Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 119226224
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo
sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo sapi... 518 e-147
gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo sapi... 284 4e-77
gi|31742492 Nedd4 binding protein 2 [Homo sapiens] 182 3e-46
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ... 167 1e-41
gi|157278100 phosphonoformate immuno-associated protein 5 isofor... 102 2e-22
gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo s... 65 5e-11
gi|146134388 YLP motif containing 1 [Homo sapiens] 54 9e-08
gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo sapi... 37 0.016
gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens] 37 0.016
gi|8923842 forkhead box J2 [Homo sapiens] 37 0.020
gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens] 37 0.020
gi|90903231 huntingtin [Homo sapiens] 35 0.059
gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens] 33 0.17
gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens] 33 0.17
gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens] 33 0.17
gi|109150431 ring finger protein 31 [Homo sapiens] 32 0.38
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 32 0.38
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 32 0.38
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 32 0.38
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 32 0.50
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 32 0.50
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 32 0.50
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 32 0.50
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens] 32 0.50
gi|169636435 caudal type homeobox 2 [Homo sapiens] 32 0.65
gi|5032187 transducer of ERBB2, 1 [Homo sapiens] 32 0.65
gi|66529407 tensin [Homo sapiens] 31 0.85
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 31 0.85
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 31 0.85
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 31 0.85
>gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo
sapiens]
Length = 243
Score = 518 bits (1335), Expect = e-147
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR 60
MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR
Sbjct: 1 MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR 60
Query: 61 QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN 120
QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN
Sbjct: 61 QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN 120
Query: 121 LHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVSREKIHRMKERYEHDV 180
LHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVSREKIHRMKERYEHDV
Sbjct: 121 LHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVSREKIHRMKERYEHDV 180
Query: 181 TFHSVLHAEKPSRMNRNQDRNNALPSNNARYWNSYTEFPNRRAHGGFTNESSYHRRGGCH 240
TFHSVLHAEKPSRMNRNQDRNNALPSNNARYWNSYTEFPNRRAHGGFTNESSYHRRGGCH
Sbjct: 181 TFHSVLHAEKPSRMNRNQDRNNALPSNNARYWNSYTEFPNRRAHGGFTNESSYHRRGGCH 240
Query: 241 HGY 243
HGY
Sbjct: 241 HGY 243
>gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo
sapiens]
Length = 173
Score = 284 bits (727), Expect = 4e-77
Identities = 134/143 (93%), Positives = 137/143 (95%)
Query: 1 MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR 60
MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR
Sbjct: 1 MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLAR 60
Query: 61 QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN 120
QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN
Sbjct: 61 QLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTN 120
Query: 121 LHAWEMKPYAVMALENNYEVIFR 143
LHAWEMKPYAVM + + +FR
Sbjct: 121 LHAWEMKPYAVMVFQTEQKNLFR 143
