Search of human proteins with 239754297

Search of human proteins with 239754297

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754297 PREDICTED: hypothetical protein [Homo sapiens]
         (175 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754297 PREDICTED: hypothetical protein [Homo sapiens]           363   e-101
gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo ...   363   e-101
gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo ...   363   e-101
gi|13376335 hypothetical protein LOC79946 [Homo sapiens]               44   9e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    41   6e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    41   6e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            41   6e-04
gi|239753867 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo ...    40   0.001
gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo ...    40   0.001
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    39   0.002
gi|59853099 dynamin 1 isoform 1 [Homo sapiens]                         39   0.003
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            38   0.005
gi|30181233 leucine-rich repeats and calponin homology (CH) doma...    37   0.007
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]           37   0.011
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               36   0.015
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]            35   0.025
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]            35   0.025
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]            35   0.025
gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]          35   0.025
gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]          35   0.025
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]     35   0.025
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.025
gi|239755879 PREDICTED: hypothetical protein XP_002344729 [Homo ...    35   0.043
gi|239750409 PREDICTED: hypothetical protein XP_002347416 [Homo ...    35   0.043
gi|239744709 PREDICTED: hypothetical protein XP_002343201 [Homo ...    35   0.043
gi|169178377 PREDICTED: hypothetical protein [Homo sapiens]            34   0.057

>gi|239754297 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score =  363 bits (933), Expect = e-101
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60
           MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP
Sbjct: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60

Query: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120
           ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ
Sbjct: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120

Query: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175
           PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR
Sbjct: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175


>gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo
           sapiens]
          Length = 175

 Score =  363 bits (933), Expect = e-101
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60
           MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP
Sbjct: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60

Query: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120
           ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ
Sbjct: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120

Query: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175
           PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR
Sbjct: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175


>gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo
           sapiens]
          Length = 175

 Score =  363 bits (933), Expect = e-101
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60
           MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP
Sbjct: 1   MNPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASP 60

Query: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120
           ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ
Sbjct: 61  ETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQ 120

Query: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175
           PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR
Sbjct: 121 PQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175


>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
          Length = 257

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 40/130 (30%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 48  SCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPAL--AARPAGRGPCAGRPRRC 105
           +C   +GR   +    ++  R  R    G PA   T  P    A  PA R     RPRR 
Sbjct: 92  ACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRW 151

Query: 106 GCRDPADSRARGCCQPQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAAS 165
             R     R  G C+P           APL +   S A  C  R  P P+P      AA+
Sbjct: 152 P-RAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAA 210

Query: 166 QYSRSSCCAR 175
               SSCC R
Sbjct: 211 ----SSCCRR 216


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 46/154 (29%), Positives = 56/154 (36%), Gaps = 13/154 (8%)

Query: 6   TEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGN--ARAPPRLSCSAPAGRTWASPETF 63
           TEVS      SR   A        R  P  +GSG   +  PPR S      R   +    
Sbjct: 67  TEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP 126

Query: 64  SSGSRRARRWPC-GAPACTRTLSPALAAR----PAGRGP----CAGRPRRCGCRDPADSR 114
             G   AR  P   AP      +P  AA     P  RG        RP R G + P  + 
Sbjct: 127 RPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTC 186

Query: 115 ARGCCQPQRLDVPLRLGQAPL--RAGTRSGAQDC 146
            R    P+R   P R    PL  R G+ +GA+ C
Sbjct: 187 RRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSC 220


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 46/154 (29%), Positives = 56/154 (36%), Gaps = 13/154 (8%)

Query: 6   TEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGN--ARAPPRLSCSAPAGRTWASPETF 63
           TEVS      SR   A        R  P  +GSG   +  PPR S      R   +    
Sbjct: 67  TEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP 126

Query: 64  SSGSRRARRWPC-GAPACTRTLSPALAAR----PAGRGP----CAGRPRRCGCRDPADSR 114
             G   AR  P   AP      +P  AA     P  RG        RP R G + P  + 
Sbjct: 127 RPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTC 186

Query: 115 ARGCCQPQRLDVPLRLGQAPL--RAGTRSGAQDC 146
            R    P+R   P R    PL  R G+ +GA+ C
Sbjct: 187 RRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSC 220


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 46/154 (29%), Positives = 56/154 (36%), Gaps = 13/154 (8%)

