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Search of human proteins with 239755904
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755904 PREDICTED: hypothetical protein XP_002344738 [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755904 PREDICTED: hypothetical protein XP_002344738 [Homo ... 421 e-118
gi|82546824 forkhead box K1 [Homo sapiens] 43 2e-04
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 43 2e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 41 8e-04
gi|7706469 Kruppel-like factor [Homo sapiens] 41 8e-04
gi|238859557 regulatory factor X1 [Homo sapiens] 40 0.001
gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] 40 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 40 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 40 0.001
gi|114431236 zinc finger protein 462 [Homo sapiens] 39 0.002
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 39 0.002
gi|39812378 RAN binding protein 9 [Homo sapiens] 39 0.004
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 39 0.004
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 39 0.004
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 38 0.005
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 38 0.005
gi|40807465 zinc finger protein 341 [Homo sapiens] 38 0.005
gi|11386183 WAS protein family, member 2 [Homo sapiens] 38 0.007
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 38 0.007
gi|148613878 acrosin precursor [Homo sapiens] 38 0.007
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 37 0.009
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 37 0.009
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 37 0.009
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 37 0.009
gi|54860079 nadrin isoform 1 [Homo sapiens] 37 0.009
gi|54860105 nadrin isoform 2 [Homo sapiens] 37 0.009
gi|87299628 biorientation of chromosomes in cell division 1-like... 37 0.009
gi|47132519 Ras association and pleckstrin homology domains 1 is... 37 0.009
gi|24497589 aristaless related homeobox [Homo sapiens] 37 0.009
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.009
>gi|239755904 PREDICTED: hypothetical protein XP_002344738 [Homo
sapiens]
Length = 205
Score = 421 bits (1083), Expect = e-118
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MGVAHLEDLLHDPAMVLLEGHLVGLGGVDTDEVGVVLVPLPVADALEEDLDEAEASFQPH 60
MGVAHLEDLLHDPAMVLLEGHLVGLGGVDTDEVGVVLVPLPVADALEEDLDEAEASFQPH
Sbjct: 1 MGVAHLEDLLHDPAMVLLEGHLVGLGGVDTDEVGVVLVPLPVADALEEDLDEAEASFQPH 60
Query: 61 QRQCGPYFGPLCSIHFFLHLQDVLQGPELGWVGVVHSFDTVMLPLMSALMGVNTGDPRQS 120
QRQCGPYFGPLCSIHFFLHLQDVLQGPELGWVGVVHSFDTVMLPLMSALMGVNTGDPRQS
Sbjct: 61 QRQCGPYFGPLCSIHFFLHLQDVLQGPELGWVGVVHSFDTVMLPLMSALMGVNTGDPRQS 120
Query: 121 KKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSA 180
KKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSA
Sbjct: 121 KKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSA 180
Query: 181 PGPSQPPAAGSGDASVATSARTAPS 205
PGPSQPPAAGSGDASVATSARTAPS
Sbjct: 181 PGPSQPPAAGSGDASVATSARTAPS 205
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 123 GGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPG 182
G R A R P S L C+A++A + PA P PAP PPP PPP P
Sbjct: 9 GARALLALRSAPCSPVL--------CAAAAA--AAFPAAAPPPAPAQPQPPPGPPPPPPP 58
Query: 183 PSQPPA---AGSGDASVATSARTA 203
P P A AGS S S +A
Sbjct: 59 PLPPGAIAGAGSSGGSSGVSGDSA 82
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 43.1 bits (100), Expect = 2e-04
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 123 GGR-WDTASRKGP-----VSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTP-PPR 175
GGR ++ R GP +S C+ F+K A + PA +P P A+ P PP
Sbjct: 216 GGRGYEDYRRSGPPAPLALSTCVVR---FAKTGALRGAALGPPAALPAPLTEAAPPAPPA 272
Query: 176 PPPSAPGPSQPPAAGSGDASVA 197
PP PGPS PA S +A A
Sbjct: 273 RPPPGPGPSSAPAKASPEAEEA 294
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 40.8 bits (94), Expect = 8e-04
Identities = 18/35 (51%), Positives = 18/35 (51%)
Query: 158 RPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
R A P P R PPP PPP GP PPA G G
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG 308
Score = 37.4 bits (85), Expect = 0.009
