Guide to the Human Genome
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Search of human proteins with 239756458

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756458 PREDICTED: similar to ZNF668 protein [Homo
sapiens]
         (377 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]      793   0.0  
gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo ...   793   0.0  
gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo ...   793   0.0  
gi|239757367 PREDICTED: hypothetical protein [Homo sapiens]            76   6e-14
gi|239751919 PREDICTED: hypothetical protein XP_002348040 [Homo ...    76   6e-14
gi|239746409 PREDICTED: hypothetical protein XP_002343743 [Homo ...    76   6e-14
gi|239754259 PREDICTED: hypothetical protein XP_002345937 [Homo ...    65   1e-10
gi|239748797 PREDICTED: hypothetical protein XP_002346805 [Homo ...    65   1e-10
gi|239742834 PREDICTED: hypothetical protein XP_002342675 [Homo ...    65   1e-10
gi|239751880 PREDICTED: hypothetical protein XP_002348020 [Homo ...    49   6e-06
gi|239746369 PREDICTED: hypothetical protein XP_002343699 [Homo ...    49   6e-06
gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo ...    48   1e-05
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    44   2e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        40   0.003
gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo ...    39   0.006
gi|145309315 G protein-coupled receptor 62 [Homo sapiens]              34   0.25 
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]            31   2.1  
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]            31   2.1  
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]            31   2.1  
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    31   2.1  
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              31   2.1  
gi|156104862 ankyrin repeat domain 38 [Homo sapiens]                   31   2.1  
gi|229892328 IQ motif containing C isoform 1 [Homo sapiens]            30   2.7  
gi|229892326 IQ motif containing C isoform 2 [Homo sapiens]            30   2.7  
gi|124107616 claudin 23 [Homo sapiens]                                 30   3.6  
gi|169168601 PREDICTED: hypothetical protein [Homo sapiens]            30   4.6  
gi|169169523 PREDICTED: hypothetical protein [Homo sapiens]            30   4.6  
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]             30   4.6  
gi|16306552 semaphorin Y [Homo sapiens]                                30   4.6  
gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ...    29   6.1  

>gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]
          Length = 377

 Score =  793 bits (2049), Expect = 0.0
 Identities = 377/377 (100%), Positives = 377/377 (100%)

Query: 1   MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 60
           MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH
Sbjct: 1   MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 60

Query: 61  LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 120
           LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH
Sbjct: 61  LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 120

Query: 121 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 180
           KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR
Sbjct: 121 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 180

Query: 181 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 240
           PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE
Sbjct: 181 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 240

Query: 241 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 300
           LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG
Sbjct: 241 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 300

Query: 301 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 360
           RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC
Sbjct: 301 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 360

Query: 361 GSWAGIWMCARTILILW 377
           GSWAGIWMCARTILILW
Sbjct: 361 GSWAGIWMCARTILILW 377


>gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo
           sapiens]
          Length = 377

 Score =  793 bits (2049), Expect = 0.0
 Identities = 377/377 (100%), Positives = 377/377 (100%)

Query: 1   MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 60
           MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH
Sbjct: 1   MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 60

Query: 61  LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 120
           LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH
Sbjct: 61  LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 120

Query: 121 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 180
           KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR
Sbjct: 121 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 180

Query: 181 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 240
           PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE
Sbjct: 181 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 240

Query: 241 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 300
           LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG
Sbjct: 241 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 300

Query: 301 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 360
           RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC
Sbjct: 301 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 360

Query: 361 GSWAGIWMCARTILILW 377
           GSWAGIWMCARTILILW
Sbjct: 361 GSWAGIWMCARTILILW 377


>gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo
           sapiens]
          Length = 417

 Score =  793 bits (2049), Expect = 0.0
 Identities = 377/377 (100%), Positives = 377/377 (100%)

Query: 1   MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 60
           MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH
Sbjct: 41  MRDEVRALLEALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGH 100