>gi|31742492 Nedd4 binding protein 2 [Homo sapiens]
Length = 1770
Score = 182 bits (461), Expect = 3e-46
Identities = 88/153 (57%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 44 LYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRA 103
L LLRGLPGSGK+ LAR LQ D P +I STDD+F+ +G Y+F+ +L EAHEWNQ RA
Sbjct: 442 LVLLRGLPGSGKSFLARTLQEDNPSGVILSTDDYFYI-NGQYQFDVKYLGEAHEWNQNRA 500
Query: 104 RKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHG 163
++A ISPIIIDNTNL AWEMKPY ++ ++ Y+V+FREPDT WKF +ELARRNIHG
Sbjct: 501 KEAFEKKISPIIIDNTNLQAWEMKPYVALSQKHKYKVLFREPDTWWKFKPKELARRNIHG 560
Query: 164 VSREKIHRMKERYEHDVTFHSVLHAEKPSRMNR 196
VS+EKI RM E Y+ V+ ++ + P ++ R
Sbjct: 561 VSKEKITRMLEHYQRFVSVPIIMSSSVPEKIER 593
>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
[Homo sapiens]
Length = 583
Score = 167 bits (422), Expect = 1e-41
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 38 HSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHE 97
+ +K L LLRGLPGSGKTTL+R L ++FSTDD+F +DG Y +N + L +AH+
Sbjct: 398 NKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDG-YRYNVNQLGDAHD 456
Query: 98 WNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELA 157
WNQ RA++A+ G SP+IIDNTN+ AWEMKPY +A+ Y V F EP+T WKF+ +EL
Sbjct: 457 WNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELE 516
Query: 158 RRNIHGVSREKIHRMKERYEHDVTFHSVLHAEKPS 192
+RN HGVSR+KI +M +RYE+ ++ V+++ +PS
Sbjct: 517 KRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS 551
>gi|157278100 phosphonoformate immuno-associated protein 5 isoform 1
[Homo sapiens]
Length = 752
Score = 102 bits (255), Expect = 2e-22
Identities = 46/90 (51%), Positives = 67/90 (74%)
Query: 103 ARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIH 162
A++A+ G SP+IIDNTN+ AWEMKPY +A+ Y V F EP+T WKF+ +EL +RN H
Sbjct: 33 AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH 92
Query: 163 GVSREKIHRMKERYEHDVTFHSVLHAEKPS 192
GVSR+KI +M +RYE+ ++ V+++ +PS
Sbjct: 93 GVSRKKIAQMLDRYEYQMSISIVMNSVEPS 122
>gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
sapiens]
Length = 421
Score = 65.1 bits (157), Expect = 5e-11
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 42 KHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQK 101
K L++LRGLPGSGK+TLAR + + + D + GA F EE ++
Sbjct: 50 KTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGA---RGAFSEEYKRLDED 106
Query: 102 RARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNI 161
A R I +++D+TN ++ MA + Y+V+ EP T W+ + +L +N
Sbjct: 107 LAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQ 166
Query: 162 HGVSREKIHRMKERYEHD 179
+S + + ++K E D
Sbjct: 167 WQLSADDLKKLKPGLEKD 184
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 54.3 bits (129), Expect = 9e-08
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 12 LSLQPQQQQQRQRPP---------RPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLA--- 59
LS QP + ++ P +PP R + P R + ++RGLPGSGKT +A
Sbjct: 1800 LSHQPPPAPRVEKKPESKNVDDILKPPGRESRPERI-----VVIMRGLPGSGKTHVAKLI 1854
Query: 60 --RQLQHDFPRALIFSTDDFFFREDGAYEFNPDF----------------LEEAHEWNQ- 100
++++ P + S DD+F E E +PD +EE + +
Sbjct: 1855 RDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKVKKKVMEYEYEAEMEETYRTSMF 1914
Query: 101 KRARKAMRNGISP-IIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARR 159
K +K + +G P II+D N + A +EV E + Q +R
Sbjct: 1915 KTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFEVYLAEMSA----DNQTCGKR 1970
Query: 160 NIHGVSREKIHRMKERYE 177
NIHG ++I++M + +E
Sbjct: 1971 NIHGRKLKEINKMADHWE 1988
>gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo
sapiens]
Length = 175
Score = 37.0 bits (84), Expect = 0.016
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 47 LRGLPGSGKTTLARQLQHDFPRALIFSTDDFF 78
