Search of human proteins with 239754132

Search of human proteins with 239754132

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]           434   e-122
gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo ...   434   e-122
gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo ...   434   e-122
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            46   2e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            46   2e-05
gi|29826341 calmodulin binding transcription activator 2 [Homo s...    42   4e-04
gi|153281158 dual specificity phosphatase 8 [Homo sapiens]             41   7e-04
gi|239753749 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|239748226 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|239742127 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    40   0.002
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi...    40   0.002
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi...    40   0.002
gi|166795252 hypothetical protein LOC23359 [Homo sapiens]              40   0.002
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             40   0.002
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]            39   0.004
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            39   0.004
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ...    39   0.004
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ...    39   0.004
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    39   0.004
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]             38   0.006
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]              38   0.006
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]            37   0.010
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            37   0.013
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...    37   0.017
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]            37   0.017
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]            36   0.022
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]            36   0.022
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      35   0.038

>gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score =  434 bits (1117), Expect = e-122
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60
           MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA
Sbjct: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60

Query: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120
           PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP
Sbjct: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120

Query: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180
           HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR
Sbjct: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180

Query: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217
           GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF
Sbjct: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217


>gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo
           sapiens]
          Length = 217

 Score =  434 bits (1117), Expect = e-122
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60
           MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA
Sbjct: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60

Query: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120
           PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP
Sbjct: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120

Query: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180
           HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR
Sbjct: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180

Query: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217
           GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF
Sbjct: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217


>gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo
           sapiens]
          Length = 217

 Score =  434 bits (1117), Expect = e-122
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60
           MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA
Sbjct: 1   MRGEPKRVCSSVMAVSEASFTKRICKGGSNVKLIQLLAELFPRQPVRASSTSSRLLRAPA 60

Query: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120
           PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP
Sbjct: 61  PPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTP 120

Query: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180
           HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR
Sbjct: 121 HARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180

Query: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217
           GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF
Sbjct: 181 GTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSVF 217


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 45/126 (35%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPS-PKSGRRPRRRVGKPGEH 100
           PR  V A +  S L R  APPP     A P   P  G +R   P++G RP   V  PG  
Sbjct: 48  PRGAVSAGAPGSPLYRVSAPPP-----APPPPPPPGGPSRSERPRAGLRPGAFVS-PGPL 101

Query: 101 GAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGIS--RAGPGSPS 158
           G     RR    SC G      R+  S    SAA+ G PA  A   P +     GP SP 
Sbjct: 102 G-----RRA---SCSGRAGSAGRLRCSAAALSAAQRGGPA-RAQVPPALRTFSPGPASPP 152

Query: 159 MLLPAG 164
              P G
Sbjct: 153 RASPGG 158


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 45/126 (35%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPS-PKSGRRPRRRVGKPGEH 100
           PR  V A +  S L R  APPP     A P   P  G +R   P++G RP   V  PG  
Sbjct: 48  PRGAVSAGAPGSPLYRVSAPPP-----APPPPPPPGGPSRSERPRAGLRPGAFVS-PGPL 101

Query: 101 GAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGIS--RAGPGSPS 158
           G     RR    SC G      R+  S    SAA+ G PA  A   P +     GP SP 
Sbjct: 102 G-----RRA---SCSGRAGSAGRLRCSAAALSAAQRGGPA-RAQVPPALRTFSPGPASPP 152

Query: 159 MLLPAG 164
              P G
Sbjct: 153 RASPGG 158


>gi|29826341 calmodulin binding transcription activator 2 [Homo
           sapiens]
          Length = 1202

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 45/167 (26%), Positives = 59/167 (35%), Gaps = 31/167 (18%)

Query: 56  LRAPAPPPRLKIHAGPALSPDSG--------QARPSPKSGRRPRRRVGKPGEHGAFSLVR 107
           L AP PP   K H  P+ S  S         + RPSP + R      G     G   L+ 
Sbjct: 275 LIAPLPPELPKAHTSPSSSSSSSSSGFAEPLEIRPSPPTSR------GGSSRGGTAILLL 328

Query: 108 RGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLL 167
            GL +  GG LTP   +        +    V  G+  + P      P  PS        L
Sbjct: 329 TGLEQRAGG-LTPTRHLAPQADPRPSMSLAVVVGTEPSAP------PAPPSPAFDPDRFL 381