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 153 AISGSRPAVMPQPAPR-------ASTPPPRPPPSAPGPSQPPAAGS-GDASVATSA 200
A+ S P+ P P P A PPP PPP PGP PP S GD V T+A
Sbjct: 349 ALPSSAPSGPPPPPPSVLGVGPVAPPPPP-PPPPPPGPPPPPGLPSDGDHQVPTTA 403
Score = 34.3 bits (77), Expect = 0.076
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 157 SRPAV-MPQPAPRASTPPPRP--PPSAP-GPSQPPAAGSGDASVA 197
SRP+V +P P P PPP P P SAP GP PP + G VA
Sbjct: 328 SRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVA 372
Score = 30.4 bits (67), Expect = 1.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 158 RPAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
R A P P+ + PP PPPS P + PP
Sbjct: 307 RGAPPPPPSRAPTAAPPPPPPSRPSVAVPP 336
Score = 29.6 bits (65), Expect = 1.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Query: 168 RASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAP 204
R + PPP P P P PP SG R AP
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP 310
Score = 28.9 bits (63), Expect = 3.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 159 PAVMPQPAP--RASTPPPRPPPSAPGPSQPPAAGSGDAS 195
P P P P R S P PPP+ P PPA S S
Sbjct: 318 PTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPS 356
Score = 28.1 bits (61), Expect = 5.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 157 SRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
SR P P P ++ PP PP G PP + + A+ + PS
Sbjct: 283 SRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPS 331
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 40.8 bits (94), Expect = 8e-04
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 114 TGDPRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSA-ISGSRPAVMPQPAPRASTP 172
T PR K+ G GP + C+ G + +S PA +P P PRAS P
Sbjct: 141 TRGPRGLKREGA------PGPAASCMRGPGGRPPPPPDTPPLSPDGPARLPAPGPRASFP 194
Query: 173 PPRPPP--SAPGPS------QPPAAGSGDASVATSA 200
PP P APGP PPA G D + A +A
Sbjct: 195 PPFGGPGFGAPGPGLHYAPPAPPAFGLFDDAAAAAA 230
Score = 27.7 bits (60), Expect = 7.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 151 SSAISGSRPAVMPQPAPRASTPPPR---PPPSAPGPSQPPAAG 190
S + G P+P P PPP P P AP P PA G
Sbjct: 50 SMGLDGLGAEAAPEPPP--PPPPPAFYYPEPGAPPPYSAPAGG 90
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 159 PAVMPQPAPRAST-PPPRPPPSAPGPSQPPAAGS 191
P+ PQ P+A PPP PPP+AP P QPP A +
Sbjct: 15 PSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAA 48
>gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 329
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 16/83 (19%)
Query: 132 KGPVSICLSAGSGFSKCSASSA----------ISGSRPAVMPQPAPRASTPPP--RPP-- 177
K P + C G G S SA S PA+MP APR T P RP
Sbjct: 79 KPPSAKCRRPGPGVSAVSAGGQQRAPESQERPAEESAPALMPSSAPRGPTEPAFRRPSSA 138
Query: 178 --PSAPGPSQPPAAGSGDASVAT 198
P APGPS P AG ++A+
Sbjct: 139 DRPLAPGPSSSPGAGRAPRAMAS 161
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 157 SRPAVMPQPAPRAST--PPPRPPPSAPGPSQPPAAGSGD 193
++P V P P AS+ PPP PPPS PGP P + SG+
Sbjct: 290 NKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
Score = 32.7 bits (73), Expect = 0.22
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 155 SGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAP 204
S R +P P PP R PP GP PP S + S + + P
Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 156 GSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAG 190
GSRP ++P P R+++ P PPS PG P+ G
Sbjct: 123 GSRPPLLP-PGGRSTSAKPFSPPSGPGRFPVPSPG 156
Score = 31.2 bits (69), Expect = 0.64
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 155 SGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
S S A P P P PPP P PS+ G + P + S+++S PS
Sbjct: 301 SASSQAPPPPPPPSRPGPPPLP-PSSSGNDETPRLPQRNLSLSSSTPPLPS 350
Score = 30.8 bits (68), Expect = 0.84
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 130 SRKGPVSICLSAGSGF-SKCSASSAISGSRPAVMPQPAPRASTPPPRPPPS 179
SR G S L A S+ S SG RP +P P A PPP PPPS
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPP-LPPDRPSAGAPPP-PPPS 434
Score = 30.0 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 8/40 (20%)
Query: 156 GSRPAV----MPQPAPRASTPP----PRPPPSAPGPSQPP 187
G+RP++ +P P P+ + PP PRP S+ P PP