Query: 6   TEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGN--ARAPPRLSCSAPAGRTWASPETF 63
           TEVS      SR   A        R  P  +GSG   +  PPR S      R   +    
Sbjct: 67  TEVSGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGP 126

Query: 64  SSGSRRARRWPC-GAPACTRTLSPALAAR----PAGRGP----CAGRPRRCGCRDPADSR 114
             G   AR  P   AP      +P  AA     P  RG        RP R G + P  + 
Sbjct: 127 RPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTC 186

Query: 115 ARGCCQPQRLDVPLRLGQAPL--RAGTRSGAQDC 146
            R    P+R   P R    PL  R G+ +GA+ C
Sbjct: 187 RRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSC 220


>gi|239753867 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 215

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%)

Query: 49  CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91
           C    GRTWA        SPE    G R  R        RWP G  A     L P     
Sbjct: 11  CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70

Query: 92  PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129
           P G GP A  RPR      P D + RG C  QR+  PLR
Sbjct: 71  P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106


>gi|239748428 PREDICTED: hypothetical protein XP_002346657 [Homo
           sapiens]
          Length = 215

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%)

Query: 49  CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91
           C    GRTWA        SPE    G R  R        RWP G  A     L P     
Sbjct: 11  CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70

Query: 92  PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129
           P G GP A  RPR      P D + RG C  QR+  PLR
Sbjct: 71  P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106


>gi|239742361 PREDICTED: hypothetical protein XP_002342502 [Homo
           sapiens]
          Length = 215

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 37/99 (37%), Positives = 39/99 (39%), Gaps = 21/99 (21%)

Query: 49  CSAPAGRTWA--------SPETFSSGSRRAR--------RWPCGAPACTR-TLSPALAAR 91
           C    GRTWA        SPE    G R  R        RWP G  A     L P     
Sbjct: 11  CGGLGGRTWATRPLPGPHSPEFGLPGWRVRRGRREAQGARWPGGGAALLAGRLRPRRRWA 70

Query: 92  PAGRGPCAG-RPRRCGCRDPADSRARGCCQPQRLDVPLR 129
           P G GP A  RPR      P D + RG C  QR+  PLR
Sbjct: 71  P-GAGPVAACRPRAAAAGGPTDGKGRGSC--QRVAGPLR 106


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
           sapiens]
          Length = 2365

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 48/173 (27%), Positives = 64/173 (36%), Gaps = 16/173 (9%)

Query: 15  SSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAP----AGRTWASPETFSSGSRRA 70
           +SR S     T+ + R S  +  +  A +P R +   P    A R        SS +R  
Sbjct: 414 ASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRAT 473

Query: 71  R---RWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRA-----RGCCQPQ 122
           R   R  C      R  SP+ A R      CA R      R  + +RA     R  C  +
Sbjct: 474 RDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQR 533

Query: 123 RLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCAR 175
             D P     +P RA   +    CA+RD P  S      RA     R+SC  R
Sbjct: 534 --DNPR--ASSPNRAARDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQR 582



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 51/186 (27%), Positives = 68/186 (36%), Gaps = 16/186 (8%)

Query: 2   NPIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAP----AGRTW 57
           NP  +     +  +SR S     T+ + R S  +  +  A +P R +   P    A R  
Sbjct: 450 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDN 509

Query: 58  ASPETFSSGSRRAR---RWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSR 114
                 SS +R  R   R  C      R  SP  AAR      CA R      R  + +R
Sbjct: 510 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAARDNPTTSCAQRDNPRASRTSSPNR 569

Query: 115 A-----RGCCQPQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSR 169
           A     R  C  +  D P     +P RA   +    CA+RD P  S      RA     R
Sbjct: 570 ATRDNPRTSCAQR--DNPR--ASSPNRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPR 625

Query: 170 SSCCAR 175
           +SC  R
Sbjct: 626 TSCAQR 631



 Score = 35.0 bits (79), Expect = 0.033
 Identities = 49/181 (27%), Positives = 60/181 (33%), Gaps = 30/181 (16%)

Query: 22  TLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGA---P 78
           T +TQ    Q+   T +   R  PR  C        +SP   +   R   R  C     P
Sbjct: 356 TSSTQQDNPQTSFPTCTPQ-RENPRTPCVQQDDPRASSPNRTTQ--RENSRTSCAQRDNP 412

