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Search of human proteins with 239755981
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
(307 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 632 0.0
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 613 e-176
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 613 e-176
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 55 6e-08
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 51 1e-06
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 50 2e-06
gi|119395716 forkhead box C1 [Homo sapiens] 50 2e-06
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 3e-06
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 48 1e-05
gi|126090909 engrailed homeobox 1 [Homo sapiens] 47 2e-05
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 47 2e-05
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 47 3e-05
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 47 3e-05
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 47 3e-05
gi|21361699 sphingosine kinase 2 [Homo sapiens] 46 4e-05
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 46 4e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 46 4e-05
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 46 5e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 45 8e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 8e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 8e-05
gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] 45 8e-05
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 44 2e-04
gi|33286436 gametogenetin [Homo sapiens] 44 2e-04
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 632 bits (1629), Expect = 0.0
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MPNLLYEWTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGT 60
MPNLLYEWTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGT
Sbjct: 1 MPNLLYEWTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGT 60
Query: 61 QPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPS 120
QPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPS
Sbjct: 61 QPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPS 120
Query: 121 AAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 180
AAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG
Sbjct: 121 AAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 180
Query: 181 HGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGD 240
HGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGD
Sbjct: 181 HGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGD 240
Query: 241 TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGK 300
TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGK
Sbjct: 241 TPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGK 300
Query: 301 EDAAGAG 307
EDAAGAG
Sbjct: 301 EDAAGAG 307
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 613 bits (1580), Expect = e-176
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 9 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 68
TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL
Sbjct: 27 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 86
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 128
AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR
Sbjct: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 146
Query: 129 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 188
KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ
Sbjct: 147 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 206
Query: 189 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 248
GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH
Sbjct: 207 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 266
Query: 249 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 307
HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG
Sbjct: 267 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 325
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 613 bits (1580), Expect = e-176
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 9 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 68
TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL
Sbjct: 27 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 86
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 128
AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR
Sbjct: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 146
Query: 129 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 188
KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ
Sbjct: 147 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 206
Query: 189 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 248
GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH
Sbjct: 207 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 266
Query: 249 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 307
HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG
Sbjct: 267 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 325
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 55.5 bits (132), Expect = 6e-08
Identities = 70/266 (26%), Positives = 98/266 (36%), Gaps = 47/266 (17%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSP-PPLHITPVLPPTFP--------------- 58
P P+ ++ R HT H T HP S+ PP H LPPT
Sbjct: 59 PEKPSRSYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHTRRKRKKEKTSAP 118
Query: 59 ---GTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG 115
GT P + A E ++EE ++ P+ PP G +GS
Sbjct: 119 PSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPP---PSGTPQKAKFSIGSDEDDS 175
Query: 116 PGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGS 175
PGLP AA + + P + +SP +SS+ PR RL G RP SP+
Sbjct: 176 PGLPGRAAV--TKPLPSVGPHTDKSPQHSSSS---PSPRARASRLAGEKSRPWSPSASYD 230
Query: 176 RRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYR 235
R+ A G+PGG Q++ EA ++ S ++ H
Sbjct: 231 LRER-------------LCPGSALGNPGGP--EQQVPTDEAEAQMLGSADLDDMKSHRLE 275
Query: 236 RPAGDTPDPRRGHHRHRRRQRGGGRG 261
D P RR H + + GGRG
Sbjct: 276 ----DNPGVRR-HLVKKPSRTQGGRG 296
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 51.2 bits (121), Expect = 1e-06
Identities = 48/167 (28%), Positives = 65/167 (38%), Gaps = 21/167 (12%)
Query: 16 ANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEG 75
A+ AP PR R P T P + P P P ++ R R G
Sbjct: 106 ASTAPPRHPRPRRPGGPALRPTPRPCAGPAPP----------PASRDCRCRRPRRWPRAG 155
Query: 76 KQEEGRRAQA-RPRPLRPPWEVRGGA----RGPCSAPVGSRASSGPGLPSAAAARPARKT 130
++ GRRA A +P W RG R C+ G+R + P P+ A+ A +
Sbjct: 156 RR--GRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPA-PTCASPSAAASS 212
Query: 131 LTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRR 177
+ R+ SP TA S CG+GP G+P S A G R
Sbjct: 213 CCRRRRACSSPTTAWSGACGAGPTAATA---AQPGKPRSAAAPGRAR 256
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 50.4 bits (119), Expect = 2e-06
Identities = 49/146 (33%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 33 TPHATAHP-PSSPPPLHITPVL-PPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPL 90