Query: 168 LTAERSFTWGGRRGTEKNPPGKWTGLAP----------GPGAAALGP 204
            + +R  T+GG +G   + P       P           P AAA GP
Sbjct: 382 NSPQRGQTYGGGQGVSPDFPEAEAAHTPCSALEPAAALEPQAAARGP 428


>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
          Length = 625

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 53/179 (29%), Positives = 68/179 (37%), Gaps = 33/179 (18%)

Query: 46  VRASSTSSRLLRAPAPPP--------RLKIHAGPAL-----SPDSGQARPS--PKSGRRP 90
           ++++   SR    P PP         +L   +G AL     SPDS  A P   P+  RRP
Sbjct: 398 IKSAYAPSRRPDGPGPPDPGEAPKLCKLDSPSGAALGLSSPSPDSPDAAPEARPRPRRRP 457

Query: 91  RRRVGKPGEHGAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGIS 150
           R   G P    A SL         G +    AR     G ++ +  G+P     A PG  
Sbjct: 458 RPPAGSPARSPAHSL---------GLNFGDAARQTPRHGLSALSAPGLPGPGQPAGPGAW 508

Query: 151 RAGPGSPSMLLPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLPR 209
                SP    P G    + E +    G  G    P G+    APGPG    G SDL R
Sbjct: 509 APPLDSPGTPSPDGPWCFSPEGA---QGAGGVLFAPFGR--AGAPGPG----GGSDLRR 558


>gi|239753749 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 33/91 (36%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 47  RASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLV 106
           R S  S    R   PPPR      PA+  D G ARP       PR R G PG H + S  
Sbjct: 58  RESCGSQGAPRGRRPPPR------PAVPADHGSARPPGCCLASPRIRQGSPGAHQSASAS 111

Query: 107 RRGLLRSCGGHLTPHARVLSSGGTASAARSG 137
            RG      G    H RV   G   + A SG
Sbjct: 112 ERGGSWDWQG----HPRVAPQGRCKARAESG 138


>gi|239748226 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 33/91 (36%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 47  RASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLV 106
           R S  S    R   PPPR      PA+  D G ARP       PR R G PG H + S  
Sbjct: 58  RESCGSQGAPRGRRPPPR------PAVPADHGSARPPGCCLASPRIRQGSPGAHQSASAS 111

Query: 107 RRGLLRSCGGHLTPHARVLSSGGTASAARSG 137
            RG      G    H RV   G   + A SG
Sbjct: 112 ERGGSWDWQG----HPRVAPQGRCKARAESG 138


>gi|239742127 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 33/91 (36%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 47  RASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLV 106
           R S  S    R   PPPR      PA+  D G ARP       PR R G PG H + S  
Sbjct: 58  RESCGSQGAPRGRRPPPR------PAVPADHGSARPPGCCLASPRIRQGSPGAHQSASAS 111

Query: 107 RRGLLRSCGGHLTPHARVLSSGGTASAARSG 137
            RG      G    H RV   G   + A SG
Sbjct: 112 ERGGSWDWQG----HPRVAPQGRCKARAESG 138


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 17/162 (10%)

Query: 41  FPRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEH 100
           +P  P    S+SS    + +P P L  H    L P +     S  S   P +++     H
Sbjct: 40  YPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGS---PPQQLSAATPH 96

Query: 101 GAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSML 160
           G   ++ R  +    G   P A    S  ++S++ S   A +A A    + A   SP+ L
Sbjct: 97  GINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGL 156

Query: 161 LPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAAL 202
           L               G  R +  +PP    GL   P AAA+
Sbjct: 157 LA--------------GLPRFSSLSPPPPPPGLYFSPSAAAV 184


>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
           sapiens]
          Length = 678

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 42/145 (28%), Positives = 57/145 (39%), Gaps = 28/145 (19%)

Query: 32  KLIQLLAELFPRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPR 91
           ++ +LL    P    R   +  R  R P PPP       P   P    A PSP +   PR
Sbjct: 71  RVSRLLERFDPPAAPRRRGSPERA-RPPPPPP-------PPAPPRPPPAAPSPPAAPGPR 122

Query: 92  RRVGKPGEH----------GAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAG 141
                PG             +F++  RGL R  G      AR+LS+G +A   R+G    
Sbjct: 123 GGGASPGARRSDFLQKTGSNSFTVHPRGLHRGAG------ARLLSNGHSAPEPRAGPANR 176