Query: 61  LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 120
           LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH
Sbjct: 101 LCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVH 160

Query: 121 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 180
           KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR
Sbjct: 161 KNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPR 220

Query: 181 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 240
           PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE
Sbjct: 221 PDRGRQSLLPGKETQDMTLRMLGCGKETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQE 280

Query: 241 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 300
           LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG
Sbjct: 281 LLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAELPEALAAGFGIPAILMLG 340

Query: 301 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 360
           RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC
Sbjct: 341 RFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQPGPQNLYFQSPRGIPC 400

Query: 361 GSWAGIWMCARTILILW 377
           GSWAGIWMCARTILILW
Sbjct: 401 GSWAGIWMCARTILILW 417


>gi|239757367 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 48/105 (45%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 206 KETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAEL 265
           ++ +  LHQG  LL A RVL  HP  DL  Q  QELLQHQQLQ LLLG +L  QP AA+L
Sbjct: 29  QDISEALHQGGCLLAALRVLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQL 88

Query: 266 PELAEGLMRPMHIPVAELPEALAAGFGI---PAILMLGRFLFPGG 307
            +  +GL+ P  + V + PE  A    +   P    LG FL   G
Sbjct: 89  MQPGQGLVGPGSLLVDKFPETQAGELQVSRGPLRDGLGFFLLDSG 133


>gi|239751919 PREDICTED: hypothetical protein XP_002348040 [Homo
           sapiens]
          Length = 134

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 48/105 (45%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 206 KETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAEL 265
           ++ +  LHQG  LL A RVL  HP  DL  Q  QELLQHQQLQ LLLG +L  QP AA+L
Sbjct: 29  QDISEALHQGGCLLAALRVLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQL 88

Query: 266 PELAEGLMRPMHIPVAELPEALAAGFGI---PAILMLGRFLFPGG 307
            +  +GL+ P  + V + PE  A    +   P    LG FL   G
Sbjct: 89  MQPGQGLVGPGSLLVDKFPETQAGELQVSRGPLRDGLGFFLLDSG 133


>gi|239746409 PREDICTED: hypothetical protein XP_002343743 [Homo
           sapiens]
          Length = 134

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 48/105 (45%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 206 KETNMVLHQGDSLLTASRVLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAEL 265
           ++ +  LHQG  LL A RVL  HP  DL  Q  QELLQHQQLQ LLLG +L  QP AA+L
Sbjct: 29  QDISEALHQGGCLLAALRVLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQL 88

Query: 266 PELAEGLMRPMHIPVAELPEALAAGFGI---PAILMLGRFLFPGG 307
            +  +GL+ P  + V + PE  A    +   P    LG FL   G
Sbjct: 89  MQPGQGLVGPGSLLVDKFPETQAGELQVSRGPLRDGLGFFLLDSG 133


>gi|239754259 PREDICTED: hypothetical protein XP_002345937 [Homo
           sapiens]
          Length = 105

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 224 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 283
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 284 PEALA 288
            EALA
Sbjct: 61  SEALA 65


>gi|239748797 PREDICTED: hypothetical protein XP_002346805 [Homo
           sapiens]
          Length = 105

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 224 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 283
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 284 PEALA 288
            EALA
Sbjct: 61  SEALA 65


>gi|239742834 PREDICTED: hypothetical protein XP_002342675 [Homo
           sapiens]
          Length = 105

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 224 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 283
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 284 PEALA 288
            EALA
Sbjct: 61  SEALA 65


>gi|239751880 PREDICTED: hypothetical protein XP_002348020 [Homo
           sapiens]
          Length = 146

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 30/69 (43%)

Query: 35  GFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSA 94
           G SP CT WW   S   RK   HSG   G  P  +  CR R   + K  P     CGFS+
Sbjct: 75  GRSPECTRWWCASSPASRKRRGHSGQRKGRRPAWMLQCRRRWLERLKVLPQTLHWCGFSS 134

