Guide to the Human Genome
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Search of human proteins with 239755238

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]
         (142 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]           300   3e-82
gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo ...   300   3e-82
gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo ...   300   3e-82
gi|239755234 PREDICTED: similar to armadillo repeat containing 4...    44   6e-05
gi|239749766 PREDICTED: similar to armadillo repeat containing 4...    44   6e-05
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]                 34   0.036
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]                 34   0.036
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]                 34   0.036
gi|24586667 transcription factor-like protein 4 isoform gamma [H...    33   0.061
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...    32   0.18 
gi|78499633 phospholipase C, eta 2 [Homo sapiens]                      32   0.23 
gi|93588611 angiotensin II receptor-associated protein isoform e...    31   0.30 
gi|93588498 angiotensin II receptor-associated protein isoform c...    31   0.30 
gi|93588503 angiotensin II receptor-associated protein isoform d...    31   0.30 
gi|157671951 solute carrier family 4, anion exchanger, member 3 ...    31   0.39 
gi|157671953 solute carrier family 4, anion exchanger, member 3 ...    31   0.39 
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    30   0.52 
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            30   0.52 
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    30   0.52 
gi|57528101 hypothetical protein LOC728130 [Homo sapiens]              30   0.52 
gi|148806874 hypothetical protein LOC54754 [Homo sapiens]              30   0.52 
gi|150170710 hypothetical protein LOC728118 [Homo sapiens]             30   0.52 
gi|110431370 espin [Homo sapiens]                                      30   0.88 
gi|216548152 RNA pseudouridylate synthase domain containing 3 is...    30   0.88 
gi|216548145 RNA pseudouridylate synthase domain containing 3 is...    30   0.88 
gi|62122851 small proline-rich protein 2G [Homo sapiens]               30   0.88 
gi|113865921 hypothetical protein LOC441457 [Homo sapiens]             30   0.88 
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]            29   1.1  
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]            29   1.1  
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ...    29   1.1  

>gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score =  300 bits (767), Expect = 3e-82
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60
           MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG
Sbjct: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60

Query: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120
           ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC
Sbjct: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120

Query: 121 RAEHLPPVPRKGNQMPPTEGTH 142
           RAEHLPPVPRKGNQMPPTEGTH
Sbjct: 121 RAEHLPPVPRKGNQMPPTEGTH 142


>gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo
           sapiens]
          Length = 142

 Score =  300 bits (767), Expect = 3e-82
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60
           MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG
Sbjct: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60

Query: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120
           ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC
Sbjct: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120

Query: 121 RAEHLPPVPRKGNQMPPTEGTH 142
           RAEHLPPVPRKGNQMPPTEGTH
Sbjct: 121 RAEHLPPVPRKGNQMPPTEGTH 142


>gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo
           sapiens]
          Length = 142

 Score =  300 bits (767), Expect = 3e-82
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60
           MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG
Sbjct: 1   MSPESDRADSKSVESGATPTATSWISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60

Query: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120
           ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC
Sbjct: 61  ACAFAGRPLIDVKASGWLRRSPVGALPGAGFGAHATGQRGPHGATPLFSGSLGLQLPPPC 120

Query: 121 RAEHLPPVPRKGNQMPPTEGTH 142
           RAEHLPPVPRKGNQMPPTEGTH
Sbjct: 121 RAEHLPPVPRKGNQMPPTEGTH 142


>gi|239755234 PREDICTED: similar to armadillo repeat containing 4
           [Homo sapiens]
          Length = 362

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 25  ISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60
           ++ELQDGS H  L W CLGL   D +F  PLLL AG
Sbjct: 318 LTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAG 353


>gi|239749766 PREDICTED: similar to armadillo repeat containing 4
           [Homo sapiens]
          Length = 367

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 25  ISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60
           ++ELQDGS H  L W CLGL   D +F  PLLL AG
Sbjct: 323 LTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAG 358


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 16/76 (21%)

Query: 77  WLRRSPVGALPGAGFGAHATGQRGPH------GATPLFSG------SLGLQLPPPCRAEH 124
           W++  P    P    G H  G  GP       G+TP+ SG        G+  PPP     
Sbjct: 424 WMQPPP----PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP 479

Query: 125 LPPVPRKGNQMPPTEG 140
            PP P  G   PP  G
Sbjct: 480 PPPPPPSGQPPPPPSG 495


>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
          Length = 638

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 16/76 (21%)

Query: 77  WLRRSPVGALPGAGFGAHATGQRGPH------GATPLFSG------SLGLQLPPPCRAEH 124
           W++  P    P    G H  G  GP       G+TP+ SG        G+  PPP     
Sbjct: 424 WMQPPP----PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP 479