TPH + P PSSPPP +L PP P A R A GE +E + PRP
Sbjct: 456 TPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFFGTEGPPRPA 515
Query: 91 RPPWEVRGGARGPCSA--PVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAG 148
PP R G GP ++ VG++ S P P T S ++S AG
Sbjct: 516 PPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPT--------TSSSNSNSGSHSSSPAG 567
Query: 149 CGSGPRVPQV-RLLGPGGRPSSPARD 173
S P P + R + P RP SPA++
Sbjct: 568 PVSFPPPPYLARSIDPLPRPPSPAQN 593
Score = 42.0 bits (97), Expect = 7e-04
Identities = 60/266 (22%), Positives = 84/266 (31%), Gaps = 35/266 (13%)
Query: 40 PPSSPPPLHITPVLPPTFPGTQPP----------RALRLAEGSGEGKQEEGRRAQARPRP 89
PP+ PPP + PP+ P PP + EG + G RP P
Sbjct: 772 PPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPGP 831
Query: 90 LRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGC 149
L G G + P S A S G P +A+ ++ + + P + E A
Sbjct: 832 LPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPVPG 891
Query: 150 GSGPRVPQVRLLGPGGRPSSPARDGSRR-------KAGHGCTSQSQGDAVAMEAEARGSP 202
P P L P R S + R + G T + A A++
Sbjct: 892 PMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATDPADPVDTAEPADSG--- 948
Query: 203 GGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGG 262
E L P +A VAAV +G ++ H + RR R +
Sbjct: 949 ------TERLLPPAQAKEEAGGVAAV---------SGSCKRRQKEHQKEHRRHRRACKDS 993
Query: 263 GGRGGREAAATVHGNAAASSSAAARG 288
GR RE A S G
Sbjct: 994 VGRRPREGRAKAKAKVPKEKSRRVLG 1019
Score = 30.8 bits (68), Expect = 1.6
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 10/52 (19%)
Query: 19 APFHTPRKRHPLSH-----TPHATAHPPSSPPPLHITPVLPPTFPGTQPPRA 65
AP +RH L H P TAHPP + P PP PG +PP A
Sbjct: 298 APPERQEQRHSLPHPYPYPAPAYTAHPPGH----RLVPAAPPG-PGPRPPGA 344
Score = 29.3 bits (64), Expect = 4.6
Identities = 36/125 (28%), Positives = 40/125 (32%), Gaps = 24/125 (19%)
Query: 40 PPSSPPPLHITPVLPPTFPG--TQPPRAL------RLAEGSGEGKQEEGRRAQARPRPLR 91
PP PPP P PP PG T PP L G G + +G R
Sbjct: 248 PPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQ---- 303
Query: 92 PPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGS 151
E R P P + + PG AA P PR P A S GC
Sbjct: 304 ---EQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGP-----GPR----PPGAESHGCLP 351
Query: 152 GPRVP 156
R P
Sbjct: 352 ATRPP 356
Score = 29.3 bits (64), Expect = 4.6
Identities = 39/133 (29%), Positives = 49/133 (36%), Gaps = 25/133 (18%)
Query: 15 PANPAPFHTP----RKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAE 70
PA P F P R PL P + A P PP + +T LPP PP +
Sbjct: 565 PAGPVSFPPPPYLARSIDPLPRPP-SPAQNPQDPPLVPLTLALPPA-----PPSSCH-QN 617
Query: 71 GSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKT 130
SG ++ E RPR P G GP P G + + +P PAR
Sbjct: 618 TSGSFRRPE----SPRPRVSFPKTPEVG--PGP---PPGPLSKAPQPVPPGVGELPAR-- 666
Query: 131 LTCQPRSIESPAT 143
PR + P T
Sbjct: 667 ---GPRLFDFPPT 676
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 50.4 bits (119), Expect = 2e-06
Identities = 61/212 (28%), Positives = 77/212 (36%), Gaps = 16/212 (7%)
Query: 86 RPRPLRPPWEVRGGARGPCSAPVGSR-------ASSGPGLPSAAAARPARKTLTCQPRSI 138
R P PP + G A GP PV + P P + AA + P+ I
Sbjct: 199 RQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPK-I 257
Query: 139 ESP-ATASSAGCGSGP--RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVA-M 194
ESP +++SS GS P +P R L G S+P H SQG +V +
Sbjct: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPH----HSQGFSVDNI 313
Query: 195 EAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRR 254
RGSP LL A+ + +A L L +Y
Sbjct: 314 MTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGS 373
Query: 255 QRGGGRGGGGRGGREAAATVHGNAAASSSAAA 286
GGG G G GG A T H N A S AA
Sbjct: 374 SGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAA 405
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 50.1 bits (118), Expect = 3e-06
Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 33/171 (19%)
Query: 35 HATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPW 94
H+ HP S P +PPT+P PP A L+ G P P PP
Sbjct: 309 HSNQHPQS--------PAVPPTYPSGPPPAASALSTTPGN---------NGVPAPAAPP- 350
Query: 95 EVRGGARGPCSAPVGSRASSGPGLPSAAAARPARK-TLTCQPRSIESPATASSAGCGSGP 153
A GP ++P S S P + A A PA T QPR P+ S G G G
Sbjct: 351 ----SALGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPR---PPSVQPSGGGGGGS 403
Query: 154 RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 204
G G SS + G +G TS S A + A S GG
Sbjct: 404 G-------GGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGG 447
Score = 29.6 bits (65), Expect = 3.5
Identities = 51/209 (24%), Positives = 70/209 (33%), Gaps = 49/209 (23%)
Query: 15 PANPA-----PFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPT---FPGTQPPRAL 66
P +PA P P LS TP P + PP + P P GT P A
Sbjct: 314 PQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNSGTPAPYAQ 373
Query: 67 RLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGL-------- 118
+A + G Q RP ++P GG+ G S+ S +S+G G
Sbjct: 374 AVAPPAPSGPST----TQPRPPSVQPSGGGGGGSGGGGSSS-SSNSSAGGGAGKQNGATS 428
Query: 119 -PSAAAARPARKTLTCQ--------------------PRSIESPATASSAGCG------- 150
S A PA L+ P + + P+ A+ G G
Sbjct: 429 YSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSG 488
Query: 151 SGPRVPQVRLLGPGGRPSSPARDGSRRKA 179
+ P + + P PSSP S KA
Sbjct: 489 NNSGGPSLLVPLPVNPPSSPTPSFSDAKA 517
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 48.1 bits (113), Expect = 1e-05
Identities = 73/254 (28%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 82 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 128
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 129 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 184
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 185 SQSQGDAVAMEAEARGSPGGRVL--MQELTLLP-VEASLILSVVAAVLQLHSY------R 235
++G +++ G P V+ + L P V S LS + + S R
Sbjct: 168 GAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLNETLRGR 227
Query: 236 RPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAA-SSSAAARG--AAAA 292
RP G P G RG GR+ +A +A+A + AAR A
Sbjct: 228 RPPGPAP-----------AAAGATRGTAAPPGRDPSAWFLDSASACPTPLAARSWHPFVA 276
Query: 293 TTIDGGGKEDAAGA 306
+ G GK GA
Sbjct: 277 NKLCGRGKGAGGGA 290
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 47.0 bits (110), Expect = 2e-05
Identities = 60/219 (27%), Positives = 80/219 (36%), Gaps = 43/219 (19%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPP-----PLH---------------ITPVLP 54
PA P+P P PL+H PH HPP PP P H I +L
Sbjct: 54 PAPPSPPAAPCLP-PLAHHPHLPPHPPPPPPQHLAAPAHQPQPAAQLHRTTNFFIDNILR 112
Query: 55 PTF--PGTQPPRALRLAE-------GSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCS 105
P F QPP L +A G G +++ G+ A R P+ P GA
Sbjct: 113 PDFGCKKEQPPPQLLVAAAARGGAGGGGRVERDRGQTAAGRD-PVHPLGTRAPGAASLLC 171
Query: 106 APVGSRASSGP--GLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGP 163
AP A+ GP G AAA A K + + A ++A + + G
Sbjct: 172 AP---DANCGPPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGS 228
Query: 164 GGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSP 202
GG SP G++ HG A+ + A G P
Sbjct: 229 GGGAGSPGAQGTKYPE-HG------NPAILLMGSANGGP 260
