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Search of human proteins with 118601002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118601002 hypothetical protein LOC653316 [Homo sapiens]
(114 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118601002 hypothetical protein LOC653316 [Homo sapiens] 228 8e-61
gi|123701922 hypothetical protein LOC285596 [Homo sapiens] 140 2e-34
gi|118918431 hypothetical protein LOC202134 [Homo sapiens] 140 2e-34
gi|4504487 histidine rich calcium binding protein precursor [Hom... 32 0.083
gi|26667257 eyes absent 4 isoform d [Homo sapiens] 32 0.14
gi|98991763 eyes absent 4 isoform b [Homo sapiens] 32 0.14
gi|98991760 eyes absent 4 isoform a [Homo sapiens] 32 0.14
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 31 0.24
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 31 0.24
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 31 0.24
gi|45387951 transmembrane protein 108 [Homo sapiens] 30 0.32
gi|210147493 transmembrane protein 108 [Homo sapiens] 30 0.32
gi|47419907 T-box 3 protein isoform 2 [Homo sapiens] 30 0.54
gi|47419905 T-box 3 protein isoform 1 [Homo sapiens] 30 0.54
gi|21735566 mitogen-activated protein kinase kinase kinase 7 iso... 29 0.70
gi|4507361 mitogen-activated protein kinase kinase kinase 7 isof... 29 0.70
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 29 0.70
gi|72534720 IQ motif containing H isoform 1 [Homo sapiens] 29 0.92
gi|12232475 IQ motif containing H isoform 2 [Homo sapiens] 29 0.92
gi|7662354 MON1 homolog B [Homo sapiens] 29 0.92
gi|50845418 WNK lysine deficient protein kinase 3 isoform 1 [Hom... 28 1.2
gi|50845416 WNK lysine deficient protein kinase 3 isoform 2 [Hom... 28 1.2
gi|31415870 dedicator of cytokinesis 3 [Homo sapiens] 28 1.2
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens] 28 1.2
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens] 28 1.2
gi|119943102 CREB binding protein isoform b [Homo sapiens] 28 1.6
gi|119943104 CREB binding protein isoform a [Homo sapiens] 28 1.6
gi|194394141 nucleolar preribosomal-associated protein 1 [Homo s... 28 1.6
gi|91982772 mucin 17 [Homo sapiens] 28 1.6
gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 28 1.6
>gi|118601002 hypothetical protein LOC653316 [Homo sapiens]
Length = 114
Score = 228 bits (581), Expect = 8e-61
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVS 60
MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVS
Sbjct: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVS 60
Query: 61 EEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
EEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV
Sbjct: 61 EEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
>gi|123701922 hypothetical protein LOC285596 [Homo sapiens]
Length = 310
Score = 140 bits (353), Expect = 2e-34
Identities = 81/130 (62%), Positives = 88/130 (67%), Gaps = 34/130 (26%)
Query: 19 LRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHM---------- 68
L+EL Y+ ++ E +KTSLGVPQRGDLEDLEEH+PGQTVSEEATGVHM
Sbjct: 151 LQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAK 210
Query: 69 ------------------------MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEA 104
MQVDPAT AK+LEDSTITGSHQQMSASPSSAPAEEA
Sbjct: 211 SDLEDLEEHVPEQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEA 270
Query: 105 TEKTKVEEEV 114
TEKTKVEEEV
Sbjct: 271 TEKTKVEEEV 280
Score = 96.7 bits (239), Expect = 4e-21
Identities = 74/186 (39%), Positives = 83/186 (44%), Gaps = 72/186 (38%)
Query: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ----RGDL--------- 47
MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ G L
Sbjct: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI 60
Query: 48 ----------------------EDLEEHLP------------------------------ 55
E + EHLP
Sbjct: 61 LSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADAGTQTNGDLEDLEEHG 120
Query: 56 -GQTVSEEATGVHMMQVDPATPAKKL------EDSTITGSHQQMSASPSSAPAEEATEKT 108
GQTVSEEAT VH M+ DP T A+ L E S+ G + +S + +
Sbjct: 121 PGQTVSEEATEVHTMEGDPDTLAEFLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE 180
Query: 109 KVEEEV 114
+EE V
Sbjct: 181 DLEEHV 186
>gi|118918431 hypothetical protein LOC202134 [Homo sapiens]
Length = 387
Score = 140 bits (353), Expect = 2e-34
Identities = 81/130 (62%), Positives = 88/130 (67%), Gaps = 34/130 (26%)
Query: 19 LRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHM---------- 68