Query: 79  ACTRTLSPALAARPAGRGPCAGR--PRRCG-CRDPADSRARGCCQ-----PQRLDVPLRL 130
             +RT SP  A R   R  CA R  PR     R   D+    C Q       R   P R 
Sbjct: 413 KASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRA 472

Query: 131 ----------------GQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSSCCA 174
                             +P RA   +    CA+RD P  S      RA     R+SC  
Sbjct: 473 TRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQ 532

Query: 175 R 175
           R
Sbjct: 533 R 533



 Score = 28.1 bits (61), Expect = 4.1
 Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 39   GNARAPPRLSCSAPAGRTWASPETFSSGSRRARR-WPCGAPACTRTLSPALAARPAGRGP 97
            G    P + S S P G   A+P    S + +++      +PACT T  P +      RGP
Sbjct: 1617 GTNDVPEQESHSQPEGWAEATPVNGHSPALQSQSPVQLPSPACTSTQWPKIKVT---RGP 1673

Query: 98   CAGRPRRCGCRDPADSR--ARGCCQPQRLDVPLR-------LGQAPLRAGTRSGAQDCAR 148
                        P  SR  A+G   P+    P          GQ PL    ++ + D   
Sbjct: 1674 ATATLAGLEQTGPLGSRSTAKGPSLPELQFQPEEPEESEPSRGQDPLTDQKQADSADKRP 1733

Query: 149  RDLPAPSPLQGRL 161
             +  A SPL+GRL
Sbjct: 1734 AEGKAGSPLKGRL 1746


>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
          Length = 864

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 52  PAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRP---RRCGCR 108
           P   +W   ++  +G    RR P  +P   R       ARP  RGP  G P      G  
Sbjct: 757 PVDDSWLQVQSVPAG----RRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGGA 812

Query: 109 DPADSRARGCCQP--QRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAP 154
            P  SR      P      VP R  +AP    +RSG    +R + P P
Sbjct: 813 PPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPSRSGQASPSRPESPRP 860


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 49/163 (30%), Positives = 58/163 (35%), Gaps = 39/163 (23%)

Query: 38  SGNARAPPRLSCSAPA----------GRTWASPETFSS-------GSRRARRWPC----- 75
           S  ARAPP +   AP           G  WA+  T          GSRR  R P      
Sbjct: 37  SPTARAPPPI-LPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREA 95

Query: 76  ------GAP----ACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQPQRLD 125
                 GAP    +C R   P     P+  G    RP       P   R+   C P+ + 
Sbjct: 96  SPGPAPGAPRARGSCGREPGPRRRRAPSSAGK---RPAAAARAAPPRQRSLARCLPRSVG 152

Query: 126 VPLRLG---QAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAAS 165
             +R       P R   R     C RR LP P PLQ RL +AS
Sbjct: 153 SCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSAS 195


>gi|30181233 leucine-rich repeats and calponin homology (CH) domain
           containing 4 [Homo sapiens]
          Length = 683

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 43/154 (27%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 25  TQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARR-------WPCGA 77
           T   +R   L  G+G+    P      PAG     P+T      R RR       W  GA
Sbjct: 370 TVEEQRPPELSPGAGDRERAPSSRREEPAGEERRRPDTLQLWQERERRQQQQSGAW--GA 427

Query: 78  PACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARGCCQPQRLDVPLRLGQAPLRA 137
           P     L P L A   G    + +    G    + S+A G    Q    P    Q PL  
Sbjct: 428 PRKDSLLKPGLRAVVGGAAAVSTQAMHNGSPKSSASQA-GAAAGQGAPAPAPASQEPLPI 486

Query: 138 GTRSGAQDCARRDLPAPSPLQGRLRAASQYSRSS 171
              + A        PAP PL    R  S   RSS
Sbjct: 487 AGPATA--------PAPRPLGSIQRPNSFLFRSS 512


>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 42/127 (33%), Positives = 46/127 (36%), Gaps = 26/127 (20%)

Query: 35  ETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAG 94
           E G G AR  P  +   P+GR      T   GS              +   P  A R + 
Sbjct: 206 EGGGGGARPSPPRARQPPSGRP-RPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS 264