Score = 33.5 bits (75), Expect = 0.24
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 255 QRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 307
Q G + G AAA AAA++ AAA AAAA D GG GAG
Sbjct: 184 QPAAAGAGASKAGNPAAAAA---AAAAAVAAAAAAAAAKPSDTGGGGSGGGAG 233
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 47.0 bits (110), Expect = 2e-05
Identities = 69/288 (23%), Positives = 94/288 (32%), Gaps = 64/288 (22%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSP-PPLHITPVLPPTFP--------------- 58
P P+ ++ R HT H T HP S+ PP H LPPT
Sbjct: 59 PEKPSRSYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHTRRKRKKEKTSAP 118
Query: 59 ---GTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG 115
GT P + A E ++EE ++ P+ PP G +GS
Sbjct: 119 PSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPP---PSGTPQKAKFSIGSDEDDS 175
Query: 116 PGLPSAAAA-------------RPARKTLTCQ---------PRSIESPATASSAGCGSGP 153
PGLP AA P + C ++ SP P
Sbjct: 176 PGLPGRAAVTKPLPSVGPHTDKSPQHSSRPCSELRDGDGTTDLALSSPRLLCCLPSSPSP 235
Query: 154 RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTL 213
R RL G RP SP+ R+ A G+PGG Q++
Sbjct: 236 RARASRLAGEKSRPWSPSASYDLRER-------------LCPGSALGNPGGP--EQQVPT 280
Query: 214 LPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRG 261
EA ++ S ++ H D P RR H + + GGRG
Sbjct: 281 DEAEAQMLGSADLDDMKSHRLE----DNPGVRR-HLVKKPSRTQGGRG 323
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 37 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 96
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 97 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 156
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 157 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 216
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 217 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 276
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 277 NAAASSSAAAR 287
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 37 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 96
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 97 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 156
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 157 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 216
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 217 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 276
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 277 NAAASSSAAAR 287
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 37 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 96
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 97 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 156
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 157 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 216
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 217 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 276
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 277 NAAASSSAAAR 287
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|21361699 sphingosine kinase 2 [Homo sapiens]
Length = 654
Score = 46.2 bits (108), Expect = 4e-05
Identities = 46/163 (28%), Positives = 58/163 (35%), Gaps = 25/163 (15%)
Query: 15 PANPAPFHT-PRKRHPLSHTPHATAHPPSSPPPLHIT------PVLPPTFPGTQPPRALR 67
PA+P P H+ PR + L+ TP PP + PLH + P+ P P L
Sbjct: 385 PASPTPAHSLPRAKSELTLTPDPA--PPMAHSPLHRSVSDLPLPLPQPALASPGSPEPLP 442
Query: 68 LAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPA 127
+ +G G + G A PL P SS PG P AA P
Sbjct: 443 ILSLNGGGPELAGDWGGAGDAPLSPD----------------PLLSSPPGSPKAALHSPV 486
Query: 128 RKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSP 170
+ P S P A G+ P LL P G P P
Sbjct: 487 SEGAPVIPPSSGLPLPTPDARVGASTCGPPDHLLPPLGTPLPP 529
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 46.2 bits (108), Expect = 4e-05
Identities = 58/217 (26%), Positives = 74/217 (34%), Gaps = 34/217 (15%)
Query: 2 PNLLYEWTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLH--------ITPVL 53
P + +W + H NP + S P HPPSS +H P L
Sbjct: 23 PRVNEQWGSRAH--PNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRL 80
Query: 54 PPTFPGTQPPRA-------LRLAEGSG---EGKQEEGRRAQARPRPLRPPWEVRGG---A 100
P P R LR A + E GRR + RP P PP + R
Sbjct: 81 LPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGP-SPPLQPRSRHPHT 139
Query: 101 RGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQ--- 157
R P + P + PG A +RP ++ RS +P A PR P+
Sbjct: 140 RYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARS-RTPGEAGPPRGDPRPRAPRPGD 198
Query: 158 ------VRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 188
P P SP R +R AG G T Q Q
Sbjct: 199 HPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQ 235
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 13/74 (17%)
Query: 24 PRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRA 83
P + P P HP SP L TP L P PG + GK+ G+
Sbjct: 184 PPRGDPRPRAPRPGDHPRRSPA-LRETPSLSPPSPGRR------------NGKRAAGKGT 230
Query: 84 QARPRPLRPPWEVR 97
+P+P PP R
Sbjct: 231 TPQPQPPPPPCATR 244
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.2 bits (108), Expect = 4e-05
Identities = 57/245 (23%), Positives = 74/245 (30%), Gaps = 14/245 (5%)
Query: 12 THVPANPAPFHTPRKRHPLSHTPHATAHPP-SSPPPLHITPVLPPTFPGTQPPR-ALRLA 69
TH P P+P P +P PP +P P + P P T P+ A L+
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 70 EGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAAR 125
S K+ A A P P P P P P P+A
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPS 972
Query: 126 PARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTS 185
P T P+ +P A+ GP P P G P+ PA K T
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGGPATP-----SPKGAPTPPAVTPPSPKGSPAATP 1027
Query: 186 QSQGDA---VAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTP 242
+G + A +GSP L + P A L P TP
Sbjct: 1028 FPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087
Query: 243 DPRRG 247
+G
Sbjct: 1088 PSPKG 1092
Score = 40.4 bits (93), Expect = 0.002
Identities = 40/161 (24%), Positives = 60/161 (37%), Gaps = 19/161 (11%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 74
P P P P +P T P++ P P P + G PP A +G
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPA 1383
Query: 75 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT-- 132
+R A P P +G P P+ + + + AA P++ LT
Sbjct: 1384 MTPPSPKRGPAIPSP-------KGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPP 1436
Query: 133 -CQPRSI-ESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 171
P S+ ++PAT++ G GP P + G P+ PA
Sbjct: 1437 AVTPVSLKKAPATSAPKG---GPATPSSK-----GDPTLPA 1469
Score = 39.7 bits (91), Expect = 0.003
Identities = 44/171 (25%), Positives = 57/171 (33%), Gaps = 19/171 (11%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 74
P PA K P + P PP++ PP + P G P + G
Sbjct: 1241 PTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG 1300
Query: 75 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRAS--SGPGLPSAAAARPARKTLT 132
+ A P P + G P AP + S G P+ A P+ K
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 133 CQPRSIESP----ATASSAGCGS--------GPRVPQVRLLGPGGRPSSPA 171