Query: 125 LPPVPRKGNQMPPTEG 140
            PP P  G   PP  G
Sbjct: 480 PPPPPPSGQPPPPPSG 495


>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
          Length = 639

 Score = 34.3 bits (77), Expect = 0.036
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 16/76 (21%)

Query: 77  WLRRSPVGALPGAGFGAHATGQRGPH------GATPLFSG------SLGLQLPPPCRAEH 124
           W++  P    P    G H  G  GP       G+TP+ SG        G+  PPP     
Sbjct: 424 WMQPPP----PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMP 479

Query: 125 LPPVPRKGNQMPPTEG 140
            PP P  G   PP  G
Sbjct: 480 PPPPPPSGQPPPPPSG 495


>gi|24586667 transcription factor-like protein 4 isoform gamma [Homo
           sapiens]
          Length = 298

 Score = 33.5 bits (75), Expect = 0.061
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 77  WLRRSPVGALPGAGFGAHATGQRGP--HGATPLFSGSLGLQLPPPCRAEHLPPVPRK 131
           W++ SPVGA  G G    A  +RG    GA+ L   S  L +P  CR +   P   K
Sbjct: 12  WVKASPVGAHAGEGRAGRARARRGAGRRGASLLSPKSPTLSVPRGCREDSSHPACAK 68


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
            potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 32.0 bits (71), Expect = 0.18
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 81   SPVGALPGAGFG--AHATGQ-RGPHGATPLFSGSLGLQLPPPCRAEHLPPVPRKGNQMPP 137
            SPVG  P  G     H+ G  R    A P  SGS G  L PP  +   P VP++    P 
Sbjct: 1015 SPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPL 1074

Query: 138  TEG 140
            T G
Sbjct: 1075 TPG 1077


>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
          Length = 1416

 Score = 31.6 bits (70), Expect = 0.23
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 87   PGAGFGAHATGQRGPHGATPLFSGSLGLQ--LPPPCRAEHLPPVPRKGNQMPP 137
            PG G    A  Q GP   +P  +  L  Q  LPP C  E +   P  G   PP
Sbjct: 966  PGPGPAPEAPAQEGPGSGSPRDTRPLSTQRPLPPLCSLETIAEEPAPGPGPPP 1018


>gi|93588611 angiotensin II receptor-associated protein isoform e
           [Homo sapiens]
          Length = 147

 Score = 31.2 bits (69), Expect = 0.30
 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 34  HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
           H ILR LCLG +    + R         C  AG        SGWL       LPG     
Sbjct: 56  HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 105

Query: 94  HATGQRGPHGATPLFSG 110
           H      PHG  PL+ G
Sbjct: 106 HLLPAGQPHGHGPLWRG 122


>gi|93588498 angiotensin II receptor-associated protein isoform c
           [Homo sapiens]
          Length = 111

 Score = 31.2 bits (69), Expect = 0.30
 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 34  HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
           H ILR LCLG +    + R         C  AG        SGWL       LPG     
Sbjct: 12  HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 61

Query: 94  HATGQRGPHGATPLFSG 110
           H      PHG  PL+ G
Sbjct: 62  HLLPAGQPHGHGPLWRG 78


>gi|93588503 angiotensin II receptor-associated protein isoform d
           [Homo sapiens]
          Length = 155

 Score = 31.2 bits (69), Expect = 0.30
 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 34  HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
           H ILR LCLG +    + R         C  AG        SGWL       LPG     
Sbjct: 56  HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 105

Query: 94  HATGQRGPHGATPLFSG 110
           H      PHG  PL+ G
Sbjct: 106 HLLPAGQPHGHGPLWRG 122


>gi|157671951 solute carrier family 4, anion exchanger, member 3
           isoform 1 [Homo sapiens]
          Length = 1232

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 71  DVKASGWLRRSPVGALPGAGFGAH-ATGQRGPHGATPLFSGSLGLQLPPPCRAEHLPPVP 129
           D K SG+  R+P  +   +  G H  T   GP GA P  +  LG    P     H P   
Sbjct: 430 DDKDSGFFPRNPSSSSMNSVLGNHHPTPSHGPDGAVPTMADDLG---EPAPLWPHDPDAK 486

Query: 130 RKGNQMPPTEG 140
            K   MP  +G
Sbjct: 487 EKPLHMPGGDG 497


>gi|157671953 solute carrier family 4, anion exchanger, member 3
           isoform 2 [Homo sapiens]
          Length = 1259