Sbjct: 272 GNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPP 311
Score = 29.6 bits (65), Expect = 1.9
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 115 GDPRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRAST-PP 173
G PRQ G G L GS +SS+ +RP + P P+ PP
Sbjct: 208 GGPRQPSPGPT--PPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 174 PRPPPSAPGPS------QPPAAGSGDASVATSARTAPS 205
P PPP PS PP + V ++ R + S
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAS 303
Score = 28.9 bits (63), Expect = 3.2
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 16/61 (26%)
Query: 153 AISGSRPAVMPQPAPRASTPPP-----RPPP--------SAPGPSQPPAAGSGDASVATS 199
++S S P P P+P S P P RPPP S P P PP + +G S A
Sbjct: 340 SLSSSTP---PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 200 A 200
A
Sbjct: 397 A 397
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 127 DTASRKGPVSIC--LSAGSGFSKCSASSAISGSRPAV-MPQPAPRASTPPPRPPPSAPGP 183
D R GP+ +S S+ ++ SR V P+ PR PP RP AP P
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430
Query: 184 SQP 186
P
Sbjct: 431 PPP 433
Score = 27.7 bits (60), Expect = 7.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Query: 156 GSRPAVMPQPAPRA-----STPPPRPPP--------SAPGPSQPPAAGS-GDASVATSAR 201
GS+P +P P P S+P R P +PGP+ PP G+ G A S R
Sbjct: 177 GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIR 236
Query: 202 TAP 204
+P
Sbjct: 237 QSP 239
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 149 SASSAISGSRPAVMPQPA------PRASTPPPRPP--PSAPGPSQPPAAGS 191
S + + S + PA P+ PR+ PP PP PSA P PP + S
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 157 SRPAVMPQPAPRAST--PPPRPPPSAPGPSQPPAAGSGD 193
++P V P P AS+ PPP PPPS PGP P + SG+
Sbjct: 290 NKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
Score = 32.7 bits (73), Expect = 0.22
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 155 SGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAP 204
S R +P P PP R PP GP PP S + S + + P
Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 156 GSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAG 190
GSRP ++P P R+++ P PPS PG P+ G
Sbjct: 123 GSRPPLLP-PGGRSTSAKPFSPPSGPGRFPVPSPG 156
Score = 31.2 bits (69), Expect = 0.64
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 155 SGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
S S A P P P PPP P PS+ G + P + S+++S PS
Sbjct: 301 SASSQAPPPPPPPSRPGPPPLP-PSSSGNDETPRLPQRNLSLSSSTPPLPS 350
Score = 30.8 bits (68), Expect = 0.84
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 130 SRKGPVSICLSAGSGF-SKCSASSAISGSRPAVMPQPAPRASTPPPRPPPS 179
SR G S L A S+ S SG RP +P P A PPP PPPS
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPP-LPPDRPSAGAPPP-PPPS 434
Score = 30.0 bits (66), Expect = 1.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 8/40 (20%)
Query: 156 GSRPAV----MPQPAPRASTPP----PRPPPSAPGPSQPP 187
G+RP++ +P P P+ + PP PRP S+ P PP
Sbjct: 272 GNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPP 311
Score = 29.6 bits (65), Expect = 1.9
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 115 GDPRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRAST-PP 173
G PRQ G G L GS +SS+ +RP + P P+ PP
Sbjct: 208 GGPRQPSPGPT--PPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 174 PRPPPSAPGPS------QPPAAGSGDASVATSARTAPS 205
P PPP PS PP + V ++ R + S
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAS 303
Score = 28.9 bits (63), Expect = 3.2
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 16/61 (26%)
Query: 153 AISGSRPAVMPQPAPRASTPPP-----RPPP--------SAPGPSQPPAAGSGDASVATS 199
++S S P P P+P S P P RPPP S P P PP + +G S A
Sbjct: 340 SLSSSTP---PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 200 A 200
A
Sbjct: 397 A 397
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 127 DTASRKGPVSIC--LSAGSGFSKCSASSAISGSRPAV-MPQPAPRASTPPPRPPPSAPGP 183
D R GP+ +S S+ ++ SR V P+ PR PP RP AP P
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430
Query: 184 SQP 186
P
Sbjct: 431 PPP 433
Score = 27.7 bits (60), Expect = 7.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Query: 156 GSRPAVMPQPAPRA-----STPPPRPPP--------SAPGPSQPPAAGS-GDASVATSAR 201
GS+P +P P P S+P R P +PGP+ PP G+ G A S R