P S E P AT S G + GP +P P G P+SPA
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP-----SPKGDPTSPA 1406
Score = 38.1 bits (87), Expect = 0.010
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 9/169 (5%)
Query: 15 PANPAPFHTPRKRHPLSHTPH---ATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEG 71
PA P+P P +P AT P +P P +TP P P P
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 72 SGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTL 131
+ +G A A P P P P P P P+A P
Sbjct: 1037 AATPPSPKGSPA-ATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Query: 132 TCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 180
T P+ P A+ G P + G P++PA K G
Sbjct: 1096 TPSPKGAPMPPAATPPSPKGGLATPPHK-----GAPTTPAATPPSPKGG 1139
Score = 38.1 bits (87), Expect = 0.010
Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 28/175 (16%)
Query: 36 ATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWE 95
AT+ P +P P TP P PGT PP+ A P P
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKG-------------------APTPPAVTPPS 1342
Query: 96 VRGGARGPCSAPVGSRASSGPGL---PSAAAARPARK--TLTCQPRSIESPATASSAGCG 150
+G P + P + P P+ AA P+ K P PA S G
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG-- 1400
Query: 151 SGPRVPQVRLLGPGGRPSSP-ARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 204
P P V L P P++P R+G+ + T + +A A +P G
Sbjct: 1401 -DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG 1454
Score = 37.7 bits (86), Expect = 0.013
Identities = 38/167 (22%), Positives = 52/167 (31%), Gaps = 14/167 (8%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 74
P PA K P + +P PP++ PP P+ G P A+ G
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS 1022
Query: 75 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG-PGLPSAAAARPARKTLTC 133
+ + P PP P +P + G P P+A P T
Sbjct: 1023 PAATPFPKGASTPPAATPP--------SPKGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Query: 134 QPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 180
+ +P A+ GP P P G P PA K G
Sbjct: 1075 SLKGAPTPPAATPPSPKGGPATP-----SPKGAPMPPAATPPSPKGG 1116
Score = 37.0 bits (84), Expect = 0.022
Identities = 46/173 (26%), Positives = 57/173 (32%), Gaps = 30/173 (17%)
Query: 23 TPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEG-- 80
TP P AT P +P TP P P T PP+ + + G
Sbjct: 1220 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 81 ---RRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGP-GLPSAAAARPARKTLTCQPR 136
+ P + PP +P G A+S P G P+ AA P P
Sbjct: 1280 TPPHKGAPNPAVVTPP------------SPKGGPATSPPKGAPTPPAATP--------PS 1319
Query: 137 SIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQG 189
SP T G P P V P G P+ PA S K G S +G
Sbjct: 1320 PKGSPGTPPPKG---APTPPAVTPPSPKGTPTLPATTPS-SKGGPTTPSSKEG 1368
Score = 36.2 bits (82), Expect = 0.037
Identities = 37/169 (21%), Positives = 57/169 (33%), Gaps = 18/169 (10%)
Query: 26 KRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEG----- 80
K+ P TP PSS V P T+ G P+ L + +E
Sbjct: 1559 KKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPA 1618
Query: 81 ------RRAQARPRPLRPPWE---VRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTL 131
+ A P P P + ++P G +P A+ PA+K
Sbjct: 1619 VTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGP 1678
Query: 132 TCQPRSIESPATAS----SAGCGSGPRVPQVRLLGPGGRPSSPARDGSR 176
T + +PA S +A GP+ + P P A++GS+
Sbjct: 1679 TALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSK 1727
Score = 33.1 bits (74), Expect = 0.32
Identities = 47/218 (21%), Positives = 70/218 (32%), Gaps = 32/218 (14%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSS--PPPLHITPVLPPTFPGTQPPRALRLAEGS 72
PA PAP P + +P PSS P +L P T P+ +
Sbjct: 1494 PATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAM 1553
Query: 73 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGL-PSAAAARPARKTL 131
++ A P P P + P ASS P + PS P+ K L
Sbjct: 1554 ---TVPSPKKTPAIPTPKEAP-----------ATPSSKEASSPPAVTPSTYKGAPSPKEL 1599
Query: 132 -------TCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRK---AGH 181
+ P+ +P + GP P P G P+SP S K
Sbjct: 1600 LIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP-----APKGTPTSPPVTPSSLKDSPTSP 1654
Query: 182 GCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEAS 219
+ G V ++ + G ++E+ + P S
Sbjct: 1655 ASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPES 1692
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 82 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 128
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 129 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 184
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 185 SQSQGDAVAMEAEARGSPGGRVL 207
++G +++ G P V+
Sbjct: 168 GAARGPDASLDTRREGWPRAAVV 190
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 82 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 128
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 129 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 184
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 185 SQSQGDAVAMEAEARGSPGGRVL 207
++G +++ G P V+
Sbjct: 168 GAARGPDASLDTRREGWPRAAVV 190
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 45.1 bits (105), Expect = 8e-05
Identities = 44/152 (28%), Positives = 56/152 (36%), Gaps = 11/152 (7%)
Query: 58 PGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPG 117
PG P+ A G+ GK + G + P L +RGGA P P G + ++GP
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPP--GPEGGKGAAGPP 713
Query: 118 LPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQV----RLLGPGGRPSSPARD 173
P AA P + + + + SP G GP V GP G P
Sbjct: 714 GPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPA 773
Query: 174 GSRRKAGHGCTSQSQGDAVAMEAEARGSPGGR 205
G G G G A RGSPG R
Sbjct: 774 GQPGDKGEGGAPGLPG-----IAGPRGSPGER 800
Score = 44.3 bits (103), Expect = 1e-04
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 99 GARGPCS--------APVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCG 150
G RGP P G R + GP P AA P R + P P + G
Sbjct: 489 GFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSD 548
Query: 151 SGPRVPQVRLLGPGGRPSSPARDGSRRKAG-HGCTSQSQGDAVAMEAEARGSPGG 204
P P + G GRP P G R + G G D + RG PGG
Sbjct: 549 GKPGPPGSQ--GESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG 601
Score = 38.5 bits (88), Expect = 0.008
Identities = 76/320 (23%), Positives = 94/320 (29%), Gaps = 70/320 (21%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 74
P P P T HP S PP P P PP PG P +G
Sbjct: 179 PGPPGPPGT--SGHPGSPGSPGYQGPPGEPG--QAGPSGPPGPPGAIGPSGPAGKDGESG 234
Query: 75 GKQEEGRRAQARPRPLRPP--------------WEVRGGARGPCSAP------------- 107
G R P ++ P ++ R G +G AP
Sbjct: 235 RPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENG 294
Query: 108 ----VGSRASSG----PGLPSAAAAR--PARKTLTCQPRSIESPATASSAGCGSGPRVPQ 157
+G R + G PGLP AA AR + QP P TA G
Sbjct: 295 APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGE-- 352
Query: 158 VRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVE 217
+GP G P S G R + G + +QG GSPGG+ M
Sbjct: 353 ---VGPAGSPGSNGAPGQRGEPGPQGHAGAQGP--PGPPGINGSPGGKGEM--------- 398