Query: 142 SADAVPGISRAGP----GSPSMLLP 162
            A + PG  +  P    G PS+  P
Sbjct: 177 LAGSPPGSGQWKPKVESGDPSLHPP 201


>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
           sapiens]
          Length = 650

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 42/145 (28%), Positives = 57/145 (39%), Gaps = 28/145 (19%)

Query: 32  KLIQLLAELFPRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPR 91
           ++ +LL    P    R   +  R  R P PPP       P   P    A PSP +   PR
Sbjct: 71  RVSRLLERFDPPAAPRRRGSPERA-RPPPPPP-------PPAPPRPPPAAPSPPAAPGPR 122

Query: 92  RRVGKPGEH----------GAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAG 141
                PG             +F++  RGL R  G      AR+LS+G +A   R+G    
Sbjct: 123 GGGASPGARRSDFLQKTGSNSFTVHPRGLHRGAG------ARLLSNGHSAPEPRAGPANR 176

Query: 142 SADAVPGISRAGP----GSPSMLLP 162
            A + PG  +  P    G PS+  P
Sbjct: 177 LAGSPPGSGQWKPKVESGDPSLHPP 201


>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
          Length = 539

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 11/115 (9%)

Query: 45  PVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFS 104
           PV A STS  +    A P       G + SPD     P+P     P   V  P + G  S
Sbjct: 334 PVPADSTSLLVSEGTATP-------GSSPSPDGPVGAPAPSEPALPPGHVS-PEDPGMGS 385

Query: 105 LVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSM 159
            V+ G  R       P     S  G AS+ R   P+ S D   G+S A PGS SM
Sbjct: 386 QVQPGPGRVSRSTSDPTLCTSSMAGDASSHR---PSCSQDLEAGLSEAVPGSASM 437


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 21/169 (12%)

Query: 58  APAPPPRLKIHAGPALSPDSGQARPSPKSG----------------RRPRRRVGKPGEHG 101
           +P+P  R K  A     P  G+  PSP+S                 RR RRR  +     
Sbjct: 340 SPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSS 399

Query: 102 AFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISR--AGPGSPSM 159
           A +  RRG  R         +R LS   ++S + SG  A      PG  R   G G  + 
Sbjct: 400 ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAK 459

Query: 160 LLPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLP 208
             P  +   +   S    GRRG    P GK +  +PGP   +   S  P
Sbjct: 460 ERPPRARPASTSPSPGAHGRRG---GPEGKSSSRSPGPHPRSWSSSRSP 505


>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 513

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 41/132 (31%), Positives = 51/132 (38%), Gaps = 34/132 (25%)

Query: 59  PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGE------------------- 99
           P PPP     AG   S   G+AR   + G      +G+PG+                   
Sbjct: 324 PPPPP-----AGCGSSAPIGEARRGER-GDHWLPALGRPGDWLAGLQPAFGVKRSLRKCA 377

Query: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTA----SAARSGV-----PAGSADAVPGIS 150
            G  S   R L   C G LT   RV+S G  A    + AR  V     PAG   A+ G  
Sbjct: 378 RGESSAGARPLFPGCRGPLTHWKRVVSLGDEALHGVTRARPAVHWPVSPAGMGGALAGAP 437

Query: 151 RAGPGSPSMLLP 162
           R G G+PS  +P
Sbjct: 438 REGAGAPSSAVP 449


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 47/165 (28%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 45  PVRASSTSSRLLRAPAPPPRLKIHAGPAL---SPDSGQARPSPKSGRRPRRRVGKPGEHG 101
           P RAS  + R      PP R       A    SP  G AR SP    R           G
Sbjct: 87  PARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSA-G 145

Query: 102 AFSLVRRGLLRSCGG-HLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSML 160
             S+  R L   CGG  L   +R L   G+A+  RS   +    A+PG     PG+P   
Sbjct: 146 TRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPG-T 204

Query: 161 LPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPS 205
            P G  +                  PP     +AP P A A  P+
Sbjct: 205 WPVGFAVAA----------------PPAAAASVAPPPPAVAGAPA 233


>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
           sapiens]
          Length = 513

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 41/132 (31%), Positives = 51/132 (38%), Gaps = 34/132 (25%)