L+EL Y+ ++ E +KTSLGVPQRGDLEDLEEH+PGQTVSEEATGVHM
Sbjct: 228 LQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAK 287
Query: 69 ------------------------MQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEA 104
MQVDPAT AK+LEDSTITGSHQQMSASPSSAPAEEA
Sbjct: 288 SDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEA 347
Query: 105 TEKTKVEEEV 114
TEKTKVEEEV
Sbjct: 348 TEKTKVEEEV 357
Score = 99.4 bits (246), Expect = 6e-22
Identities = 75/186 (40%), Positives = 84/186 (45%), Gaps = 72/186 (38%)
Query: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ----RGDL--------- 47
MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ G L
Sbjct: 78 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI 137
Query: 48 ----------------------EDLEEHLP------------------------------ 55
E + EHLP
Sbjct: 138 LSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADTGIQTNGDLEDLEEHG 197
Query: 56 -GQTVSEEATGVHMMQVDPATPAKKL------EDSTITGSHQQMSASPSSAPAEEATEKT 108
GQTVSEEAT VHMM+ DP T A+ L E S+ G + +S + +
Sbjct: 198 PGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE 257
Query: 109 KVEEEV 114
+EE V
Sbjct: 258 DLEEHV 263
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 42 PQRGDLEDLEEHLPGQTVSEEATGVHMMQVD 72
P+ +ED +E L + SE+ GVHM+ D
Sbjct: 52 PRVASMEDYDEDLVQEASSEDVLGVHMVDKD 82
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 32.3 bits (72), Expect = 0.083
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 40 GVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSA 99
G QRG ++++ H PG TV ++ + H+ + D +K ED GSH++ SS
Sbjct: 451 GHGQRGSIKEMSHHPPGHTVVKDRS--HLRKDDSEEEKEKEED---PGSHEE--DDESSE 503
Query: 100 PAEEATEKTKVEEE 113
E+ T ++E
Sbjct: 504 QGEKGTHHGSRDQE 517
>gi|26667257 eyes absent 4 isoform d [Homo sapiens]
Length = 639
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 26 STWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTI 85
ST+ Y + T+ G P L+E LPG T G P+TP K L++ T
Sbjct: 288 STYGAYMTSNNTADGTPSSTSTYQLQESLPGLT---NQPGEFDTMQSPSTPIKDLDERTC 344
Query: 86 TGS 88
S
Sbjct: 345 RSS 347
>gi|98991763 eyes absent 4 isoform b [Homo sapiens]
Length = 616
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 26 STWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTI 85
ST+ Y + T+ G P L+E LPG T G P+TP K L++ T
Sbjct: 265 STYGAYMTSNNTADGTPSSTSTYQLQESLPGLT---NQPGEFDTMQSPSTPIKDLDERTC 321
Query: 86 TGS 88
S
Sbjct: 322 RSS 324
>gi|98991760 eyes absent 4 isoform a [Homo sapiens]
Length = 639
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 26 STWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTI 85
ST+ Y + T+ G P L+E LPG T G P+TP K L++ T
Sbjct: 288 STYGAYMTSNNTADGTPSSTSTYQLQESLPGLT---NQPGEFDTMQSPSTPIKDLDERTC 344
Query: 86 TGS 88
S
Sbjct: 345 RSS 347
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 5 DTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLE-EHLPGQTVSEEA 63
+ E+ +E +R+L R RE ++ +EA K L +R + E + + L Q E+
Sbjct: 421 ELEKRLEKQRELERQREEERRKDIER-REAAKQELERQRRLEWERIRRQELLNQKNREQE 479
Query: 64 TGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVE 111
+++++ LE + G HQQ+S ++ T+KT++E
Sbjct: 480 ---EIVRLNSKKKNLHLELEALNGKHQQISGRLQDVRLKKQTQKTELE 524
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 5 DTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLE-EHLPGQTVSEEA 63
+ E+ +E +R+L R RE ++ +EA K L +R + E + + L Q E+
Sbjct: 421 ELEKRLEKQRELERQREEERRKDIER-REAAKQELERQRRLEWERIRRQELLNQKNREQE 479
Query: 64 TGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVE 111
+++++ LE + G HQQ+S ++ T+KT++E
Sbjct: 480 ---EIVRLNSKKKNLHLELEALNGKHQQISGRLQDVRLKKQTQKTELE 524
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 30.8 bits (68), Expect = 0.24
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 5 DTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLE-EHLPGQTVSEEA 63
+ E+ +E +R+L R RE ++ +EA K L +R + E + + L Q E+
Sbjct: 421 ELEKRLEKQRELERQREEERRKDIER-REAAKQELERQRRLEWERIRRQELLNQKNREQE 479
Query: 64 TGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVE 111
+++++ LE + G HQQ+S ++ T+KT++E
Sbjct: 480 ---EIVRLNSKKKNLHLELEALNGKHQQISGRLQDVRLKKQTQKTELE 524
>gi|45387951 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 55 PGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVE 111
P Q + AT + P T +T+T H + S S APA AT +K E
Sbjct: 74 PSQAAAPMATPTPRAEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPE 130
>gi|210147493 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 55 PGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVE 111