Query: 218 ASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGN 277
+ ++ PAG P G RGG G G+ A G
Sbjct: 399 GPAGIPGAPGLMGARGPPGPAGANGAP-------------GLRGGAGEPGKNGAKGEPGP 445
Query: 278 AAASSSAAARGAAAATTIDG 297
A G A DG
Sbjct: 446 RGERGEAGIPGVPGAKGEDG 465
Score = 31.6 bits (70), Expect = 0.92
Identities = 66/264 (25%), Positives = 83/264 (31%), Gaps = 29/264 (10%)
Query: 55 PTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASS 114
P PG PR GS + E G A P P G +G AP G +
Sbjct: 785 PGLPGIAGPR------GSPGERGETGPPGPAG-FPGAPGQNGEPGGKGERGAP-GEKGEG 836
Query: 115 GP----GLP--SAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR-LLGPGGRP 167
GP G P S A P + + + S P A G P P GP G
Sbjct: 837 GPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Query: 168 SSPARDGSRRKAGH----GCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILS 223
SP +DG AG+ G S A + +GSPG + P A L
Sbjct: 897 GSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQG--------PPGAPGPLG 948
Query: 224 VVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSS 283
+A + P G P PR + G G G G G + +
Sbjct: 949 -IAGITGARGLAGPPG-MPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGT 1006
Query: 284 AAARGAAAATTIDGGGKEDAAGAG 307
A G DG D + G
Sbjct: 1007 AGEPGRDGNPGSDGLPGRDGSPGG 1030
Score = 31.6 bits (70), Expect = 0.92
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 21/91 (23%)
Query: 41 PSSPPPL-----HITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWE 95
PS PP H P+ PP G + R R +EGS G Q P P PP
Sbjct: 1144 PSGPPGKDGTSGHPGPIGPP---GPRGNRGERGSEGS------PGHPGQ--PGPPGPP-- 1190
Query: 96 VRGGARGPCSAPVGSRASSGPGLPSAAAARP 126
GA GPC VG+ A +G G A P
Sbjct: 1191 ---GAPGPCCGGVGAAAIAGIGGEKAGGFAP 1218
Score = 31.2 bits (69), Expect = 1.2
Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 78 EEGRRAQARPRPLRPPWEVRG--GARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQP 135
E GR P R V G G +G AP + GPG P P K P
Sbjct: 559 ESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG--PPGKNGETGP 616
Query: 136 RSIESPATASSAGCGSGPRVPQ--VRLLGPGGRP---SSPARDGSRRKAGHGCTSQSQGD 190
+ P +GP PQ L G GG P P G + AG +GD
Sbjct: 617 QGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGD 676
Query: 191 AVAMEAEARGSPG 203
A A RG PG
Sbjct: 677 AGA--PGERGPPG 687
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.1 bits (105), Expect = 8e-05
Identities = 80/320 (25%), Positives = 110/320 (34%), Gaps = 39/320 (12%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL------PPTFPGT---QPPRA 65
P +P+ P+ PL+ P A PP PP TP L P +FPG P +
Sbjct: 490 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 549
Query: 66 LRLAEGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSA 121
L ++ + Q A Q P P P ++ R P P + SGP L A
Sbjct: 550 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGP--DTSVSGPRLTLA 606
Query: 122 AAARPARKTLTCQPRSIESPATAS-SAGCGSGPRVPQVRLLGP-GGRPSSPARDGSRRKA 179
A P ++ P A S+ S P + GP GG +SP D
Sbjct: 607 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 666
Query: 180 GHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAG 239
S+ +A RG+PG + T P A + ++ + P
Sbjct: 667 HPAAWSRGPAPPLAF----RGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGA 721
Query: 240 DTPDPRRGHHRHRRRQRGGGRGGGGR------------GGREAAATVHGNAAASSSAAAR 287
P P G + G G G R G +A+ H + AAA
Sbjct: 722 LDPGPSPG-TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAE 780
Query: 288 GAAAATTIDGGGKEDAAGAG 307
GAA + GGG A G G
Sbjct: 781 GAAGGS---GGGPGGAEGGG 797
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 14 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 70
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 531 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 590
Query: 71 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 117
G G R P PP R + GP A S A+S GP
Sbjct: 591 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 650
Query: 118 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 164
+AA+ P + C P + PA + G +P GPG
Sbjct: 651 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 710
Query: 165 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 224
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 711 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 769
Query: 225 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 284
++ L L + AG G GGG G T AA S +
Sbjct: 770 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 810
Query: 285 AARGAAAATTID 296
R A + +D
Sbjct: 811 LGRWAELLSPLD 822
Score = 35.0 bits (79), Expect = 0.084
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 8/119 (6%)
Query: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 385 PLS--PLATP-PPQAPPALALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 440
Query: 89 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSA 147
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA 495
Score = 34.3 bits (77), Expect = 0.14
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 42/213 (19%)
Query: 15 PANP--APFHTPRKRHP-------LSHTPHATAHPP----SSPPPLHITPVLPPTFPGTQ 61
PA+P +P TP + P L P A PP ++PPP P+ P +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 62 PPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLP 119
PP A + QA P PP G A S P+ A+ P P
Sbjct: 515 PPPQAPPALATPP--------LQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 120 SAAAA--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 171
AA PA TL PR +P +S SGPR+ GP P P+
Sbjct: 564 PVLAAPLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPS 616
Query: 172 RDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 204
R S +G S A + E RG G
Sbjct: 617 RSPSSTLSGPDLAGHS-SSATSTPEELRGYDSG 648
Score = 28.5 bits (62), Expect = 7.8
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHP-PSSPPPLHITPVLPPTFPGTQPPRAL--RLAEG 71
P PA H+ L+ TP A P PS+PP L P PP P +Q +L +
Sbjct: 319 PTLPATPHSSSLTCQLA-TPLPLAPPSPSAPPSLQTLP-SPPATPPSQATTSLGSPTLQA 376
Query: 72 SGEGKQEEGRRAQARPRPLRPPW----EVRGGARGPCSAPVGSRASSGPGLPSAAA 123
+ A P P PP ++ P S P+ A+ P P+A A
Sbjct: 377 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 432
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.1 bits (105), Expect = 8e-05
Identities = 80/320 (25%), Positives = 110/320 (34%), Gaps = 39/320 (12%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL------PPTFPGT---QPPRA 65
P +P+ P+ PL+ P A PP PP TP L P +FPG P +
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510
Query: 66 LRLAEGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSA 121
L ++ + Q A Q P P P ++ R P P + SGP L A
Sbjct: 511 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGP--DTSVSGPRLTLA 567
Query: 122 AAARPARKTLTCQPRSIESPATAS-SAGCGSGPRVPQVRLLGP-GGRPSSPARDGSRRKA 179
A P ++ P A S+ S P + GP GG +SP D
Sbjct: 568 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 627
Query: 180 GHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAG 239
S+ +A RG+PG + T P A + ++ + P
Sbjct: 628 HPAAWSRGPAPPLAF----RGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGA 682
Query: 240 DTPDPRRGHHRHRRRQRGGGRGGGGR------------GGREAAATVHGNAAASSSAAAR 287