Query: 95  RG-------PCAGRPRRCGCRD--PADSRARGCCQPQRLDVPLRLGQAPLRAGTRS---G 142
           RG         A RP R G R    AD RARG C             A LRAGT S   G
Sbjct: 265 RGRGAATSVSAAARPTRGGARGHRRADGRARGGC-------------AQLRAGTPSAPGG 311

Query: 143 AQDCARR 149
            QDC  R
Sbjct: 312 LQDCRGR 318


>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 42/127 (33%), Positives = 46/127 (36%), Gaps = 26/127 (20%)

Query: 35  ETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAG 94
           E G G AR  P  +   P+GR      T   GS              +   P  A R + 
Sbjct: 206 EGGGGGARPSPPRARQPPSGRP-RPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS 264

Query: 95  RG-------PCAGRPRRCGCRD--PADSRARGCCQPQRLDVPLRLGQAPLRAGTRS---G 142
           RG         A RP R G R    AD RARG C             A LRAGT S   G
Sbjct: 265 RGRGAATSVSAAARPTRGGARGHRRADGRARGGC-------------AQLRAGTPSAPGG 311

Query: 143 AQDCARR 149
            QDC  R
Sbjct: 312 LQDCRGR 318


>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 42/127 (33%), Positives = 46/127 (36%), Gaps = 26/127 (20%)

Query: 35  ETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAG 94
           E G G AR  P  +   P+GR      T   GS              +   P  A R + 
Sbjct: 206 EGGGGGARPSPPRARQPPSGRP-RPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS 264

Query: 95  RG-------PCAGRPRRCGCRD--PADSRARGCCQPQRLDVPLRLGQAPLRAGTRS---G 142
           RG         A RP R G R    AD RARG C             A LRAGT S   G
Sbjct: 265 RGRGAATSVSAAARPTRGGARGHRRADGRARGGC-------------AQLRAGTPSAPGG 311

Query: 143 AQDCARR 149
            QDC  R
Sbjct: 312 LQDCRGR 318


>gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]
          Length = 1180

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)

Query: 57   WASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRAR 116
            W   E+ S+ +    R P G P       P+L + P   GPCAG+PR          R+R
Sbjct: 1043 WRRGESDSAETNFQDRTPIGGPG---PRGPSLRSHPRS-GPCAGKPRA--------PRSR 1090

Query: 117  GCCQP--QRLDVP--LRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSR 169
            G  +P  +R+  P     G A   A TR+     AR + P  + + G   AA+   R
Sbjct: 1091 GAAEPPSRRVAAPGVGTAGGANKAAATRAAQARDARSERPRRAFVSGGAGAAAAAGR 1147


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 41/143 (28%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 35  ETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAG 94
           E     A  P   S   P     A PE  SS  RRAR  P   P+    ++   + RP G
Sbjct: 175 EVVGARAAVPRSFSAPYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAVA-MRSPRPCG 233

Query: 95  RGPCAGRPRRCGCRDPADS---------RARGCCQPQRLDVPLRLGQAPLRAGTRSGAQD 145
           R P    P   G   P D          R RG  QP+          +P  A      Q+
Sbjct: 234 RPP-TDSPDAGGAGRPLDGYISALLRRRRRRGAGQPR---------TSPGGADGGPRRQN 283

Query: 146 CARRDLPAPSPLQGRLRAASQYS 168
             R+  P  SP  G  R A + S
Sbjct: 284 SVRQRPPDASPSPGSARPAREPS 306



 Score = 27.7 bits (60), Expect = 5.3
 Identities = 44/159 (27%), Positives = 59/159 (37%), Gaps = 18/159 (11%)

Query: 27  SHRRQSPLETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSP 86
           + R+  PL  G    ++PPR    A   R   +  +   GS RAR+          +L  
Sbjct: 375 ARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARK--ASRSQSETSLLG 432

Query: 87  ALAARPAG---------RGPCAGRPRRCGCRDPADSRARGCCQPQRLDVPLRLGQAPLRA 137
             +A P+G           P   RPRR G      ++A G C+  R    +       R 
Sbjct: 433 RASAVPSGPPKYPTAEREEPRPPRPRR-GPAPTLAAQAAGSCRRWRSTAEIDAADG-RRV 490