Query: 59  PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGE------------------- 99
           P PPP     AG   S   G+AR   + G      +G+PG+                   
Sbjct: 324 PPPPP-----AGCGSSAPIGEARRGER-GDHWLPALGRPGDWLAGLQPAFGVKRSLRKCA 377

Query: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTA----SAARSGV-----PAGSADAVPGIS 150
            G  S   R L   C G LT   RV+S G  A    + AR  V     PAG   A+ G  
Sbjct: 378 RGESSAGARPLFPGCRGPLTHWKRVVSLGDEALHGVTRARPAVHWPVSPAGMGGALAGAP 437

Query: 151 RAGPGSPSMLLP 162
           R G G+PS  +P
Sbjct: 438 REGAGAPSSAVP 449


>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
           sapiens]
          Length = 513

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 41/132 (31%), Positives = 51/132 (38%), Gaps = 34/132 (25%)

Query: 59  PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGE------------------- 99
           P PPP     AG   S   G+AR   + G      +G+PG+                   
Sbjct: 324 PPPPP-----AGCGSSAPIGEARRGER-GDHWLPALGRPGDWLAGLQPAFGVKRSLRKCA 377

Query: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTA----SAARSGV-----PAGSADAVPGIS 150
            G  S   R L   C G LT   RV+S G  A    + AR  V     PAG   A+ G  
Sbjct: 378 RGESSAGARPLFPGCRGPLTHWKRVVSLGDEALHGVTRARPAVHWPVSPAGMGGALAGAP 437

Query: 151 RAGPGSPSMLLP 162
           R G G+PS  +P
Sbjct: 438 REGAGAPSSAVP 449


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 58  APAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGH 117
           AP PPP     AG A     G  RP P S RRP    G             G   SC   
Sbjct: 86  APEPPP-----AGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAP- 139

Query: 118 LTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPG 155
             P A  +++G   + A    PAG A      +RAGPG
Sbjct: 140 -VPAAAAVAAGPEPAPAGPAKPAGPAALA---ARAGPG 173



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 119 TPHARVLSSGGTASAARSGVPAGSADAVPGISRAG-PGSPSMLLPAGSLLLTAERSFTWG 177
           TP  R  ++G   +   SG PAG+A A P     G PG+     PAG       R    G
Sbjct: 47  TPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG-----RARPGGGG 101

Query: 178 GRRGTEKNPPGKWTGLAPGPGAAALGP 204
            +R    +P        P P AA L P
Sbjct: 102 PQRPGPPSPRRPLVPAGPAPPAAKLRP 128



 Score = 31.2 bits (69), Expect = 0.71
 Identities = 40/156 (25%), Positives = 51/156 (32%), Gaps = 14/156 (8%)

Query: 58  APAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGH 117
           APA P +    AGPA         P P  G  P    GKP   GA   +          H
Sbjct: 153 APAGPAK---PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHH 209

Query: 118 LTPHARVLSSGGTASAARSGVPAGSADAV---PGISRAGPGSPSMLLPAGSLLLTAERSF 174
               A  L + G A+      PA     +   P +  A P +P+   P  +    A  + 
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA- 268

Query: 175 TWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLPRV 210
                      PP     LA  PG  A  P+  P V
Sbjct: 269 -------APPPPPPAPATLARPPGHPAGPPTAAPAV 297


>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
          Length = 694

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 46/170 (27%), Positives = 59/170 (34%), Gaps = 28/170 (16%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHG 101
           P+QPV   +   +    PAP P+    A PA      +  P  K+G  P    G+ G +G
Sbjct: 177 PQQPVSEPAAPEQ----PAPEPKHPARA-PARGDSEDRRGPGQKTGPDPASAPGR-GNYG 230

Query: 102 AFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLL 161
               VRR                  SGG   ++RS      A++V   SR  PGS     
Sbjct: 231 P--PVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQA-SRPAPGSVQSPA 287

Query: 162 PAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLPRVA 211
           P                    +   PG   G  PGPG A   P   P VA
Sbjct: 288 PP-------------------QPGQPGTPGGSRPGPGPAGRFPDQKPEVA 318


>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
          Length = 690

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 46/170 (27%), Positives = 59/170 (34%), Gaps = 28/170 (16%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHG 101
           P+QPV   +   +    PAP P+    A PA      +  P  K+G  P    G+ G +G
Sbjct: 173 PQQPVSEPAAPEQ----PAPEPKHPARA-PARGDSEDRRGPGQKTGPDPASAPGR-GNYG 226