P P G + G G G R G +A+ H + AAA
Sbjct: 683 LDPGPSPG-TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAE 741
Query: 288 GAAAATTIDGGGKEDAAGAG 307
GAA + GGG A G G
Sbjct: 742 GAAGGS---GGGPGGAEGGG 758
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 14 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 70
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 551
Query: 71 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 117
G G R P PP R + GP A S A+S GP
Sbjct: 552 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 611
Query: 118 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 164
+AA+ P + C P + PA + G +P GPG
Sbjct: 612 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 671
Query: 165 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 224
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 672 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 730
Query: 225 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 284
++ L L + AG G GGG G T AA S +
Sbjct: 731 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 771
Query: 285 AARGAAAATTID 296
R A + +D
Sbjct: 772 LGRWAELLSPLD 783
Score = 35.0 bits (79), Expect = 0.084
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 8/119 (6%)
Query: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 346 PLS--PLATP-PPQAPPALALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 401
Query: 89 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSA 147
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA 456
Score = 34.3 bits (77), Expect = 0.14
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 42/213 (19%)
Query: 15 PANP--APFHTPRKRHP-------LSHTPHATAHPP----SSPPPLHITPVLPPTFPGTQ 61
PA+P +P TP + P L P A PP ++PPP P+ P +
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 475
Query: 62 PPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLP 119
PP A + QA P PP G A S P+ A+ P P
Sbjct: 476 PPPQAPPALATPP--------LQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 120 SAAAA--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 171
AA PA TL PR +P +S SGPR+ GP P P+
Sbjct: 525 PVLAAPLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPS 577
Query: 172 RDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 204
R S +G S A + E RG G
Sbjct: 578 RSPSSTLSGPDLAGHS-SSATSTPEELRGYDSG 609
Score = 32.3 bits (72), Expect = 0.54
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 29 PLSHTPHATAHP-----PSSPPPLHITPVLPPTFPGTQPPRAL--RLAEGSGEGKQEEGR 81
PLS +P AT P PS+PP L P PP P +Q +L + +
Sbjct: 289 PLSSSPLATPSPSAPPSPSAPPSLQTLP-SPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 82 RAQARPRPLRPPW----EVRGGARGPCSAPVGSRASSGPGLPSAAA 123
A P P PP ++ P S P+ A+ P P+A A
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
>gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]
Length = 1843
Score = 45.1 bits (105), Expect = 8e-05
Identities = 59/215 (27%), Positives = 79/215 (36%), Gaps = 17/215 (7%)
Query: 13 HVPANPAPFHTP----RKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 68
H ++PA TP K L T P P P H+T PP P +
Sbjct: 1293 HSHSSPAGQRTPGGSQTKTPKLDPTMPPKKKPQLPPKPAHLTQSHPPQRLPKPLPLSPSF 1352
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVG-SRASSGPGLPSAAAARPA 127
+ G+ + + G R A P+P + P V G P G S+ S GL S A RP
Sbjct: 1353 SSEVGQREHQRGERDTAIPQPAKVPTTVDQGHIPLARCPSGHSQPSLQHGL-STTAPRPT 1411
Query: 128 RKTLT-CQPRSIESPA------TASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 180
+ T +S E P +S G GP Q G P SP +K
Sbjct: 1412 KNQATGSNAQSSEPPKLNALNHDPTSPQWGPGPSGEQPMEGSHQGAPESPDSLQRNQKEL 1471
Query: 181 HGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLP 215
G +Q Q A+E EA S + L + +P
Sbjct: 1472 QGLLNQVQ----ALEKEAASSVDVQALRRLFEAVP 1502
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 44.7 bits (104), Expect = 1e-04
Identities = 84/350 (24%), Positives = 108/350 (30%), Gaps = 63/350 (18%)
Query: 3 NLLYEWTRKTHVPANPAPFHTPRKRHPLSH--TPHATAHPPSSPPPLHITPVLPPTFPGT 60
+++ W+ + H NP K H H P S P TP LP PG
Sbjct: 56 DIIARWSAQ-HSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLP--HPGD 112
Query: 61 QPPRALRLAEGSGEGKQEEGRRAQAR-----------------PRPLRPPWEVRGGARGP 103
PR R G G + G++ Q R PRP PP GG R
Sbjct: 113 HHPRH-RKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRP--PPNLQEGGQRAI 169
Query: 104 CSAP----------------VGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSA 147
P G R S P LP AA + T P + P A A
Sbjct: 170 FQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGA 229
Query: 148 GCGSGPRVPQVRLLG----PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARG--- 200
R P++R P P + +R R AG G+ A G
Sbjct: 230 S-----REPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGG 284
Query: 201 -SPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRH----RRRQ 255
+PG + +A + L+ R P G+ RRR+
Sbjct: 285 RNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 344
Query: 256 RGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAG 305
R RGGGG G E HG A+ AA G G+ G
Sbjct: 345 R---RGGGGEG--EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389
Score = 35.8 bits (81), Expect = 0.049
Identities = 63/236 (26%), Positives = 79/236 (33%), Gaps = 35/236 (14%)
Query: 41 PSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEG--RRAQARPRPLRPPWEVRG 98
P S PPL P PG P A G EG E R ARP P P +
Sbjct: 194 PKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSR 253
Query: 99 GARG-----PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGS-G 152
+R P G ++ P P R P S +GC + G
Sbjct: 254 ASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVG 313
Query: 153 PRVPQVRLLGPGGRPSSPARDGS-----RRKAGHGCTSQSQGDAVAMEAEARGSPGGRVL 207
R G +P + + +G RR+ G + +G SP GR
Sbjct: 314 LRRGDCDRAG-SSQPPATSGNGERCRFCRRRRRRGGGGEGEG---THATHGPASPPGRRH 369
Query: 208 MQELTLLPVEASLILSVVAAVLQLHS---YRRPAGDTPDPRRGHHRHRRRQRGGGR 260
+E V AAVL+ S RR TP PRR H +R GGGR
Sbjct: 370 DEE-------------VGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQR--FGGGR 410
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 14 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 70
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 800 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859
Query: 71 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 117
G G R P PP R + GP A S A+S GP
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 919
Query: 118 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 164
+AA+ P + C P + PA + G +P GPG
Sbjct: 920 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 979
Query: 165 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 224
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 980 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 1038
Query: 225 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 284
++ L L + AG G GGG G T AA S +
Sbjct: 1039 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 1079
Query: 285 AARGAAAATTID 296
R A + +D
Sbjct: 1080 LGRWAELLSPLD 1091
Score = 39.7 bits (91), Expect = 0.003
Identities = 59/209 (28%), Positives = 76/209 (36%), Gaps = 28/209 (13%)