P Q + AT + P T +T+T H + S S APA AT +K E
Sbjct: 74 PSQAAAPMATPTPRAEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPE 130
>gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]
Length = 743
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 70 QVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEE 112
++D A+P + +TI+ S + + A +P E T KVEE
Sbjct: 427 RLDKASPDSRHSPATISSSTRGLGAEERRSPVREGTAPAKVEE 469
>gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]
Length = 723
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 70 QVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKVEE 112
++D A+P + +TI+ S + + A +P E T KVEE
Sbjct: 407 RLDKASPDSRHSPATISSSTRGLGAEERRSPVREGTAPAKVEE 449
>gi|21735566 mitogen-activated protein kinase kinase kinase 7
isoform D [Homo sapiens]
Length = 491
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 16 LRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMM---QVD 72
++RL L + K+ E+ + SLG + +E L G+ +S + + +
Sbjct: 345 IKRLESKLLKNQAKQQSESGRLSLGASRGSSVESLPPTSEGKRMSADMSEIEARIAATTG 404
Query: 73 PATPAKK-LEDSTITGSHQQMSASPSSAPA 101
P ++ ++D T+TG+ +S SS+P+
Sbjct: 405 NGQPRRRSIQDLTVTGTEPGQVSSRSSSPS 434
>gi|4507361 mitogen-activated protein kinase kinase kinase 7 isoform
A [Homo sapiens]
Length = 579
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 16 LRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMM---QVD 72
++RL L + K+ E+ + SLG + +E L G+ +S + + +
Sbjct: 345 IKRLESKLLKNQAKQQSESGRLSLGASRGSSVESLPPTSEGKRMSADMSEIEARIAATTG 404
Query: 73 PATPAKK-LEDSTITGSHQQMSASPSSAPA 101
P ++ ++D T+TG+ +S SS+P+
Sbjct: 405 NGQPRRRSIQDLTVTGTEPGQVSSRSSSPS 434
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 29 KKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGS 88
K Y++ +KT +R DL LE H + ++ EA+ ++ +K+LE+
Sbjct: 531 KAYEKQIKTLQ--QEREDLNKLEVHT--EALAAEASKDRKLREQSEHYSKQLENELEGLK 586
Query: 89 HQQMSASPSSAPAEEATEKTKVEEEV 114
+Q+S SP E E TK++ ++
Sbjct: 587 QKQISYSPGVCSIEHQQEITKLKTDL 612
>gi|72534720 IQ motif containing H isoform 1 [Homo sapiens]
Length = 1027
Score = 28.9 bits (63), Expect = 0.92
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 18 RLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHL 54
R+R HL + W + + + +T + +P G + + EH+
Sbjct: 431 RIRAKHLAANWNRIRTSRRTIIHIPSLGYSQPVREHI 467
>gi|12232475 IQ motif containing H isoform 2 [Homo sapiens]
Length = 621
Score = 28.9 bits (63), Expect = 0.92
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 18 RLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHL 54
R+R HL + W + + + +T + +P G + + EH+
Sbjct: 183 RIRAKHLAANWNRIRTSRRTIIHIPSLGYSQPVREHI 219
>gi|7662354 MON1 homolog B [Homo sapiens]
Length = 547
Score = 28.9 bits (63), Expect = 0.92
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 42 PQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGS-HQQMSASPSSAP 100
P G EDLE+ + E GVH + DP + LE+ TGS + SPS P
Sbjct: 10 PAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPED--EGLEE---TGSKDKDQPPSPSPPP 64
Query: 101 AEEATEKT 108
EA T
Sbjct: 65 QSEALSST 72
>gi|50845418 WNK lysine deficient protein kinase 3 isoform 1 [Homo
sapiens]
Length = 1800
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 3 DKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEE 62
D+ D ++K +L+RLRE H+ QE + +L Q +L++L E L +++ +
Sbjct: 1524 DESEIEDEDLKVELQRLREKHI-------QEVV--NLQTQQNKELQELYERL--RSIKDS 1572
Query: 63 ATGVHMMQVDPATPAK 78
T + + PA+P +
Sbjct: 1573 KTQSTEIPLPPASPRR 1588
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 25 YSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDST 84
Y + QE K + GVP++GD L E V TP K+ E+++
Sbjct: 1396 YEKLQALQETCKENKGVPKQGD-----NFLSFSAACET-------DVSSVTPEKEFEETS 1443
Query: 85 ITGSHQQ 91
TGS Q
Sbjct: 1444 ATGSSMQ 1450
>gi|50845416 WNK lysine deficient protein kinase 3 isoform 2 [Homo
sapiens]
Length = 1743
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 3 DKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEE 62
D+ D ++K +L+RLRE H+ QE + +L Q +L++L E L +++ +
Sbjct: 1477 DESEIEDEDLKVELQRLREKHI-------QEVV--NLQTQQNKELQELYERL--RSIKDS 1525
Query: 63 ATGVHMMQVDPATPAK 78
T + + PA+P +
Sbjct: 1526 KTQSTEIPLPPASPRR 1541
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 25 YSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDST 84
Y + QE K + GVP++GD L E V TP K+ E+++
Sbjct: 1349 YEKLQALQETCKENKGVPKQGD-----NFLSFSAACET-------DVSSVTPEKEFEETS 1396