Query: 102 AFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLL 161
               VRR                  SGG   ++RS      A++V   SR  PGS     
Sbjct: 227 P--PVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQA-SRPAPGSVQSPA 283

Query: 162 PAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLPRVA 211
           P                    +   PG   G  PGPG A   P   P VA
Sbjct: 284 PP-------------------QPGQPGTPGGSRPGPGPAGRFPDQKPEVA 314


>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
          Length = 980

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 22/111 (19%)

Query: 120 PHARVLSSGGTASAARSGV-----PAGSADAVP------------GISRAGPGSPSMLLP 162
           P A +L  GG   AA  G+     PAG + A P            G    GPG P +L+ 
Sbjct: 18  PLAVLLPPGGPWPAAELGLVLALRPAGESPAGPALLVAALEGPDAGTEEQGPGPPQLLVS 77

Query: 163 AGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGPSDLPRVASL 213
              L L A  S  W   R   + P   W  L       +LGP   PRV  L
Sbjct: 78  RALLRLLALGSGAWVRARAVRRPPALGWALL-----GTSLGPGLGPRVGPL 123


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 29/134 (21%)

Query: 59  PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRR------------RVGKPGEHG-AFSL 105
           PAPPP      GPA    + + RP P +GRR RR            R+G+ G       L
Sbjct: 137 PAPPPA-PARTGPAGKAAADRGRPGPAAGRRVRRSPSFPPFLLAQTRLGRTGPLALCLLL 195

Query: 106 VRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAV-----------PGISRAGP 154
           +  G +R  GG        L+ G    AAR+G   G   A            PG +R  P
Sbjct: 196 LLHGAMRLGGG----SREKLACGRAGRAARTGRGEGGRRAEEEAAGRRRRRRPGRTRGIP 251

Query: 155 GSPSMLLPAGSLLL 168
            +   L  AG+ +L
Sbjct: 252 RAAGGLSRAGTRVL 265


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
            potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 50/174 (28%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 41   FPRQPVRASSTSSRLLRAPA---PPPRLKIHAG-PALSPD---------SGQARPSPKSG 87
            FP  P RAS +   LL  PA   PPP++    G P L+P          S      P+ G
Sbjct: 1038 FPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDG 1097

Query: 88   RRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVP 147
             +  RR   P   G  S+    L    GG          SGG+ S+   G P     A+P
Sbjct: 1098 AQTLRR-ASPHSSGE-SMAAFPLFPRAGG---------GSGGSGSSGGLGPPGRPYGAIP 1146

Query: 148  G--ISRAGPGSPSMLLPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGA 199
            G  ++     S   L P  SL           G R T    P    G    PGA
Sbjct: 1147 GQHVTLPRKTSSGSLPPPLSLF----------GARATSSGGPPLTAGPQREPGA 1190



 Score = 27.7 bits (60), Expect = 7.8
 Identities = 51/217 (23%), Positives = 68/217 (31%), Gaps = 58/217 (26%)

Query: 42   PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKS------------GRR 89
            P    R+ S+S   L  P     L +  GP  +P++   +P P S            G  
Sbjct: 961  PPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFT 1020

Query: 90   PRRRVGKP------------------GEHGAFSL------------VRRGLLRSCGGHLT 119
            PR  +  P                  G HG+  L             RRG      G LT
Sbjct: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT 1080

Query: 120  PHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGR 179
               +++S         +  PA   D    + RA P S    + A  L   A       G 
Sbjct: 1081 QDLKLIS---------ASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGS 1131

Query: 180  RGTEKNPPGKWTGLAPGPGAAALGPSDLPRVASLSSV 216
             G    PPG+  G  PG          LPR  S  S+
Sbjct: 1132 SG-GLGPPGRPYGAIPGQHVT------LPRKTSSGSL 1161


>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 52/183 (28%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHG 101
           PR+  RA+  S+R  RA A P R   H G             P++ RRPR   G      
Sbjct: 109 PRRQSRATGKSARTRRACASPCRPGRHCG-------------PETARRPRPLAG------ 149

Query: 102 AFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLL 161
                       CGG     ARVLS+      + SG  A  +  VP   RA   S     
Sbjct: 150 ---------TTFCGG-----ARVLSN---PPPSGSGGDARPSPLVPRRCRATSASLPQET 192