+ G+ SGKTTLA+ LQ P + S DDFF
Sbjct: 8 ISGVTNSGKTTLAKNLQKHLPNCSVISQDDFF 39
>gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo
sapiens]
Length = 199
Score = 37.0 bits (84), Expect = 0.016
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 47 LRGLPGSGKTTLARQLQHDFPRALIFSTDDFF 78
+ G+ SGKTTLA+ LQ P + S DDFF
Sbjct: 8 ISGVTNSGKTTLAKNLQKHLPNCSVISQDDFF 39
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 36.6 bits (83), Expect = 0.020
Identities = 13/22 (59%), Positives = 20/22 (90%)
Query: 16 PQQQQQRQRPPRPPPRGTPPRR 37
PQQQQQ+Q+PP+PPP+ + P++
Sbjct: 298 PQQQQQQQQPPQPPPQQSQPQQ 319
>gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens]
Length = 581
Score = 36.6 bits (83), Expect = 0.020
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 6 LQSFGRLSLQPQQQQQRQRPPRPPPRGTPPR 36
L GRLS QQQQQ+Q+PP PPP P R
Sbjct: 169 LVPLGRLSRGEQQQQQQQQPPPPPPPPGPLR 199
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 35.0 bits (79), Expect = 0.059
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 15 QPQQQQQRQRPPRPPPRGTPPR 36
Q QQQQQ+Q+PP PPP PP+
Sbjct: 31 QQQQQQQQQQPPPPPPPPPPPQ 52
Score = 31.6 bits (70), Expect = 0.65
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 15 QPQQQQQRQRPPRPPPRGTPP 35
Q QQQQQ+Q+ P PPP PP
Sbjct: 30 QQQQQQQQQQQPPPPPPPPPP 50
Score = 29.6 bits (65), Expect = 2.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 15 QPQQQQQRQRPPRPPPRGTPP 35
Q QQQQQ+Q+ +PPP PP
Sbjct: 28 QQQQQQQQQQQQQPPPPPPPP 48
>gi|224586817 golgi apparatus protein 1 isoform 3 [Homo sapiens]
Length = 1179
Score = 33.5 bits (75), Expect = 0.17
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 15 QPQQQQQRQRPPRPP-PRGTPPRR 37
Q QQQQQ+ +PP+PP P G PP R
Sbjct: 77 QQQQQQQQPQPPQPPFPAGGPPAR 100
>gi|224586815 golgi apparatus protein 1 isoform 2 [Homo sapiens]
Length = 1192
Score = 33.5 bits (75), Expect = 0.17
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 15 QPQQQQQRQRPPRPP-PRGTPPRR 37
Q QQQQQ+ +PP+PP P G PP R
Sbjct: 77 QQQQQQQQPQPPQPPFPAGGPPAR 100
>gi|54633312 golgi apparatus protein 1 isoform 1 [Homo sapiens]
Length = 1203
Score = 33.5 bits (75), Expect = 0.17
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 15 QPQQQQQRQRPPRPP-PRGTPPRR 37
Q QQQQQ+ +PP+PP P G PP R
Sbjct: 77 QQQQQQQQPQPPQPPFPAGGPPAR 100
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 32.3 bits (72), Expect = 0.38
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 6 LQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHD 65
L R L+P +Q+ P P P P + S + L + LP G+ LA L +
Sbjct: 609 LTELQRQRLEPFRQRLWDSGPEPTPSWDGPDKQSLVRRLLAVYALPSWGRAELALSLLQE 668
Query: 66 FPR 68
PR
Sbjct: 669 TPR 671
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 32.3 bits (72), Expect = 0.38
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 15 QPQQQQQRQRPP--RPPPRGTPPR--RHSFRKHLYLLRGLPGSGKTTLARQLQHDFPR 68
QPQQQQQ+Q PP +PPP P+ R+ R+ R G+ + ++++D R
Sbjct: 936 QPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRER 993
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 32.3 bits (72), Expect = 0.38
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 15 QPQQQQQRQRPP--RPPPRGTPPR--RHSFRKHLYLLRGLPGSGKTTLARQLQHDFPR 68
QPQQQQQ+Q PP +PPP P+ R+ R+ R G+ + ++++D R
Sbjct: 943 QPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRER 1000
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 32.3 bits (72), Expect = 0.38
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 15 QPQQQQQRQRPP--RPPPRGTPPR--RHSFRKHLYLLRGLPGSGKTTLARQLQHDFPR 68
QPQQQQQ+Q PP +PPP P+ R+ R+ R G+ + ++++D R
Sbjct: 958 QPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRER 1015
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 32.0 bits (71), Expect = 0.50