Query: 12 THVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL--PPTFPGTQPPRALRLA 69
T P P P P + P S P ++PPP + P+L PP PP +L ++
Sbjct: 721 TPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP-RVPPLLAAPPLQVPPSPPASLPMS 779
Query: 70 EGSGEGKQEEGRRA----QARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLPSAAA 123
+ Q A QA P PP G A S P+ A+ P P A
Sbjct: 780 PLAKPPPQAPPALATPPLQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA 836
Query: 124 A--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGS 175
A PA TL PR +P +S SGPR+ GP P P+R S
Sbjct: 837 APLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPSRSPS 889
Query: 176 RRKAGHGCTSQSQGDAVAMEAEARGSPGG 204
+G S A + E RG G
Sbjct: 890 STLSGPDLAGHS-SSATSTPEELRGYDSG 917
Score = 38.9 bits (89), Expect = 0.006
Identities = 74/291 (25%), Positives = 95/291 (32%), Gaps = 63/291 (21%)
Query: 23 TPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRR 82
+P P+S P AT PP +PPPL P+ P P PP +
Sbjct: 709 SPPASPPMS--PSATP-PPQAPPPLAAPPLQVPPSPPASPPMS----------------- 748
Query: 83 AQARPRPLRPPW----EVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSI 138
A P P PP ++ P S P+ A P P A A P + L P S
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALAT-PPLQALPSPPASF 807
Query: 139 ESPATASSAG-------CGSGPRVPQV----RLLGPGGRPSSPARDGSRRKAGHGCTSQS 187
A S + P+ P V L P P+SP RR G +
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Query: 188 QGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRG 247
G + + A A G P P S ++ L HS A TP+ RG
Sbjct: 868 SGPRLTL-ALAPGPPP-----------PPSRSPSSTLSGPDLAGHS--SSATSTPEELRG 913
Query: 248 HHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAA-ARGAAAATTIDG 297
+ G GG A+ AA AA +RG A G
Sbjct: 914 Y------------DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRG 952
Score = 36.2 bits (82), Expect = 0.037
Identities = 43/142 (30%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 610 PLS--PLATP-PPQAPPXLALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 665
Query: 89 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAG 148
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 666 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA- 720
Query: 149 CGSGPRVPQVRLLGPGGRPSSP 170
P+ P P P SP
Sbjct: 721 -TPPPQAPPPLAAPPLQVPPSP 741
Score = 32.7 bits (73), Expect = 0.41
Identities = 43/163 (26%), Positives = 53/163 (32%), Gaps = 15/163 (9%)
Query: 19 APFHTPRKRHPLSHTPHATAHPPSSP------PPLHITPVLPPTFPGTQPPRALRLAEGS 72
+P +P HPL +H P +P PPL L P P Q P A
Sbjct: 478 SPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAP--PSLQTPPASLTTPPL 535
Query: 73 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPC--SAPVGSRASSGPGLPSAAAARP--AR 128
Q PL P PC AP + P PS+ A P A
Sbjct: 536 ENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP 595
Query: 129 KTLTCQP-RSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSP 170
L P + + SP + A P+ P L P P SP
Sbjct: 596 PALASPPLQGLPSPPLSPLA--TPPPQAPPXLALPPLQAPPSP 636
Score = 32.0 bits (71), Expect = 0.71
Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 16 ANPAPFHTPRKRHPLSHTPHATAHP-PSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 74
A P P P P TP A P PS+PP L P P T P PP
Sbjct: 324 ATPLPATLPPS--PPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPP-------SMTT 374
Query: 75 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPV---GSRASSGPGLPSAAAARPARKTL 131
+ Q P P++ P + + +P+ +A++ G P+ A L
Sbjct: 375 PPMQAPPSLQTIP-PIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQA---THSFL 430
Query: 132 TCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSP 170
T PR ++ T+ S + P P L P P+SP
Sbjct: 431 TMSPRQTQASLTSPSRPASTPPDSPP--LQAPLSLPASP 467
Score = 30.8 bits (68), Expect = 1.6
Identities = 30/115 (26%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 9 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 68
T P PAP PL+ P T ++PPP + P G P L
Sbjct: 555 TPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPL 614
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAA 123
A QA P PP ++ P S P+ A+ P P+A A
Sbjct: 615 ATPP----------PQAPPXLALPP--LQAPPSPPASPPLSPLATPSPQAPNALA 657
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 44.3 bits (103), Expect = 1e-04
Identities = 66/271 (24%), Positives = 97/271 (35%), Gaps = 37/271 (13%)
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASSGPGLPSAAAAR 125
AE +GE G +++ R +P R V G G S ++G +
Sbjct: 506 AEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNK 565
Query: 126 PARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSR----RKAGH 181
+R +PR A A+ G G + P + G S G + + AG
Sbjct: 566 QSRGGGGNKPRQWGQTAAAAKTR-GGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGT 624
Query: 182 GCTSQS------QGDAVAME------AEARGSPGGRVLMQELTLLPVEASLILSVVAAVL 229
G S+ Q DA A E A +RGS G + Q+ P A S AAV
Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQK----PAAAGSESSAAAAVG 680
Query: 230 QLHSYRRPAGDTPDPRRG-------------HHRHRRRQRGGGRGGGGRGGREAAATVHG 276
Q R+ RG R ++ + G RGGGG R +
Sbjct: 681 QEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSR 740
Query: 277 NAAASSSAAARGAAAATTIDGGGKEDAAGAG 307
+ + S + + AAA+ + GGG + G G
Sbjct: 741 GSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/270 (23%), Positives = 97/270 (35%), Gaps = 60/270 (22%)
Query: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGP--------CSAPVGSRASSGPGLPS 120
A G+ + G++ + R W+ GA G +A G+++ G G
Sbjct: 64 AAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKP 123
Query: 121 AAAARPARKTLTCQPR-SIESPATASSAGCGSGPR----VPQVRLLGPGGRPSSPARDGS 175
+ A T + +PR + A A S G+G + V+ G G +P A G+
Sbjct: 124 RRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQG-GEKPQKAAAAGA 182
Query: 176 RRKAG-----HGCTSQSQGDAVAMEAEARG----SPGGRVLMQELTLLPVEASLILSVVA 226
+ ++G G S+ D + EA+ + GGR
Sbjct: 183 KSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGR--------------------- 221
Query: 227 AVLQLHSYRRPAGDTPDPRRGHHRHRRRQR---------GGGRGGGGRGGREAAATVHGN 277
+ H +PA RRG + ++QR G R G RGG + G
Sbjct: 222 --RKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQ 279
Query: 278 AAASSSAAARGAAAATTIDGGGKEDAAGAG 307
AA + A RGAA A G K A G G
Sbjct: 280 NAALAGAKRRGAATA-----GEKPAAKGRG 304
Score = 28.9 bits (63), Expect = 6.0
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 239 GDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARG---------A 289
G + PRR + + + G R GGG+ R AA + A +RG +
Sbjct: 422 GGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKAR-QKAAEAGAESRGDKKQGRQKAS 480
Query: 290 AAATTIDGGGKEDAAG 305
AA T GGG + +G
Sbjct: 481 AAGTKSRGGGLKSHSG 496
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 43.9 bits (102), Expect = 2e-04
Identities = 78/281 (27%), Positives = 103/281 (36%), Gaps = 64/281 (22%)
Query: 14 VPANPAPFH----TPRKRH--PLSHTPHATAH--PPSSPP-------PLHITPVL-PPTF 57
+P+ P H TPR R+ PL TP PP S P PL P++ PPT
Sbjct: 791 LPSTPDSSHHAQATPRWRYNKPLPPTPDLPQPHLPPISAPGSSRIYRPLPPLPIIDPPTE 850
Query: 58 PGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPG 117
P PP++ + + G G A+ RP W V P A G +
Sbjct: 851 PPPLPPKSRGRSRSTRGGHMNSG--GHAKTRPACQDWTV------PLPASAGRTS----- 897