Query: 138 GTRSGAQDCARRDLPAPSPL--QGRLRAASQYSRSSCCA 174
             R+ A   AR   P PSP   Q RL      S S C A
Sbjct: 491 RPRAPA---ARVPGPGPSPSAPQRRLLYGCAGSDSECSA 526


>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 42  RAPPRLSCSAPAGRTWASPETFSSGSRRAR----RWP-CGAPACTRTLSPALAARPAGRG 96
           RA P         R+ + P   ++ +R +     RWP   A ACT  LSP       G  
Sbjct: 53  RAAPLPGSLGARSRSHSGPPATAAAARASGHAHGRWPRSAATACTLRLSPW-----PGGA 107

Query: 97  PCAGRPRRCGCRDPADSRARGCCQ-------PQRLDVPLRLGQAPLRAGTRSGAQDCARR 149
            C  RPR    R P    A   C        P+R   P R G  PL        + CA R
Sbjct: 108 SCHHRPRYHLRRRPQPHGAASSCSLPRCRLCPERSAPPRRRGPPPLPTSCHWARRSCALR 167


>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 42  RAPPRLSCSAPAGRTWASPETFSSGSRRAR----RWP-CGAPACTRTLSPALAARPAGRG 96
           RA P         R+ + P   ++ +R +     RWP   A ACT  LSP       G  
Sbjct: 53  RAAPLPGSLGARSRSHSGPPATAAAARASGHAHGRWPRSAATACTLRLSPW-----PGGA 107

Query: 97  PCAGRPRRCGCRDPADSRARGCCQ-------PQRLDVPLRLGQAPLRAGTRSGAQDCARR 149
            C  RPR    R P    A   C        P+R   P R G  PL        + CA R
Sbjct: 108 SCHHRPRYHLRRRPQPHGAASSCSLPRCRLCPERSAPPRRRGPPPLPTSCHWARRSCALR 167


>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 42  RAPPRLSCSAPAGRTWASPETFSSGSRRAR----RWP-CGAPACTRTLSPALAARPAGRG 96
           RA P         R+ + P   ++ +R +     RWP   A ACT  LSP       G  
Sbjct: 53  RAAPLPGSLGARSRSHSGPPATAAAARASGHAHGRWPRSAATACTLRLSPW-----PGGA 107

Query: 97  PCAGRPRRCGCRDPADSRARGCCQ-------PQRLDVPLRLGQAPLRAGTRSGAQDCARR 149
            C  RPR    R P    A   C        P+R   P R G  PL        + CA R
Sbjct: 108 SCHHRPRYHLRRRPQPHGAASSCSLPRCRLCPERSAPPRRRGPPPLPTSCHWARRSCALR 167


>gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]
          Length = 531

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 73  WPC----GAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRA 115
           WPC    GAP C RT  P       GR P   +PR C C +    RA
Sbjct: 168 WPCQPGTGAPTCPRTPKPT----SRGRNPLVEQPRACACGEAFAWRA 210


>gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]
          Length = 531

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 73  WPC----GAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRA 115
           WPC    GAP C RT  P       GR P   +PR C C +    RA
Sbjct: 168 WPCQPGTGAPTCPRTPKPT----SRGRNPLVEQPRACACGEAFAWRA 210


>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
          Length = 494

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 31  QSPLETGSGNARAPPRLSCSAPAGRTWASPETFSSGSRRARRWPCGAPACTRTLSPALAA 90
           +SPL   S  +R PP  SCS+ +     S    S  S  A   P GAP C  + + A AA
Sbjct: 275 ESPLLLDSPTSRTPPPPSCSSASS---CSSSASSCSSASAASTPSGAPTCCASAAAAAAA 331


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 17/173 (9%)

Query: 5   PTEVSATSLVSSRMSIATLTTQSHRR---QSPLETGSGNARAPPRLS----CSAPAGRTW 57
           PT   + S   +R   +   T + RR   +SP+   S  +R+P R S       PA R  
Sbjct: 599 PTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRS-RSRSPARRSGRSRSRTPARRGR 657

Query: 58  ASPETFSSGSRRARRWPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSRARG 117
           +   T +   R   R P      +R+ +PA   R   R P  GR R         S +R 
Sbjct: 658 SRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSR- 716

Query: 118 CCQPQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRS 170
                    P R G++   +  ++ ++   RR     SP   + R +S+ SRS
Sbjct: 717 --------TPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS 761