Query: 85 ITGSHQQ 91
TGS Q
Sbjct: 1397 ATGSSMQ 1403
>gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]
Length = 2030
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 39 LGVPQRGDL-EDLEEHL----PGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMS 93
LG GD EDL H+ P T V ++ A+P+ ST + Q ++
Sbjct: 1698 LGDGSMGDAPEDLYHHMQLAYPNPRYQGSVTNVSVLSSSQASPSSSSLSSTHSAPSQMIT 1757
Query: 94 ASPSSA 99
++PSSA
Sbjct: 1758 SAPSSA 1763
>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
Length = 274
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 29 KKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATG---VHMMQVDPATPAKKLEDSTI 85
+K E T+ P G D E G+T SEE G Q P PA E +
Sbjct: 115 EKKGEGTTTAEAAPATGSKPD-EPGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGS 173
Query: 86 TGSHQQMSASPSSAPAEEATEKTKVEE 112
+ AS ++P+ +A + EE
Sbjct: 174 AETESATKASTDNSPSSKAEDAPAKEE 200
>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
Length = 238
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 29 KKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATG---VHMMQVDPATPAKKLEDSTI 85
+K E T+ P G D E G+T SEE G Q P PA E +
Sbjct: 79 EKKGEGTTTAEAAPATGSKPD-EPGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGS 137
Query: 86 TGSHQQMSASPSSAPAEEATEKTKVEE 112
+ AS ++P+ +A + EE
Sbjct: 138 AETESATKASTDNSPSSKAEDAPAKEE 164
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 48 EDLEEHLPGQTVSEEATGV-----HMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAE 102
E +EE L G + +E T + M+VD P K+E S +AS S++P++
Sbjct: 982 EMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQ 1041
Query: 103 EATEKTKVEE 112
+ K EE
Sbjct: 1042 PRKKIFKPEE 1051
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 48 EDLEEHLPGQTVSEEATGV-----HMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAE 102
E +EE L G + +E T + M+VD P K+E S +AS S++P++
Sbjct: 1020 EMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQ 1079
Query: 103 EATEKTKVEE 112
+ K EE
Sbjct: 1080 PRKKIFKPEE 1089
>gi|194394141 nucleolar preribosomal-associated protein 1 [Homo
sapiens]
Length = 2271
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/76 (23%), Positives = 33/76 (43%)
Query: 15 QLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPA 74
QL L+ELH Y + +E L +P+ + PG+ A G ++Q+
Sbjct: 1104 QLEALQELHPYMEGAQLREVTLALLSLPETHLVTQQPTKSPGKERHLNALGKTLVQLLTC 1163
Query: 75 TPAKKLEDSTITGSHQ 90
+P +L+ + S +
Sbjct: 1164 SPQDQLQSGELLWSSE 1179
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 59 VSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEAT 105
VS EA+ + VD +TP +++++ + + ++ P+S+P+E T
Sbjct: 3353 VSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTT 3399
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 59 VSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKT 108
VS EA + VD +TP ++T + + + ++ P+S P+E T T
Sbjct: 937 VSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLT 986
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 60 SEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKV 110
S EA+ + VD +TP +++ + + + ++ P+S P+E +T T +
Sbjct: 525 SSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTNM 575
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 60 SEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKV 110
S EA+ V VD + P +++ + + ++++ P+S P+E +T T +
Sbjct: 2765 SSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSM 2815
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 59 VSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEAT 105
VS EA+ + VD +TP ++T + + + + P+S P+E T
Sbjct: 1409 VSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKT 1455
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 60 SEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEATEKTKV 110
S EA+ + VD +TP +++ + + ++ P+S P+E +T T +
Sbjct: 702 SSEASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSM 752
>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 73 PATPAKKLE---DSTITGSHQQMSASPSSAPAEE 103
PAT KK+ D+ + Q+ A+PS APA+E
Sbjct: 119 PATETKKVSHVADTKVNTKAQETEAAPSQAPADE 152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.122 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,728,438
Number of Sequences: 37866
Number of extensions: 208623
Number of successful extensions: 654
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 588
Number of HSP's gapped (non-prelim): 119
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.