Query: 118 LPSAAAARPARKTLTCQPRSIESPATASSAG----CGSGPRVPQV-RLLGPGGR------ 166
P A A T T + +S SP A S C S P P L GP +
Sbjct: 898 WPPATARSTESFTSTSRSKSEVSPGMAFSNMTNFLCPSSPTTPWTPELQGPTSKDEAGVS 957
Query: 167 --PSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARG-SPGGRVLMQELTLLPVEASLILS 223
P +PAR+ RR T+ QG A G SP G+ E + L L
Sbjct: 958 EHPEAPAREPLRR------TTPQQG------ASGPGRSPVGQARQPE-----KPSHLHLE 1000
Query: 224 VVAAVLQLHSYRRPAGDTPD----PRRGHHRHRRRQRGGGR 260
++ RP GD+ P G ++H+ R G R
Sbjct: 1001 KASSWPHRRDSGRPPGDSSGQAVAPSEGANKHKGWSRQGLR 1041
Score = 29.3 bits (64), Expect = 4.6
Identities = 31/125 (24%), Positives = 40/125 (32%), Gaps = 21/125 (16%)
Query: 15 PANPAPFHTPRKRHPLSHTPHATAHPPSSP---PPLHITPVLPPTFPGTQPPRALRLAEG 71
P++P TP + P S + P +P P TP + PG P R E
Sbjct: 934 PSSPTTPWTPELQGPTSKDEAGVSEHPEAPAREPLRRTTPQQGASGPGRSPVGQARQPEK 993
Query: 72 SGEGKQEEGRRAQARPRPLRPPWEVRG------------------GARGPCSAPVGSRAS 113
E+ R RPP + G G R P P GS S
Sbjct: 994 PSHLHLEKASSWPHRRDSGRPPGDSSGQAVAPSEGANKHKGWSRQGLRRPSILPEGSSDS 1053
Query: 114 SGPGL 118
GP +
Sbjct: 1054 RGPAV 1058
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 43.9 bits (102), Expect = 2e-04
Identities = 50/184 (27%), Positives = 61/184 (33%), Gaps = 21/184 (11%)
Query: 15 PANPAP---------FHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRA 65
P PAP F P P+ P P PPP + PP T P A
Sbjct: 403 PRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVA 462
Query: 66 LRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAAR 125
L G G + A P PP A P AP + A P + + A A
Sbjct: 463 PPLTPGLGHKESALAPTA----APALPPALAADQAPAPSPAPAPTVAEPSPPVSAPAPAA 518
Query: 126 PARKTLTCQPRSIESP--ATASSAGCGSGPR------VPQVRLLGPGGRPSSPARDGSRR 177
KT T + + + AT G GPR VP G GG +S + R
Sbjct: 519 APIKTRTRRNKGSRAARGATRKDGLHGDGPRERATATVPDSSGGGGGGSGASQTGAANTR 578
Query: 178 KAGH 181
A H
Sbjct: 579 AARH 582
Score = 32.7 bits (73), Expect = 0.41
Identities = 54/229 (23%), Positives = 73/229 (31%), Gaps = 49/229 (21%)
Query: 18 PAPFHTPRKRHPLSHTPHATAHPPS------SPPPLHIT-----PVLPPTFPGT----QP 62
PA PR R L + PPS PPP ++ P P FP +P
Sbjct: 114 PAGTPVPRIRRLLEASHRGQGDPPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKP 173
Query: 63 PRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAA 122
P L E + + R A P PP E + G R +R + P
Sbjct: 174 PPPL-----PSERQPADRRITPALATPASPPTESQAGPRNQGQTAGRARGGAPPHAGEGE 228
Query: 123 AARPARK----TLTCQ-----------PRSIESPATASSAGCGSG-------PRVPQVRL 160
A+PA +L C+ P + S A +S G G G + +
Sbjct: 229 MAQPADSESGLSLLCKITFKSRPSLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEV 288
Query: 161 LGPGGRPSSPA-------RDGSRRKAGHGCTSQSQGDAVAMEAEARGSP 202
L G P A R + G G G A ++AR P
Sbjct: 289 LKQGPLPPGAARPLGEVSRGAQEAEGGDGDGEGCSGPPSAPASQARALP 337
Score = 29.6 bits (65), Expect = 3.5
Identities = 37/140 (26%), Positives = 46/140 (32%), Gaps = 12/140 (8%)
Query: 14 VPANPAPFHTPRKRHP-LSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGS 72
+P P P P + P L TP A PP +P H L PT PP LA
Sbjct: 437 LPPLPPPTPPPTLQPPALQPTPLPVA-PPLTPGLGHKESALAPTAAPALPP---ALAADQ 492
Query: 73 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT 132
A P P A P +AP+ +R G +A A
Sbjct: 493 APAPSPAPAPTVAEPSP-------PVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHG 545
Query: 133 CQPRSIESPATASSAGCGSG 152
PR + S+G G G
Sbjct: 546 DGPRERATATVPDSSGGGGG 565
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 43.1 bits (100), Expect = 3e-04
Identities = 70/240 (29%), Positives = 84/240 (35%), Gaps = 56/240 (23%)
Query: 46 PLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCS 105
PL+ PP P PP G + E RA RP P + G R CS
Sbjct: 60 PLYRVSAPPPAPPPPPPP---------GGPSRSERPRAGLRPGAFVSPGPL--GRRASCS 108
Query: 106 APVGSRAS---SGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 162
GS S L +A PAR + R+ S G S PR
Sbjct: 109 GRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTF-------SPGPASPPRA------S 155
Query: 163 PGGRPSSPARDGS-----RRKAGH-------GCTSQSQGDAVAMEAEARGSPGGRVLMQE 210
PGGRP S AR S RR H G S+ + ARG P +
Sbjct: 156 PGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARGPPFPGI--SG 213
Query: 211 LTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHH------RHRRRQRGGGRGGGG 264
+T PV V++ V + H R P G +P G R RR R GR GGG
Sbjct: 214 MTRGPV-------VLSGVNRQH--RWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGG 264
Score = 33.1 bits (74), Expect = 0.32
Identities = 48/180 (26%), Positives = 63/180 (35%), Gaps = 19/180 (10%)
Query: 44 PPPLHITPVLPPTFPG-TQPPRALRLAEGSGEGKQEEGRRAQ--ARPRPLR--PPWEVRG 98
P + P L PG PPRA + G G + GR AR PL PP
Sbjct: 132 PARAQVPPALRTFSPGPASPPRA---SPGGRPGSEARGRSGAECARRVPLHHGPPGASGV 188
Query: 99 GARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATAS---SAGCGSGPRV 155
G+ + + GP P + L+ R P AS S G G R
Sbjct: 189 GSERDRKFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERP 248
Query: 156 PQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLP 215
+ RP +P R G G G + S G +A A G P +++ LLP
Sbjct: 249 ARALR-----RPRAPGRAGGGGPPGGGIPACSIGPGLARLAALGGLPS---ILESSRLLP 300
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 43.1 bits (100), Expect = 3e-04
Identities = 70/240 (29%), Positives = 84/240 (35%), Gaps = 56/240 (23%)
Query: 46 PLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCS 105
PL+ PP P PP G + E RA RP P + G R CS
Sbjct: 60 PLYRVSAPPPAPPPPPPP---------GGPSRSERPRAGLRPGAFVSPGPL--GRRASCS 108
Query: 106 APVGSRAS---SGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 162
GS S L +A PAR + R+ S G S PR
Sbjct: 109 GRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTF-------SPGPASPPRA------S 155
Query: 163 PGGRPSSPARDGS-----RRKAGH-------GCTSQSQGDAVAMEAEARGSPGGRVLMQE 210
PGGRP S AR S RR H G S+ + ARG P +
Sbjct: 156 PGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARGPPFPGI--SG 213
Query: 211 LTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHH------RHRRRQRGGGRGGGG 264
+T PV V++ V + H R P G +P G R RR R GR GGG
Sbjct: 214 MTRGPV-------VLSGVNRQH--RWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGG 264
Score = 33.1 bits (74), Expect = 0.32
Identities = 48/180 (26%), Positives = 63/180 (35%), Gaps = 19/180 (10%)
Query: 44 PPPLHITPVLPPTFPG-TQPPRALRLAEGSGEGKQEEGRRAQ--ARPRPLR--PPWEVRG 98
P + P L PG PPRA + G G + GR AR PL PP
Sbjct: 132 PARAQVPPALRTFSPGPASPPRA---SPGGRPGSEARGRSGAECARRVPLHHGPPGASGV 188
Query: 99 GARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATAS---SAGCGSGPRV 155
G+ + + GP P + L+ R P AS S G G R
Sbjct: 189 GSERDRKFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERP 248
Query: 156 PQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLP 215
+ RP +P R G G G + S G +A A G P +++ LLP
Sbjct: 249 ARALR-----RPRAPGRAGGGGPPGGGIPACSIGPGLARLAALGGLPS---ILESSRLLP 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,115,601
Number of Sequences: 37866
Number of extensions: 1184086
Number of successful extensions: 14832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 1287
Number of HSP's that attempted gapping in prelim test: 9516
Number of HSP's gapped (non-prelim): 5350
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.