 Score = 27.3 bits (59), Expect = 6.9
 Identities = 39/176 (22%), Positives = 59/176 (33%), Gaps = 22/176 (12%)

Query: 3   PIPTEVSATSLVSSRMSIATLTTQSHRRQSPLETGSGNARAPPRLSCSAPAGRTWASPET 62
           P PT + A     S   +AT          P E      R+PP+     P   +  S   
Sbjct: 364 PAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPP 423

Query: 63  FSSGSRRARR--------WPCGAPACTRTLSPALAARPAGRGPCAGRPRRCGCRDPADSR 114
               ++ +R          P  AP   R +S    + P  +    GR +R        SR
Sbjct: 424 SPQPTKVSRHASSSPESPKPAPAPGSHREIS----SSPTSKNRSHGRAKRDKSHSHTPSR 479

Query: 115 ARGCCQPQRLDVPLRLGQAPLRAGTRSGAQDCARRDLPAPSPLQGRLRAASQYSRS 170
             G     R     + G++  R  T+ G          + SP   R R+A ++ RS
Sbjct: 480 RMG---RSRSPATAKRGRSRSRTPTKRGHS-------RSRSPQWRRSRSAQRWGRS 525


>gi|239755879 PREDICTED: hypothetical protein XP_002344729 [Homo
           sapiens]
          Length = 90

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 18/88 (20%)

Query: 51  APAGRTWASPET---------------FSSGSRRARRWPCGAPACTRTLSPALAARPAGR 95
           +P G T+++ ET               F  GS  A R P      +R  SP LAARPA  
Sbjct: 2   SPKGTTFSTTETRALEPAWGALPPAADFDPGSPVASR-PLSRTRPSRIRSPELAARPAPL 60

Query: 96  GPCAGRPRRCGCRDPADSRARGCCQPQR 123
             CAG  RR   R PA        QP+R
Sbjct: 61  --CAGADRRSPGRPPAGPSPGNTHQPER 86


>gi|239750409 PREDICTED: hypothetical protein XP_002347416 [Homo
           sapiens]
          Length = 90

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 18/88 (20%)

Query: 51  APAGRTWASPET---------------FSSGSRRARRWPCGAPACTRTLSPALAARPAGR 95
           +P G T+++ ET               F  GS  A R P      +R  SP LAARPA  
Sbjct: 2   SPKGTTFSTTETRALEPAWGALPPAADFDPGSPVASR-PLSRTRPSRIRSPELAARPAPL 60

Query: 96  GPCAGRPRRCGCRDPADSRARGCCQPQR 123
             CAG  RR   R PA        QP+R
Sbjct: 61  --CAGADRRSPGRPPAGPSPGNTHQPER 86


>gi|239744709 PREDICTED: hypothetical protein XP_002343201 [Homo
           sapiens]
          Length = 90

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 18/88 (20%)

Query: 51  APAGRTWASPET---------------FSSGSRRARRWPCGAPACTRTLSPALAARPAGR 95
           +P G T+++ ET               F  GS  A R P      +R  SP LAARPA  
Sbjct: 2   SPKGTTFSTTETRALEPAWGALPPAADFDPGSPVASR-PLSRTRPSRIRSPELAARPAPL 60

Query: 96  GPCAGRPRRCGCRDPADSRARGCCQPQR 123
             CAG  RR   R PA        QP+R
Sbjct: 61  --CAGADRRSPGRPPAGPSPGNTHQPER 86


>gi|169178377 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 34.3 bits (77), Expect = 0.057
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 71  RRWPCGA--PACTRTLSPALAARPAGRGPCAGRPRRCGCRDP-----ADSRARGCCQPQR 123
           +RW   A  PA    + PA +AR AG  P  GRP R   ++P        RA G      
Sbjct: 6   QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARL-LKEPRRGIQRGHRAAGAADDSV 64

Query: 124 LDVPLRLGQAPLRAGTRSGAQD 145
             +PL      L  GT+ GA +
Sbjct: 65  TSLPLTNTAKGLGLGTQKGAAE 86


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.129    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,209,563
Number of Sequences: 37866
Number of extensions: 472016
Number of successful extensions: 2421
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 2254
Number of HSP's gapped (non-prelim): 423
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.