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 71  DVKASGWLRRSPVGALPGAGFGAH-ATGQRGPHGATPLFSGSLGLQLPPPCRAEHLPPVP 129
           D K SG+  R+P  +   +  G H  T   GP GA P  +  LG    P     H P   
Sbjct: 457 DDKDSGFFPRNPSSSSMNSVLGNHHPTPSHGPDGAVPTMADDLG---EPAPLWPHDPDAK 513

Query: 130 RKGNQMPPTEG 140
            K   MP  +G
Sbjct: 514 EKPLHMPGGDG 524


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 111 SLGLQLPPPCR-AEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP   A  LPP+  +GN  P  +G H
Sbjct: 274 SQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAH 306


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 111 SLGLQLPPPCR-AEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP   A  LPP+  +GN  P  +G H
Sbjct: 274 SQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAH 306


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 111 SLGLQLPPPCR-AEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP   A  LPP+  +GN  P  +G H
Sbjct: 274 SQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAH 306


>gi|57528101 hypothetical protein LOC728130 [Homo sapiens]
          Length = 557

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 111 SLGLQLPPPCR-AEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP   A  LPP+  +GN  P  +G H
Sbjct: 202 SQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAH 234


>gi|148806874 hypothetical protein LOC54754 [Homo sapiens]
          Length = 756

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 111 SLGLQLPPPCRAEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP  A  + P+   GN  P  +G H
Sbjct: 152 SHGLPLPPPPPAAQVAPIVSPGNARPWPQGAH 183


>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
          Length = 878

 Score = 30.4 bits (67), Expect = 0.52
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 111 SLGLQLPPPCR-AEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP   A  LPP+  +GN  P  +G H
Sbjct: 274 SQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAH 306


>gi|110431370 espin [Homo sapiens]
          Length = 854

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 110 GSLGLQLPPPCRAEHLPPVPRKGNQMPP 137
           G++G   PPP      PP P  G Q+PP
Sbjct: 423 GTIGKPTPPPPPPSFPPPPPPPGTQLPP 450


>gi|216548152 RNA pseudouridylate synthase domain containing 3
           isoform 2 [Homo sapiens]
          Length = 336

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 66  GRPLIDVKASGWLRRSPVGALP-GAGFGAHATGQRGPHGATPLFSGSLGLQ 115
           GR ++    SGW R   V  +P  AGFG  A  QR P G+    SG LG Q
Sbjct: 11  GRRVLGRFWSGWRRGLGVRPVPEDAGFGTEARHQRQPRGSCQR-SGPLGDQ 60


>gi|216548145 RNA pseudouridylate synthase domain containing 3
           isoform 1 [Homo sapiens]
          Length = 351

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 66  GRPLIDVKASGWLRRSPVGALP-GAGFGAHATGQRGPHGATPLFSGSLGLQ 115
           GR ++    SGW R   V  +P  AGFG  A  QR P G+    SG LG Q
Sbjct: 11  GRRVLGRFWSGWRRGLGVRPVPEDAGFGTEARHQRQPRGSCQR-SGPLGDQ 60


>gi|62122851 small proline-rich protein 2G [Homo sapiens]
          Length = 73

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 116 LPPPCRAEHLPPVPRKGNQMPPTE 139
           LPPPC  EH PP P + ++ PP +
Sbjct: 37  LPPPCPPEHCPPPPCQ-DKCPPVQ 59


>gi|113865921 hypothetical protein LOC441457 [Homo sapiens]
          Length = 492

 Score = 29.6 bits (65), Expect = 0.88
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 111 SLGLQLPPPCRAEHLPPVPRKGNQMPPTEGTH 142
           S GL LPPP  A  + P+   GN  P  +G H
Sbjct: 152 SHGLPLPPPPPAAQVAPIVSPGNAGPWPQGAH 183


>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 556

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 94  HATGQRGPHGATPLFSGSLGLQLPPPCRAEHLPPVPRK 131
           H  G+  P G TP      GL  PPP     LPP PR+
Sbjct: 430 HDQGRDAPPGPTP---ARRGLPRPPPPPPPPLPPPPRR 464


>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 94  HATGQRGPHGATPLFSGSLGLQLPPPCRAEHLPPVPRK 131
           H  G+  P G TP      GL  PPP     LPP PR+
Sbjct: 758 HDQGRDAPPGPTP---ARRGLPRPPPPPPPPLPPPPRR 792


>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
           sapiens]
          Length = 884

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 94  HATGQRGPHGATPLFSGSLGLQLPPPCRAEHLPPVPRK 131
           H  G+  P G TP      GL  PPP     LPP PR+
Sbjct: 758 HDQGRDAPPGPTP---ARRGLPRPPPPPPPPLPPPPRR 792


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.137    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,707,454
Number of Sequences: 37866
Number of extensions: 422754
Number of successful extensions: 1588
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 149
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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