Query: 162 PAGSLLLTAERSFTWGGRRGTE------KNPPGKWTGLA---------PGPGAAALGPSD 206
           P    ++ A R  + G  RG        K PP  W   A           PG+   G  D
Sbjct: 193 PFALSVVWAPRRRSQGDARGRRTGVPCAKRPPAGWLAAAVTSWSPASRRNPGSLR-GRKD 251

Query: 207 LPR 209
           +PR
Sbjct: 252 VPR 254


>gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 52/183 (28%)

Query: 42  PRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKPGEHG 101
           PR+  RA+  S+R  RA A P R   H G             P++ RRPR   G      
Sbjct: 109 PRRQSRATGKSARTRRACASPCRPGRHCG-------------PETARRPRPLAG------ 149

Query: 102 AFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLL 161
                       CGG     ARVLS+      + SG  A  +  VP   RA   S     
Sbjct: 150 ---------TTFCGG-----ARVLSN---PPPSGSGGDARPSPLVPRRCRATSASLPQET 192

Query: 162 PAGSLLLTAERSFTWGGRRGTE------KNPPGKWTGLA---------PGPGAAALGPSD 206
           P    ++ A R  + G  RG        K PP  W   A           PG+   G  D
Sbjct: 193 PFALSVVWAPRRRSQGDARGRRTGVPCAKRPPAGWLAAAVTSWSPASRRNPGSLR-GRKD 251

Query: 207 LPR 209
           +PR
Sbjct: 252 VPR 254


>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 47/144 (32%), Positives = 58/144 (40%), Gaps = 14/144 (9%)

Query: 69  AGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTPHA--RVLS 126
           +GP+    + +AR +   GRR RR  G PG   A S       +SCGG     A  R L+
Sbjct: 90  SGPSRQRRTSRARTA-LWGRRSRRAAG-PGLDCAGSAPAPSGAQSCGGPAPASALRRPLT 147

Query: 127 ----SGG----TASAARSGVPAGSADAVPGISRAGPGSPSML-LPAGSLLLTAERSFTWG 177
               SGG    + S  R+G P G   +  G  R  P S   L L  GS         +WG
Sbjct: 148 QWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWG 207

Query: 178 GRRGTEKNPPGKWTGLAPGPGAAA 201
           G  GT   P   W       GA A
Sbjct: 208 G-SGTPPPPRALWNRHGGAAGARA 230



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 39/165 (23%), Positives = 54/165 (32%), Gaps = 37/165 (22%)

Query: 38  AELFPRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKP 97
           +EL+ R      S+ +R L  P+        A P         +P+P+    P R  G  
Sbjct: 363 SELWARAERHGGSSGARTLPTPS-------RARPG--------KPAPRGSAPPARLRGGG 407

Query: 98  GEHGAFSLV----RRGLLRSCGGHL------------------TPHARVLSSGGTASAAR 135
           G  G   LV      G+  S G H                    PH R LSS    S  R
Sbjct: 408 GGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPR 467

Query: 136 SGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180
           S         +     + P +P      G  +L    +  WGG+R
Sbjct: 468 SPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 512


>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 47/144 (32%), Positives = 58/144 (40%), Gaps = 14/144 (9%)

Query: 69  AGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTPHA--RVLS 126
           +GP+    + +AR +   GRR RR  G PG   A S       +SCGG     A  R L+
Sbjct: 90  SGPSRQRRTSRARTA-LWGRRSRRAAG-PGLDCAGSAPAPSGAQSCGGPAPASALRRPLT 147

Query: 127 ----SGG----TASAARSGVPAGSADAVPGISRAGPGSPSML-LPAGSLLLTAERSFTWG 177
               SGG    + S  R+G P G   +  G  R  P S   L L  GS         +WG
Sbjct: 148 QWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWG 207

Query: 178 GRRGTEKNPPGKWTGLAPGPGAAA 201
           G  GT   P   W       GA A
Sbjct: 208 G-SGTPPPPRALWNRHGGAAGARA 230



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 39/165 (23%), Positives = 54/165 (32%), Gaps = 37/165 (22%)

Query: 38  AELFPRQPVRASSTSSRLLRAPAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRRRVGKP 97
           +EL+ R      S+ +R L  P+        A P         +P+P+    P R  G  
Sbjct: 363 SELWARAERHGGSSGARTLPTPS-------RARPG--------KPAPRGSAPPARLRGGG 407