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 15 QPQQQQQRQRPPRPPPRGTPPR 36
Q QQQQQ+Q PP P P+ PP+
Sbjct: 344 QQQQQQQQQPPPPPQPQPQPPQ 365
Score = 30.0 bits (66), Expect = 1.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 15 QPQQQQQRQRPPRPPPRGTP 34
Q QQQQQ+Q+ P PPP+ P
Sbjct: 342 QQQQQQQQQQQPPPPPQPQP 361
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 32.0 bits (71), Expect = 0.50
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 15 QPQQQQQRQRPPRPPPRGTPPR 36
Q QQQQQ+Q PP P P+ PP+
Sbjct: 352 QQQQQQQQQPPPPPQPQPQPPQ 373
Score = 30.0 bits (66), Expect = 1.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 15 QPQQQQQRQRPPRPPPRGTP 34
Q QQQQQ+Q+ P PPP+ P
Sbjct: 350 QQQQQQQQQQQPPPPPQPQP 369
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 32.0 bits (71), Expect = 0.50
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 15 QPQQQQQRQRPPRPPPRGTPPR 36
Q QQQQQ+Q PP P P+ PP+
Sbjct: 412 QQQQQQQQQPPPPPQPQPQPPQ 433
Score = 30.0 bits (66), Expect = 1.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 15 QPQQQQQRQRPPRPPPRGTP 34
Q QQQQQ+Q+ P PPP+ P
Sbjct: 410 QQQQQQQQQQQPPPPPQPQP 429
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 32.0 bits (71), Expect = 0.50
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 15 QPQQQQQRQRPPRPPPRGTPPR 36
Q QQQQQ+Q PP P P+ PP+
Sbjct: 414 QQQQQQQQQPPPPPQPQPQPPQ 435
Score = 30.0 bits (66), Expect = 1.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 15 QPQQQQQRQRPPRPPPRGTP 34
Q QQQQQ+Q+ P PPP+ P
Sbjct: 412 QQQQQQQQQQQPPPPPQPQP 431
>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
Length = 1962
Score = 32.0 bits (71), Expect = 0.50
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 15 QPQQQQQRQRPPRPP--PRGTPPR-RHSFRKHLYLLRG 49
QPQQQQ +Q+P P PR PPR RH K L L RG
Sbjct: 116 QPQQQQPQQQPQALPRYPREVPPRFRHQEHKQL-LKRG 152
Score = 28.1 bits (61), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 15 QPQQQQQRQRPPRPPPRGTP 34
QPQQQQQ+Q+P + P+ P
Sbjct: 94 QPQQQQQQQQPQQQQPQQQP 113
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 31.6 bits (70), Expect = 0.65
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 7 QSFGRLSLQPQQQQQRQRPPRPPPRGTPPR 36
+ + LQ QQQQQ +PP PPP+ P+
Sbjct: 242 RKINKKKLQQQQQQQPPQPPPPPPQPPQPQ 271
>gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
Length = 345
Score = 31.6 bits (70), Expect = 0.65
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 4 SFLQSFGRLSLQPQQQ-QQRQRPPRPPPRGTPPRRHSFRK 42
S + S L L QQQ QQ+Q+P +PPP PP++ +K
Sbjct: 224 SSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQK 263
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 31.2 bits (69), Expect = 0.85
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 17 QQQQQRQRPPRPPPR 31
QQQQQ+Q+ PRPPPR
Sbjct: 651 QQQQQQQQQPRPPPR 665
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 15 QPQQQQQ---RQRPPRPPPRGTPPRRHSFRKHLY----LLRGLPGSGKT 56
QPQQQ Q +Q PP PPP+ PP + + ++ +P SG T
Sbjct: 1678 QPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGST 1726
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 15 QPQQQQQ---RQRPPRPPPRGTPPRRHSFRKHLY----LLRGLPGSGKT 56
QPQQQ Q +Q PP PPP+ PP + + ++ +P SG T
Sbjct: 1678 QPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGST 1726
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 15 QPQQQQQ---RQRPPRPPPRGTPPRRHSFRKHLY----LLRGLPGSGKT 56
QPQQQ Q +Q PP PPP+ PP + + ++ +P SG T
Sbjct: 1678 QPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGST 1726
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,419,668
Number of Sequences: 37866
Number of extensions: 586928
Number of successful extensions: 4768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4161
Number of HSP's gapped (non-prelim): 477
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.