Sbjct: 177 GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIR 236
Query: 202 TAP 204
+P
Sbjct: 237 QSP 239
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 149 SASSAISGSRPAVMPQPA------PRASTPPPRPP--PSAPGPSQPPAAGS 191
S + + S + PA P+ PR+ PP PP PSA P PP + S
Sbjct: 386 SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 39.3 bits (90), Expect = 0.002
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 126 WDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQ 185
WD + + SI S G +SS I+G + VM P + P P PPP P PSQ
Sbjct: 499 WDAVNSQSE-SISSSLNEGVVSYESSS-INGRKSGVMLDPLQQQQPPQPPPPPPPPPPSQ 556
Query: 186 P 186
P
Sbjct: 557 P 557
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 39.3 bits (90), Expect = 0.002
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 142 GSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
G+G C S SG++P+ P PAP PP P P P P PP A SG
Sbjct: 132 GAGSYPCGGGS--SGAQPSAPPPPAPPL---PPTPSPPPPPPPPPPPALSG 177
Score = 31.2 bits (69), Expect = 0.64
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 165 PAPRASTPPPRPPPSAPGPSQPPAAGSGDAS 195
P A PPP PPP P P PPA G+ S
Sbjct: 403 PDELAGLPPP-PPPPPPPPPPPPAGGAKPCS 432
Score = 30.0 bits (66), Expect = 1.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 142 GSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
G G + + A + + A P P + PPP PPP P P+Q P
Sbjct: 326 GYGAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPP-PPAPAQHP 370
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 38.5 bits (88), Expect = 0.004
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 142 GSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPP-------SAPGPSQPP--AAGSG 192
G+G A++A P P PA A PPP PPP A GP PP AAG G
Sbjct: 54 GAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPG 113
Query: 193 DAS-------VATSARTAP 204
A VA S+ AP
Sbjct: 114 PAGGAPTPALVAGSSAAAP 132
Score = 35.4 bits (80), Expect = 0.034
Identities = 21/66 (31%), Positives = 28/66 (42%)
Query: 140 SAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATS 199
+ G G +A+ + P AP PPP PP SA P+ P A G A+
Sbjct: 55 AGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGP 114
Query: 200 ARTAPS 205
A AP+
Sbjct: 115 AGGAPT 120
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 117 PRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRP 176
P++S +W R+ S G + C AS A +P+ + +A PPP P
Sbjct: 375 PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPL-LQPSAPSSSSSQAPLPPPFP 433
Query: 177 PPSAPGPSQPPAAGSGDASVATSARTAP 204
P P P+AGS S + AP
Sbjct: 434 APVVPASVPAPSAGSSLFSTGVAPALAP 461
Score = 27.3 bits (59), Expect = 9.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 136 SICLSAGSGFSKCSASSAI--------SGSRPAVM-PQPAPRAS-TPPPRPPPSAPGPSQ 185
++ L G S+CS + + S +V+ P P P +S P PPP A GP +
Sbjct: 275 TLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPR 334
Query: 186 PPAAGSGDASVATSA 200
++ +A++ S+
Sbjct: 335 SRSSSQAEATLGPSS 349
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 117 PRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRP 176
P++S +W R+ S G + C AS A +P+ + +A PPP P
Sbjct: 408 PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPL-LQPSAPSSSSSQAPLPPPFP 466
Query: 177 PPSAPGPSQPPAAGSGDASVATSARTAP 204
P P P+AGS S + AP
Sbjct: 467 APVVPASVPAPSAGSSLFSTGVAPALAP 494
Score = 27.3 bits (59), Expect = 9.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 136 SICLSAGSGFSKCSASSAI--------SGSRPAVM-PQPAPRAS-TPPPRPPPSAPGPSQ 185
++ L G S+CS + + S +V+ P P P +S P PPP A GP +
Sbjct: 308 TLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPR 367
Query: 186 PPAAGSGDASVATSA 200
++ +A++ S+
Sbjct: 368 SRSSSQAEATLGPSS 382
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 38.1 bits (87), Expect = 0.005
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 163 PQPAPRASTPPPRPPPSAPGPSQPPA 188
P P+P +S+P P PPP P P PPA
Sbjct: 197 PSPSPSSSSPSPPPPPPPPAPPAPPA 222
Score = 29.3 bits (64), Expect = 2.4
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 15/72 (20%)
Query: 143 SGFSKCSASSAISGSRPAVMP---------------QPAPRASTPPPRPPPSAPGPSQPP 187
SG + S+SS GSR + + + +A P P S P P P
Sbjct: 754 SGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPPKESAPSSGPPPKPPV 813
Query: 188 AAGSGDASVATS 199
++GSG +S ++S
Sbjct: 814 SSGSGSSSSSSS 825
Score = 28.9 bits (63), Expect = 3.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPS--QPPAA 189
PA P P+ +S+P P P S+P P PP A
Sbjct: 184 PAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPA 216
Score = 27.3 bits (59), Expect = 9.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 157 SRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTA 203
S+ A P+ + +S PPP+PP S+ S ++ V ++ A
Sbjct: 792 SKKARPPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVA 838
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 140 SAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATS 199
SAGSG ASS ++ P + ++ PPP PPP P PPA+ A +++
Sbjct: 488 SAGSG-----ASSPLTSPSSPTPPSTSGISALPPPPPPPPPPAAPLPPASTEAPAQLSSQ 542
Query: 200 A 200
A
Sbjct: 543 A 543
Score = 28.5 bits (62), Expect = 4.2
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 115 GDPRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAPRASTPPP 174
G + KK R A +K S ++ +K S S+ +GS A P +P + TPP
Sbjct: 451 GSEEERKK--RKILARKKSKRSALENSEEHSAKYSNSNNSAGSG-ASSPLTSPSSPTPPS 507
Query: 175 R------PPPSAPGPSQPPAAGSGDASVATSAR 201
PPP P P PPAA AS A+
Sbjct: 508 TSGISALPPP--PPPPPPPAAPLPPASTEAPAQ 538
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 38.1 bits (87), Expect = 0.005
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 151 SSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
SS S P+ + QP P PPP PPP P P PP G
Sbjct: 164 SSLNMHSVPSYLTQPPPPPPPPPPLPPPPPPQPPPPPPQSLG 205
Score = 34.3 bits (77), Expect = 0.076
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAP----GPSQPPAAGSGDASVATSA 200
P P P P PPP+PPP P P +P G+G V ++A
Sbjct: 179 PPPPPPPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAA 224
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 37.7 bits (86), Expect = 0.007
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 159 PAVMPQPA--PRASTPPPRPPPSAPGPSQPPAAGS 191
P + P P P PPP PPP PGP PP G+
Sbjct: 376 PTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGA 410
Score = 37.4 bits (85), Expect = 0.009
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 142 GSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRP---PPSAPGPSQPPAAG 190
GSG + SS +S S P P P S P P+P PP AP P PP G
Sbjct: 283 GSGLAGPKRSSVVSPSHP---PPAPPLGSPPGPKPGFAPPPAPPPPPPPMIG 331
Score = 32.7 bits (73), Expect = 0.22
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 159 PAVMPQPAPRASTPPPRPP-----PSAPGPSQPPA 188
PA P P P PPP PP P P P PP+
Sbjct: 320 PAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 8/37 (21%)
Query: 159 PAVMPQPAPR--------ASTPPPRPPPSAPGPSQPP 187
P P P+P A+ PPP PPP+A P+ PP
Sbjct: 344 PGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPP 380
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor
[Homo sapiens]
Length = 1336
Score = 37.7 bits (86), Expect = 0.007
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 145 FSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGD 193
+S CSA +A ++P PQP P + P PRP P P P P S D
Sbjct: 894 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAPRPAP-GPAPFVPRERASVD 941
Score = 28.1 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 142 GSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPS------APGPSQPPA 188
G G + A+ + RP +P A+ PP +PPPS P++PPA
Sbjct: 974 GLGLGEARAAPRGAAGRPL-----SPPAAQPPQKPPPSYFAIVRDKEPAEPPA 1021
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 37.7 bits (86), Expect = 0.007
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
PA P+P P S PPP PPP++P P PP
Sbjct: 340 PAAQPRPPP--SPPPPPPPPASPLPPPPP 366
Score = 35.0 bits (79), Expect = 0.045
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 163 PQPAPRASTPP---PRPPPSAPGPSQPPAA 189
P P P PP PRPPPS P P PPA+
Sbjct: 330 PPPRPLPPRPPAAQPRPPPSPPPPPPPPAS 359
Score = 32.3 bits (72), Expect = 0.29
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPS 184
P+ P P P AS PP PPP P PS
Sbjct: 348 PSPPPPPPPPASPLPPPPPPPPPTPS 373
Score = 30.8 bits (68), Expect = 0.84
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 163 PQPAPRASTPPPRPPPSAPGPSQP 186
P+P PPP PPP P P+ P
Sbjct: 337 PRPPAAQPRPPPSPPPPPPPPASP 360
