGGRARPWPAAGMGA------RRVRAEGARAGGGGD-GYAAPASCERGGGFHCGRRA- 109
           ++R  RA+PWP+    A      RR R  G RA    + G        +G   H  R A 
Sbjct: 198 SLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAG 257

Query: 110 -----RGDPRPWPAPPPRAHWPPRPRPAS 133
                R  PR  PA   RA   PRP PAS
Sbjct: 258 LARAPRARPRD-PAGVSRAPPRPRPHPAS 285


>gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo
           sapiens]
          Length = 205

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 50  IAAEPQRDTVRGGRARPWPAAGM---GARRVRAEGARAGGGG-DGYAAPASCE-----RG 100
           +   PQ  + +    RP P  GM   G+ RV        GGG D  AAP  C      RG
Sbjct: 20  VKPRPQGPSRKSRLGRPDPTHGMRSPGSHRVPGSVLGVQGGGEDRKAAPRGCSAAGEARG 79

Query: 101 GGFHCGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACA 158
            GF     +R    P P   P A    R +P + L+V    R     + P    ++CA
Sbjct: 80  SGFTRQALSRSPAEPGPGAQPAA---LRSQPGTWLSVSRPRRDSPEGYPPETPEESCA 134


>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 344

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 58  TVRGGRARPWPAAGMGA------RRVRAEGARAGGGGD-GYAAPASCERGGGFHCGRRA- 109
           ++R  RA+PWP+    A      RR R  G RA    + G        +G   H  R A 
Sbjct: 198 SLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAG 257

Query: 110 -----RGDPRPWPAPPPRAHWPPRPRPAS 133
                R  PR  PA   RA   PRP PAS
Sbjct: 258 LARAPRARPRD-PAGVSRAPPRPRPHPAS 285


>gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo
           sapiens]
          Length = 205

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 50  IAAEPQRDTVRGGRARPWPAAGM---GARRVRAEGARAGGGG-DGYAAPASCE-----RG 100
           +   PQ  + +    RP P  GM   G+ RV        GGG D  AAP  C      RG
Sbjct: 20  VKPRPQGPSRKSRLGRPDPTHGMRSPGSHRVPGSVLGVQGGGEDRKAAPRGCSAAGEARG 79

Query: 101 GGFHCGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACA 158
            GF     +R    P P   P A    R +P + L+V    R     + P    ++CA
Sbjct: 80  SGFTRQALSRSPAEPGPGAQPAA---LRSQPGTWLSVSRPRRDSPEGYPPETPEESCA 134


>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
           sapiens]
          Length = 344

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 58  TVRGGRARPWPAAGMGA------RRVRAEGARAGGGGD-GYAAPASCERGGGFHCGRRA- 109
           ++R  RA+PWP+    A      RR R  G RA    + G        +G   H  R A 
Sbjct: 198 SLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAG 257

Query: 110 -----RGDPRPWPAPPPRAHWPPRPRPAS 133
                R  PR  PA   RA   PRP PAS
Sbjct: 258 LARAPRARPRD-PAGVSRAPPRPRPHPAS 285


>gi|239742971 PREDICTED: hypothetical protein XP_002342727 [Homo
           sapiens]
          Length = 205

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 50  IAAEPQRDTVRGGRARPWPAAGM---GARRVRAEGARAGGGG-DGYAAPASCE-----RG 100
           +   PQ  + +    RP P  GM   G+ RV        GGG D  AAP  C      RG
Sbjct: 20  VKPRPQGPSRKSRLGRPDPTHGMRSPGSHRVPGSVLGVQGGGEDRKAAPRGCSAAGEARG 79

Query: 101 GGFHCGRRARGDPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACA 158
            GF     +R    P P   P A    R +P + L+V    R     + P    ++CA
Sbjct: 80  SGFTRQALSRSPAEPGPGAQPAA---LRSQPGTWLSVSRPRRDSPEGYPPETPEESCA 134


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 23/109 (21%)

Query: 59  VRGGRARPWPAAGMGARRVRAEGARAGG-------GGDGYAAPASCERGGGFHCGRRARG 111
           +R   ARP PA G GA   RA  +RA G       GG+  AAP +   GGG + G   R 
Sbjct: 235 LRSRAARPPPAPGPGALS-RASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRA 293

Query: 112 DPRPWPAPPPRAHWPPRPRPASSLAVGLRGRSVLILWRPIPDRKACATP 160
                 APP RA            A GL G + + L R   DR   + P
Sbjct: 294 ------APPSRARQD---------AWGLSGCATVGLRRGDCDRAGSSQP 327


>gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]
          Length = 346

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 25/90 (27%)

Query: 73  GARRVRAEGARAGG--GGDGYAAPASCERGGG-------FHCGRRARG-----DPRPWPA 118
           G  R RAE    GG  GG G+A  A C    G       +    RARG     +PR  P 
Sbjct: 20  GGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPL 79

Query: 119 PPPRAHWPPRPRP--------ASSLAVGLR 140
           PPP    PP P P        +SSL  GLR
Sbjct: 80  PPPA---PPLPPPGALDALSLSSSLDSGLR 106



 Score = 29.6 bits (65), Expect = 1.2
 Identities = 30/88 (34%), Positives = 32/88 (36%), Gaps = 12/88 (13%)

Query: 52  AEPQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCERGGGFHCGRRARG 111
           AEPQ    RGG     P AG   R          G GD      S  R  G    +  R 
Sbjct: 26  AEPQPRGGRGGGCGWAPFAGCSTR---------DGDGDEEEYYGSEPRARGLAGDKEPRA 76

Query: 112 DPRPWPAPPPRAHWPPRPRPASSLAVGL 139
            P P PAPP     PP    A SL+  L
Sbjct: 77  GPLPPPAPPLP---PPGALDALSLSSSL 101


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 16/96 (16%)

Query: 51  AAEPQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGGDGY----AAPASCERGGGFHCG 106
           A EP +    G  A    A+G       A G  AGGGG GY     +P      GG+  G
Sbjct: 343 AGEPSKAGPSGATAG---ASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGY--G 397

Query: 107 RRARGDPRPWPAPPPRAHWPPRPR----PASSLAVG 138
             A G  RP   PPPR+   P+ +    PA++ A G
Sbjct: 398 AAAGGATRP---PPPRSTATPKCQSLGGPAAAYATG 430


>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 365

 Score = 34.7 bits (78), Expect = 0.039
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 108 RARGDPRPW-----PAPPPRAHWPPRPRPASSLAVGLRGR 142
           R+RG+PRP      P PPP A  PP P    + A  LRGR
Sbjct: 302 RSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGR 341


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 34.3 bits (77), Expect = 0.050
 Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 51  AAEPQRDTVRGGRARPWPAAGMGARRVRAEGARAGGGGDGYAAPASCE------RGGG-- 102
           AA   R      RA P PAA   A R     A +GG G G     S +      R GG  
Sbjct: 122 AAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQP 181

Query: 103 --FHCGRRARGDPRPWPAPPPRAHWPPRPRPAS 133
               C RR R  PR    P  R   P + RP S
Sbjct: 182 PPLTC-RRCRAAPRRSARPFRRPGLPLKSRPGS 213


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.470 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,814,205
Number of Sequences: 37866
Number of extensions: 589459
Number of successful extensions: 6050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 5102
Number of HSP's gapped (non-prelim): 1240
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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