Query: 95  ARSRNWRRR 103
                WR R
Sbjct: 135 ECEMLWRSR 143



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 30/85 (35%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 21  PLTGVH--TPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEP 78
           P +G H  TPM      F+      WR       K     GH  G SP C RW  A S  
Sbjct: 37  PGSGAHRGTPMASGCLRFA------WRRSVLASVKRSRQMGHWYGRSPECTRWWCASSPA 90

Query: 79  QRKRFPHCPQLCGFSAARSRNWRRR 103
            RKR  H  Q  G   A     RRR
Sbjct: 91  SRKRRGHSGQRKGRRPAWMLQCRRR 115


>gi|239746369 PREDICTED: hypothetical protein XP_002343699 [Homo
           sapiens]
          Length = 146

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 30/69 (43%)

Query: 35  GFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSA 94
           G SP CT WW   S   RK   HSG   G  P  +  CR R   + K  P     CGFS+
Sbjct: 75  GRSPECTRWWCASSPASRKRRGHSGQRKGRRPAWMLQCRRRWLERLKVLPQTLHWCGFSS 134

Query: 95  ARSRNWRRR 103
                WR R
Sbjct: 135 ECEMLWRSR 143



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 30/85 (35%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 21  PLTGVH--TPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEP 78
           P +G H  TPM      F+      WR       K     GH  G SP C RW  A S  
Sbjct: 37  PGSGAHRGTPMASGCLRFA------WRRSVLASVKRSRQMGHWYGRSPECTRWWCASSPA 90

Query: 79  QRKRFPHCPQLCGFSAARSRNWRRR 103
            RKR  H  Q  G   A     RRR
Sbjct: 91  SRKRRGHSGQRKGRRPAWMLQCRRR 115


>gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo
           sapiens]
          Length = 522

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 32  QEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFS------PVCVRWCRARSEPQRKRFPH 85
           Q KG SPVCT W   R E   KLL  +    G S      PVC RW  A  E + K  PH
Sbjct: 323 QRKGRSPVCTRWCCRRLEVCAKLLPQTPQAWGLSPVKARRPVCTRWWMASREERLKALPH 382

Query: 86  CP 87
            P
Sbjct: 383 SP 384



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 24/52 (46%), Positives = 27/52 (51%)

Query: 47  RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQLCGFSAARSR 98
           R EE  K+L  SG   G SPVC RWC  R E   K  P  PQ  G S  ++R
Sbjct: 310 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLEVCAKLLPQTPQAWGLSPVKAR 361



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 44  WR----TRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQL 89
           WR    +R EE  K+L  SG   G SPVC RWC  R     K FP  PQ+
Sbjct: 473 WRCRCSSRLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQV 522



 Score = 33.1 bits (74), Expect = 0.42
 Identities = 14/27 (51%), Positives = 14/27 (51%)

Query: 34  KGFSPVCTPWWRTRSEELRKLLSHSGH 60
           K   PVCT WW    EE  K L HS H
Sbjct: 359 KARRPVCTRWWMASREERLKALPHSPH 385


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 47/168 (27%), Positives = 58/168 (34%), Gaps = 32/168 (19%)

Query: 4   EVRALLEALVALSAAEGPLTGVHTPMVQQE--------------KGFSPVCTPWWRTRSE 49
           +V AL EAL A S   GPL GVH  +  Q               K   PVCT  W    E
Sbjct: 782 QVGALREALPADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRARMKARRPVCTLRWICSRE 841

Query: 50  ELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQ--LCGFSAARSRNWRRRGNAG 107
           E  K L  SGH          W R   +  R   PH P       + A    +    +A 
Sbjct: 842 ERLKALGQSGH----------WSR---DDHRNDLPHSPHSYWAAGAGAAGPGFSPAPSAV 888

Query: 108 DKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSP 155
           +         T+   GG+L       L +  P P     G  +G G P
Sbjct: 889 EAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP---THGLFKGQGLP 933