Score = 29.3 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 163 PQPAPRASTPPPRPPPSAPGPSQPPAAGS 191
P P+P PPP P P P PP S
Sbjct: 346 PPPSPPPPPPPPASPLPPPPPPPPPTPSS 374
Score = 27.3 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 157 SRPAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
S P P PA PPP PPP+ ++ P
Sbjct: 349 SPPPPPPPPASPLPPPPPPPPPTPSSTTKLP 379
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 37.4 bits (85), Expect = 0.009
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 146 SKCSASSAISGSRPAVMPQPAPRASTP------PPRPPPSAPGPSQP-PAAGSGDAS 195
S +SS+ G P P+P RA++P PP PPPS G QP P+AGSG +
Sbjct: 84 SSSGSSSSRGGGAPVARPEPG-RAASPGSMVPGPPAPPPS--GDQQPAPSAGSGSTA 137
Score = 27.3 bits (59), Expect = 9.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 141 AGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPG--PSQPPAAG 190
AG G ++C+ S + + P PR + P R P P PS P AG
Sbjct: 163 AGEGRAQCAGSPSTA---------PRPRTCSSPGRATPHRPAGQPSHPGGAG 205
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 37.4 bits (85), Expect = 0.009
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 146 SKCSASSAISGSRPAVMPQPAPRASTP------PPRPPPSAPGPSQP-PAAGSGDAS 195
S +SS+ G P P+P RA++P PP PPPS G QP P+AGSG +
Sbjct: 84 SSSGSSSSRGGGAPVARPEPG-RAASPGSMVPGPPAPPPS--GDQQPAPSAGSGSTA 137
Score = 27.3 bits (59), Expect = 9.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 141 AGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPG--PSQPPAAG 190
AG G ++C+ S + + P PR + P R P P PS P AG
Sbjct: 163 AGEGRAQCAGSPSTA---------PRPRTCSSPGRATPHRPAGQPSHPGGAG 205
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 37.4 bits (85), Expect = 0.009
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 150 ASSAISGSRPAVMPQPAPR---ASTPPPRP-PPSAPGPSQPPAAGSGDASVATSARTAP 204
A+ A+ S P P P P AS P P P P +AP P+ PA+ S D + A +A AP
Sbjct: 2 ATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPAS-SSDPAAAAAATAAP 59
Score = 27.3 bits (59), Expect = 9.3
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 159 PAVMPQPA--PRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
PA P PA P +S+ P + P Q PA+ A A P+
Sbjct: 33 PAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPA 81
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 37.4 bits (85), Expect = 0.009
Identities = 16/34 (47%), Positives = 17/34 (50%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
P V P P A PPP PPP + G PP G G
Sbjct: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMIPPRGGDG 604
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 142 GSGFSKCSASSAISGSRP-AVMPQPAPRASTPPPRPPPSAPGP------SQPPAAGSGDA 194
GSG + + P +MP P P S PP PPPS P P QPP +
Sbjct: 457 GSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP-PPPSGPLPPWQQQQQQPPPPPPPSS 515
Query: 195 SVATS 199
S+A+S
Sbjct: 516 SMASS 520
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 115 GDPRQSKKGGRWD-------TASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPAP 167
GDP+ ++ R D + PV + + SG + +SA + PA P P
Sbjct: 298 GDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPS 357
Query: 168 RASTPPPRPPPSAPGPSQ 185
ST RPP GPS+
Sbjct: 358 LMSTTQSRPPWMNSGPSE 375
Score = 32.0 bits (71), Expect = 0.38
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 140 SAGSG----FSKCSASSAISGSRPAVMPQPAPRASTPPPRPP--PSAPGPSQPPAAGSGD 193
SAG+G + + A++A S P + P P +PP P AP P PP GS
Sbjct: 535 SAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAG 594
Query: 194 ASVATSARTAPS 205
+ PS
Sbjct: 595 MMIPPRGGDGPS 606
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.009
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 150 ASSAISGSRP-------AVMPQPAPRASTPPPRPPPSAPGPSQPPAAGS-GDASVATSAR 201
A ++G P +P+P P P PR PS P P QPP S GD+S+ +A
Sbjct: 775 APQTLAGGNPETAQPHAGTLPRPRP---VPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAP 831
Query: 202 TA 203
TA
Sbjct: 832 TA 833
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 12/105 (11%)
Query: 113 NTGDPRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASS-----AISGSRPAVMPQPAP 167
+ G Q G K PVS + A + AS A +GS M QP
Sbjct: 561 SAGILEQGPSPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHN 620