Query: 98  GEHGAFSLV----RRGLLRSCGGHL------------------TPHARVLSSGGTASAAR 135
           G  G   LV      G+  S G H                    PH R LSS    S  R
Sbjct: 408 GGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPR 467

Query: 136 SGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRR 180
           S         +     + P +P      G  +L    +  WGG+R
Sbjct: 468 SPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 512


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 53/173 (30%), Positives = 57/173 (32%), Gaps = 37/173 (21%)

Query: 57   RAPAPPPRLKIHAGPALSP--------DSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRR 108
            R P  P  L   AG A  P        D    R     G+  R   G PG  GA      
Sbjct: 992  RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGA------ 1045

Query: 109  GLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAV-PGISRAGPGSPSMLLPAGSLL 167
                   GH  P   V  +G +     SG PAG A A  P  SR  PG      P G   
Sbjct: 1046 ------PGHPGPPGPVGPAGKSGDRGESG-PAGPAGAPGPAGSRGAPGPQG---PRGDKG 1095

Query: 168  LTAERSFTW-GGRRGTEKNP-------PGKWTGLAPGPGAAA----LGPSDLP 208
             T ER      G RG   NP       P    G    PG A     +GPS  P
Sbjct: 1096 ETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPP 1148



 Score = 32.0 bits (71), Expect = 0.41
 Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 23/158 (14%)

Query: 48   ASSTSSRLLRAPAPPPRLKIHAGP-ALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLV 106
            A  T +R L  P   P  +   GP  +  +SG+   +  SG R     G PG  G     
Sbjct: 950  AGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGER-----GPPGPQG----- 999

Query: 107  RRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSMLLPAGSL 166
                L    G      R  + G      R G P G  D     S   PG+P    P G +
Sbjct: 1000 ----LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPV 1055

Query: 167  LLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAALGP 204
                +      G RG E  P G     APGP  +   P
Sbjct: 1056 GPAGK-----SGDRG-ESGPAG--PAGAPGPAGSRGAP 1085



 Score = 31.2 bits (69), Expect = 0.71
 Identities = 43/141 (30%), Positives = 50/141 (35%), Gaps = 32/141 (22%)

Query: 77  SGQARPSPKSGRRPRRRVGKPGEHGAFSLV-RRGLLRSCGGHLTPHARVLSSGGTASAAR 135
           SG A P    G +  R  G PG  GA      RGL    G          S+G       
Sbjct: 848 SGPAGPPGPQGVKGER--GSPGGPGAAGFPGARGLPGPPG----------SNGNPGPPGP 895

Query: 136 SGVPAGSADAVPGISRAGPGSPSMLLPAGSLLLTAERSFTWGGRRGTEKNPPGKWTGLAP 195
           SG P       P  +   PGSP +  P G      E+     G  G +  PPG     AP
Sbjct: 896 SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEK-----GSPGAQ-GPPG-----AP 944

Query: 196 GP-------GAAAL-GPSDLP 208
           GP       GA  L GP  +P
Sbjct: 945 GPLGIAGITGARGLAGPPGMP 965



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 43/155 (27%), Positives = 53/155 (34%), Gaps = 40/155 (25%)

Query: 69   AGPALSPDSGQARPSPKSGRRPRRRVGKPGEHGAFSLVRRGLLRSCGGHLTPHARVLSSG 128
            AGPA +P    +R +P   + PR   G+ GE GA  +          GH           
Sbjct: 1070 AGPAGAPGPAGSRGAP-GPQGPRGDKGETGERGAAGIK---------GHR-------GFP 1112

Query: 129  GTASAARSGVPAGSADAVPGISRAGP----------------GSPSMLLPAGSLLLTAER 172
            G   A  S  PAG   A+     AGP                G P  + P G      ER
Sbjct: 1113 GNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGER 1172

Query: 173  SFTWGGRRGTEKNPPGKWTGLAPGP-----GAAAL 202
                      +  PPG     APGP     GAAA+
Sbjct: 1173 GSEGSPGHPGQPGPPG--PPGAPGPCCGGVGAAAI 1205


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,781,185
Number of Sequences: 37866
Number of extensions: 636440
Number of successful extensions: 4546
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 4179
Number of HSP's gapped (non-prelim): 775
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.