 Score = 37.0 bits (84), Expect = 0.029
 Identities = 18/34 (52%), Positives = 20/34 (58%)

Query: 47  RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQR 80
           R EE  K+L  SG   G SPVC RWC  R E +R
Sbjct: 390 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLEARR 423


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 44/131 (33%), Positives = 53/131 (40%), Gaps = 14/131 (10%)

Query: 26  HTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPV------CVRWCRARSEPQ 79
           HTP  +  +  SP      R+RS    K     GH    SP         RW R+RS PQ
Sbjct: 475 HTPSRRMGRSRSPATAKRGRSRSRTPTK----RGHSRSRSPQWRRSRSAQRWGRSRS-PQ 529

Query: 80  RKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRP 139
           R+     PQ  G+S  RSRN +RRG +   AR   SHS      G   +      G  R 
Sbjct: 530 RRGRSRSPQRPGWS--RSRNTQRRGRS-RSARRGRSHSRSPATRGRSRSRTPARRGRSRS 586

Query: 140 PPCPHRRGRPR 150
                RR R R
Sbjct: 587 RTPARRRSRSR 597


>gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo
           sapiens]
          Length = 564

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 21/42 (50%), Positives = 22/42 (52%)

Query: 47  RSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCPQ 88
           R EE  K+L  SG   G SPVC RWC  R     K FP  PQ
Sbjct: 390 RLEEWVKVLGQSGQRKGRSPVCTRWCCRRLVLCVKLFPQTPQ 431



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 34/130 (26%), Positives = 43/130 (33%), Gaps = 18/130 (13%)

Query: 28  PMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVRWCRARSEPQRKRFPHCP 87
           P   Q K   PVCT  W    EE  K L  SGH          W R   +  R   PH P
Sbjct: 440 PHWPQMKARRPVCTLRWICSREERLKALGQSGH----------WSR---DDHRNDLPHSP 486

Query: 88  Q--LCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHR 145
                  + A    +    +A +         T+   GG+L       L +  P P    
Sbjct: 487 HSYWAAGAGAAGPGFSPAPSAVEAGAMSAWEPTITPGGGILGQRLTPALDHLNPKP---T 543

Query: 146 RGRPRGLGSP 155
            G  +G G P
Sbjct: 544 HGLFKGQGLP 553


>gi|145309315 G protein-coupled receptor 62 [Homo sapiens]
          Length = 368

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 17/97 (17%)

Query: 251 LLGTQLGPQPAAAELPELAEGL--MRPMHIPVAELPEALAAGFGIPAILMLGRFLFPGGI 308
           LLGT   P PA A    LA GL   RP+   +A         F +PA+L+LG +   GGI
Sbjct: 148 LLGTPPAPPPAPARCSVLAGGLGPFRPLWALLA---------FALPALLLLGAY---GGI 195

Query: 309 FHFHNQKPFSLPRGLVLGLQGGCHSPGLRLRVGRLQP 345
           F    +     PR          HS  L  R+  L P
Sbjct: 196 FVVARRAALRPPRP---ARGSRLHSDSLDSRLSILPP 229


>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)

Query: 10  EALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHL 61
           EAL+AL+ AEG L GVH  +V Q            R   E L  L +H G L
Sbjct: 209 EALLALATAEGLLAGVHAQVVHQV-----------RVTPEALPALAAHVGPL 249


>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)

Query: 10  EALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHL 61
           EAL+AL+ AEG L GVH  +V Q            R   E L  L +H G L
Sbjct: 209 EALLALATAEGLLAGVHAQVVHQV-----------RVTPEALPALAAHVGPL 249


>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)

Query: 10  EALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHL 61
           EAL+AL+ AEG L GVH  +V Q            R   E L  L +H G L
Sbjct: 209 EALLALATAEGLLAGVHAQVVHQV-----------RVTPEALPALAAHVGPL 249