Query: 168 RASTPP-------PRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
A P +P P+ P P PP G S + +++ PS
Sbjct: 621 AAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPS 665
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 150 ASSAISGSRPAVMPQPAPRASTPPP----RPP--PSAPGPSQPPAAGSGDAS 195
+SS S P++ P+P R+ +PP +PP PSAP P S S
Sbjct: 655 SSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLS 706
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 37.4 bits (85), Expect = 0.009
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 150 ASSAISGSRP-------AVMPQPAPRASTPPPRPPPSAPGPSQPPAAGS-GDASVATSAR 201
A ++G P +P+P P P PR PS P P QPP S GD+S+ +A
Sbjct: 697 APQTLAGGNPETAQPHAGTLPRPRP---VPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAP 753
Query: 202 TA 203
TA
Sbjct: 754 TA 755
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 12/86 (13%)
Query: 132 KGPVSICLSAGSGFSKCSASS-----AISGSRPAVMPQPAPRASTPP-------PRPPPS 179
K PVS + A + AS A +GS M QP A P +P P+
Sbjct: 502 KDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPA 561
Query: 180 APGPSQPPAAGSGDASVATSARTAPS 205
P P PP G S + +++ PS
Sbjct: 562 PPKPGNPPPGHPGGQSSSGTSQHPPS 587
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 150 ASSAISGSRPAVMPQPAPRASTPPP----RPP--PSAPGPSQPPAAGSGDAS 195
+SS S P++ P+P R+ +PP +PP PSAP P S S
Sbjct: 577 SSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLS 628
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 163 PQPAPRASTPPP-----RPPPSAPGPSQPPAAGSGDASVA 197
PQP P A PPP +PPP PGP P AG + A
Sbjct: 7 PQPPPPAPPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGA 46
Score = 34.7 bits (78), Expect = 0.058
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 160 AVMPQPAPRASTPPPRPP-PSAPGPSQPPAAGSG 192
A PQP P PPP PP P P PP G+G
Sbjct: 2 ATNPQPQPPPPAPPPPPPQPQPQPPPPPPGPGAG 35
Score = 32.7 bits (73), Expect = 0.22
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDA 194
P P P P P P PPP PG + P A G+G A
Sbjct: 10 PPPAPPPPPPQPQPQPPPPPPGPG-AGPGAGGAGGA 44
Score = 30.8 bits (68), Expect = 0.84
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
P PQP P+ PPP PP GP A G+G
Sbjct: 15 PPPPPQPQPQ---PPPPPPGPGAGPGAGGAGGAG 45
Score = 28.5 bits (62), Expect = 4.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 163 PQPAPRASTPPPRP-PPSAPGPSQPPAAGSG 192
P P P+ PPP P P + PG AG+G
Sbjct: 17 PPPQPQPQPPPPPPGPGAGPGAGGAGGAGAG 47
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQ-PPAAGS 191
P + P P P PPP PPP P PSQ P+AGS
Sbjct: 626 PPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGS 659
Score = 35.4 bits (80), Expect = 0.034
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
P QP+P PPP PPP P P PP
Sbjct: 618 PYTASQPSPPLPPPPPPPPPPPPPPPPPP 646
Score = 33.5 bits (75), Expect = 0.13
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 163 PQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSART 202
P P P PPP PPP P S P A + V S T
Sbjct: 632 PPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTIT 671
Score = 33.1 bits (74), Expect = 0.17
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 160 AVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSA 200
A P P PPP PPP P P PP S ++A
Sbjct: 621 ASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAA 661
Score = 32.0 bits (71), Expect = 0.38
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 163 PQPAPRAST----PPPRPPPSAPGPSQPPAAGSGDASVATSARTA 203
P P P +S PPP P P+ P P P A+ + D S + +T+
Sbjct: 917 PPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTS 961
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 163 PQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAP 204
P P+P + PPP PP ++P P + SG TS ++P
Sbjct: 930 PPPSPVPAPPPPPPPTASPTPDK-----SGSPGKKTSKTSSP 966
Score = 30.0 bits (66), Expect = 1.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 161 VMPQPAPRASTPPPRPPPSAPGPSQPP 187
V P A + S P P PPP P P PP
Sbjct: 616 VTPYTASQPSPPLPPPPPPPPPPPPPP 642
Score = 28.1 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 171 TPPPRPPPSAPGPSQPPAAGSGDASVATSART 202
TPPP PP AP P Q P TS +T
Sbjct: 762 TPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKT 793
Score = 27.7 bits (60), Expect = 7.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 158 RPAVMPQPAPRASTPPPRPPPSAPG 182
+P ++ P PPP PPP PG
Sbjct: 698 KPQILVPPNGVVPPPPPPPPPPTPG 722
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 149 SASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSA 200
+A++A + + A PR PPP PP + PG +P AG+ A+ A +A
Sbjct: 103 AAAAAAAAAAAAATATAGPRGEAPPPPPPTARPG-ERPDGAGAAAAAAAAAA 153
Score = 28.1 bits (61), Expect = 5.5
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 15/91 (16%)
Query: 117 PRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSR---------PAVMPQPA- 166
P ++ G R D A + +A K S + +S SR P V P PA
Sbjct: 130 PPTARPGERPDGAGAAAAAAAAAAAAWDTLKISQAPQVSISRSKSYRENGAPFVPPPPAL 189
Query: 167 -----PRASTPPPRPPPSAPGPSQPPAAGSG 192
P T P A GP PAAG G
Sbjct: 190 DELGGPGGVTHPEERLGVAGGPGSAPAAGGG 220
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 37.4 bits (85), Expect = 0.009
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 149 SASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQP 186
S+S IS P P P P PPP PPP P P+ P
Sbjct: 2396 SSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2433
Score = 34.3 bits (77), Expect = 0.076
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 159 PAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSA 200
P P P P PPP PPP++P P+ P AS T+A
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTA 2452
Score = 33.9 bits (76), Expect = 0.099
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 115 GDPRQ-SKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAVMPQPA-PRASTP 172
G P+ +++ G A GP + G K A A G A P P + P
Sbjct: 416 GTPKPLAQQPGLQSPAKAPGPTKTPVQQ-PGPGKIPAQQAGPGKTSAQQTGPTKPPSQLP 474
Query: 173 -PPRPPPSAPGPSQPPAAGSGDA 194
P +PPP PGP++PP G A
Sbjct: 475 GPAKPPPQQPGPAKPPPQQPGSA 497
Score = 33.9 bits (76), Expect = 0.099
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 160 AVMPQPAPRASTPPPRPPPSAPGPSQPP 187
+ P P P PPP PPP P P PP
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPPPPPPLPP 2429
Score = 32.7 bits (73), Expect = 0.22
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 11/59 (18%)
Query: 140 SAGSGFSKCSASSAISGSRPAVMPQPA-PR----------ASTPPPRPPPSAPGPSQPP 187
++G F + +S + P+V PA PR ++ PPP PPP P P PP
Sbjct: 2362 TSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPP 2420
Score = 32.3 bits (72), Expect = 0.29
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 143 SGFSKCSASSAISGSRPAVMPQPA------PRASTPPPRPPPSAPGPSQPPAAGSGDASV 196
+G K SA P+ +P PA P + PPP+ P SA PSQ P +
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQ 513
Query: 197 ATSARTAP 204
A+ +P
Sbjct: 514 PGPAKPSP 521
Score = 31.6 bits (70), Expect = 0.49
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 164 QPAPRASTPPPRPPPSAPGPSQPPAAGSGDASVATSARTAPS 205
QP P + + P P AP PSQPP + G A AP+
Sbjct: 951 QPGPHSQSGPGAPMKQAPAPSQPPTS-QGPPKSTGQAPPAPA 991
Score = 30.4 bits (67), Expect = 1.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 145 FSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPP 187
F + S+ + P P P P PPP PPP P S P
Sbjct: 2393 FFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKP 2435
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 159 PAVMPQPAPRASTPPPRPP---PSAPGPSQPPAAGSG 192
P+ P P PP + P S PGP++PPA SG
Sbjct: 301 PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSG 337
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 163 PQPAPRASTPPP------RPPPSAPGPSQPPAAGSGDA 194
P P ++ PPP +P P PG ++PP+ G A
Sbjct: 500 PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 117 PRQSKKGGRWDTASRKGPVSICLSAGSGFSKCSASSAISGSRPAV-MPQPAPRASTPPPR 175
P + G ++ + GP ++ G G K A P + P P A P +
Sbjct: 371 PPAQQTGSEKPSSEQPGPKALAQPPGVG--KTPAQQPGPAKPPTQQVGTPKPLAQQPGLQ 428
Query: 176 PPPSAPGPSQPPAAGSGDASV 196
P APGP++ P G +
Sbjct: 429 SPAKAPGPTKTPVQQPGPGKI 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,879,226
Number of Sequences: 37866
Number of extensions: 670753
Number of successful extensions: 24354
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 826
Number of HSP's that attempted gapping in prelim test: 10821
Number of HSP's gapped (non-prelim): 10194
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.