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 45/175 (25%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 11  ALVALSAAEGPLTGVHTPMVQQEKGFSPVCTPWWRTRSEELRKLLSHSGHLCGFSPVCVR 70
           A  A +AA G  TG   P   Q  G +P        R+   R+  S S      S     
Sbjct: 341 AAAAAAAASGVTTG-KPPAPPQPGGPAP-------GRNASARRRSSSSSSSSSASRTSSS 392

Query: 71  WCRARSEPQRKRFPHCPQLCGFSAARSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMA 130
              +RS  + +R     +    + +RSR+W R  +   +     S    H  GG      
Sbjct: 393 RSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHR 452

Query: 131 VLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISPRPDRGR 185
                 RR    P RR R R         G R LR H   R+ +   S  P R R
Sbjct: 453 YSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSW-SLSPSRSR 506


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 18/94 (19%)

Query: 103 RGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHRRG--RPRGLGSPACSLG 160
           RG+    + +  S +   ++ G L+  +V L   +RPPP P R      RGL  P   LG
Sbjct: 461 RGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGPLG 520

Query: 161 FRLLRGHILCRNHNMLISPRPDRGRQSLLPGKET 194
                           + P+P+R +Q  LP   T
Sbjct: 521 ----------------LPPKPERKQQPQLPRPPT 538


>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
          Length = 995

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 11/60 (18%)

Query: 184 GRQSLLPG--KETQDMTLRMLGCGKETNMVLHQGDSLLTAS---------RVLLTHPALD 232
           G+ +L+ G   + +DM   +L C  + N+  H G S L  +         R+LL HPA D
Sbjct: 896 GQTALMLGVSHDREDMVQALLSCQADVNLQDHDGSSALMVACHHGNVDLVRLLLAHPACD 955


>gi|229892328 IQ motif containing C isoform 1 [Homo sapiens]
          Length = 546

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 29/159 (18%)

Query: 120 HKNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISP 179
           H++ G L      + G +   PC  + G P  + S + +LG RL +G             
Sbjct: 335 HRSPGSLATTQKNIAGAKCREPCYSKSGPPSSIPSNSQALGDRLTKG------------- 381

Query: 180 RPDRGRQS-----LLPGKETQDMTLRML----GCGKETN---MVLHQGDSLLTASRVLLT 227
            PD GRQ+     LL  K  +D T R L     C +++      L++  ++   S   L 
Sbjct: 382 -PDDGRQTFGGTCLLQMKILEDQTPRGLKPRNHCPRKSRTQLSALYEDSNIKEMSPRKLD 440

Query: 228 HPALDLPWQHCQEL-LQHQQLQDLLLGTQLGPQPAAAEL 265
           H   D      QEL L    +  +  GT  GP+ +  +L
Sbjct: 441 HKEPDCRTVRTQELGLSEDHI--IWDGTLGGPEHSVLDL 477


>gi|229892326 IQ motif containing C isoform 2 [Homo sapiens]
          Length = 466

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 29/159 (18%)

Query: 120 HKNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGLGSPACSLGFRLLRGHILCRNHNMLISP 179
           H++ G L      + G +   PC  + G P  + S + +LG RL +G             
Sbjct: 255 HRSPGSLATTQKNIAGAKCREPCYSKSGPPSSIPSNSQALGDRLTKG------------- 301

Query: 180 RPDRGRQS-----LLPGKETQDMTLRML----GCGKETN---MVLHQGDSLLTASRVLLT 227
            PD GRQ+     LL  K  +D T R L     C +++      L++  ++   S   L 
Sbjct: 302 -PDDGRQTFGGTCLLQMKILEDQTPRGLKPRNHCPRKSRTQLSALYEDSNIKEMSPRKLD 360

Query: 228 HPALDLPWQHCQEL-LQHQQLQDLLLGTQLGPQPAAAEL 265
           H   D      QEL L    +  +  GT  GP+ +  +L
Sbjct: 361 HKEPDCRTVRTQELGLSEDHI--IWDGTLGGPEHSVLDL 397


>gi|124107616 claudin 23 [Homo sapiens]
          Length = 292

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 96  RSRNWRRRGNAGDKARSLPSHSTVHKNGGLLTAMAVLLLGNRRPPPCPHRRGRPR 150
           R R  R+  +AG +  S+ +         L  A+     G  RPPP  HR+ +P+
Sbjct: 188 RCRRRRKGPSAGPRRSSVSTIQVEWPEPDLAPAIKYYSDGQHRPPPAQHRKPKPK 242


>gi|169168601 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 154

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 13/125 (10%)

Query: 119 VHKNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGL-GSPACSLGFRLLRGHILCRNHNMLI 177
           +H N  L++        +R  P C   R RP     S A S  FRLL            +
Sbjct: 40  IHPNRSLISLCGSPGPPSRPEPKCLGSRERPVPFFSSLATSSHFRLLT-----------V 88

Query: 178 SPRPDRGRQSLLPGKETQDMTLRMLGCGKETNM-VLHQGDSLLTASRVLLTHPALDLPWQ 236
             +P +  + L PG E ++   +  G   + ++ +L     LL++  ++ THP L +  +
Sbjct: 89  PKQPPKTLRELGPGPEAENGRKKRSGRFIKLSLQILQYRHCLLSSLWMVCTHPCLQVFRK 148

Query: 237 HCQEL 241
           + QEL
Sbjct: 149 NAQEL 153


>gi|169169523 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 154

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 13/125 (10%)

Query: 119 VHKNGGLLTAMAVLLLGNRRPPPCPHRRGRPRGL-GSPACSLGFRLLRGHILCRNHNMLI 177
           +H N  L++        +R  P C   R RP     S A S  FRLL            +
Sbjct: 40  IHPNRSLISLCGSPGPPSRPEPKCLGSRERPVPFFSSLATSSHFRLLT-----------V 88

Query: 178 SPRPDRGRQSLLPGKETQDMTLRMLGCGKETNM-VLHQGDSLLTASRVLLTHPALDLPWQ 236
             +P +  + L PG E ++   +  G   + ++ +L     LL++  ++ THP L +  +
Sbjct: 89  PKQPPKTLRELGPGPEAENGRKKRSGRFIKLSLQILQYRHCLLSSLWMVCTHPCLQVFRK 148

Query: 237 HCQEL 241
           + QEL
Sbjct: 149 NAQEL 153


>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
          Length = 1222

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 38  PVCTPWWRTRSEELRKLLSHSGH 60
           P+C  W RT +E  +K LS  GH
Sbjct: 836 PICAKWTRTEAEGSKKSLSSEGH 858


>gi|16306552 semaphorin Y [Homo sapiens]
          Length = 930

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 239 QELLQHQQLQDLLLGTQLGPQPAA----AELPELAEGLMRPMHIPVAELPEALAAGFGIP 294
           QE ++H   QD   G+Q GP  +A     +LP  +     P+ + +A +  A A G  + 
Sbjct: 562 QESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLLLASVAAAFALGASVS 621

Query: 295 AILM 298
            +L+
Sbjct: 622 GLLV 625


>gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo
           sapiens]
          Length = 477

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 298 MLGRFLFPGGIFHFHNQKPFSLPRGLVLGLQGGCHSPG 335
           +LG+FL    ++ F   K F LP+ L LGL   C SPG
Sbjct: 230 LLGQFLVMP-LYAFLMAKVFMLPKALALGLIITCSSPG 266


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.141    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,787,425
Number of Sequences: 37866
Number of extensions: 988552
Number of successful extensions: 3275
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3208
Number of HSP's gapped (non-prelim): 74
length of query: 377
length of database: 18,247,518
effective HSP length: 104
effective length of query: 273
effective length of database: 14,309,454
effective search space: 3906480942
effective search space used: 3906480942
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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