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Search of human proteins with 239753600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753600 PREDICTED: hypothetical protein [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753600 PREDICTED: hypothetical protein [Homo sapiens] 502 e-142
gi|169164963 PREDICTED: hypothetical protein [Homo sapiens] 476 e-134
gi|93204881 Rab interacting lysosomal protein [Homo sapiens] 35 0.065
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 33 0.19
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 33 0.19
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 33 0.19
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] 33 0.25
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 32 0.72
gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isofor... 31 0.93
gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isofor... 31 0.93
gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isoofor... 31 0.93
gi|225690502 junctophilin 4 [Homo sapiens] 31 1.2
gi|225690500 junctophilin 4 [Homo sapiens] 31 1.2
gi|157743252 pecanex-like 3 [Homo sapiens] 31 1.2
gi|239748498 PREDICTED: hypothetical protein XP_002346677 [Homo ... 30 1.6
gi|239742460 PREDICTED: hypothetical protein XP_002342521 [Homo ... 30 1.6
gi|119703755 laminin, beta 2 precursor [Homo sapiens] 30 1.6
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 30 1.6
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1
gi|239755656 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ... 30 2.1
gi|239750182 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ... 30 2.1
gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo ... 30 2.1
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 30 2.1
gi|169169847 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens] 29 3.6
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens] 29 3.6
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens] 29 3.6
gi|21735548 centrosomal protein 2 [Homo sapiens] 29 4.6
>gi|239753600 PREDICTED: hypothetical protein [Homo sapiens]
Length = 258
Score = 502 bits (1293), Expect = e-142
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL 60
MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL
Sbjct: 1 MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL 60
Query: 61 VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR 120
VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR
Sbjct: 61 VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR 120
Query: 121 ALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA 180
ALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA
Sbjct: 121 ALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA 180
Query: 181 RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV 240
RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV
Sbjct: 181 RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV 240
Query: 241 LQDLVAQRALQVRPRTPA 258
LQDLVAQRALQVRPRTPA
Sbjct: 241 LQDLVAQRALQVRPRTPA 258
>gi|169164963 PREDICTED: hypothetical protein [Homo sapiens]
Length = 250
Score = 476 bits (1224), Expect = e-134
Identities = 250/258 (96%), Positives = 250/258 (96%), Gaps = 8/258 (3%)
Query: 1 MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL 60
MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL
Sbjct: 1 MFPGSSGHPCTQRDGAGPWVPRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLL 60
Query: 61 VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR 120
VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR
Sbjct: 61 VAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAAR 120
Query: 121 ALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA 180
ALLAV RVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA
Sbjct: 121 ALLAV--------RVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAAAA 172
Query: 181 RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV 240
RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV
Sbjct: 173 RRVRALDVQLEDKALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRGQRV 232
Query: 241 LQDLVAQRALQVRPRTPA 258
LQDLVAQRALQVRPRTPA
Sbjct: 233 LQDLVAQRALQVRPRTPA 250
>gi|93204881 Rab interacting lysosomal protein [Homo sapiens]
Length = 401
Score = 35.0 bits (79), Expect = 0.065
Identities = 65/222 (29%), Positives = 88/222 (39%), Gaps = 17/222 (7%)
Query: 21 PRDPGWRSGRAAGAYLAAGRRGH-AAAERVEARAVFGEFLLVAQRGHLQLKLRRGQLGHQ 79
P PGW S AAG+ AA H A A E + + F A G + L +R +L Q
Sbjct: 8 PGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVRALELLEQ 67
Query: 80 RLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPRVARVAHVR 139
+ P+ L + Q A+ L R +R R R L A P + R
Sbjct: 68 AAVG-PAPDSLQVS--AQPAEQELRRLREENERLR-----RELRAGPQEERALLRQLKEV 119
Query: 140 LHVAPQQHLAATRVATARGREVAAL-EVLRQLLQLDHPAAAARRVRALDVQL---EDKAL 195
+ A R RG+E AL E L++LL ++ A ++ A+ QL +D+
Sbjct: 120 TDRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVN--AELRHKLAAMQTQLRAAQDRER 177
Query: 196 ERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARRG 237
ERQ E QA AR A H QH E A G
Sbjct: 178 ERQQPGEAATPQAKERARGQAGRPGH--QHGQEPEWATAGAG 217
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 33.5 bits (75), Expect = 0.19
Identities = 68/262 (25%), Positives = 96/262 (36%), Gaps = 57/262 (21%)
Query: 27 RSGRAAGAY---LAAGRRGHAAAERV---------EARAVFGEFLLVAQRGH-------L 67
R G+A G L RRG A E+ E RA Q G L
Sbjct: 1225 RHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRLEL 1284
Query: 68 QLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERA--VVRPQRSRAAVAARALLAV 125
QL+ +G+ G +A++L QRAQA LE + S+ ++ L +
Sbjct: 1285 QLQEVQGRAGDGERARAEAAEKL------QRAQAELENVSGALNEAESKTIRLSKELSST 1338
Query: 126 PAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEV----LRQLLQLDHPA--AA 179
A +LH A + TR A G V A+E LR+ L+ + A A
Sbjct: 1339 EA-----------QLHDAQELLQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERA 1387
Query: 180 ARRVRALDVQLED---KALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARR 236
R ++ QL + + E +E AAR A AL + + + R
Sbjct: 1388 GRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTETVDRL--ER 1445
Query: 237 GQRVLQ--------DLVAQRAL 250
G+R LQ DL QR L
Sbjct: 1446 GRRRLQQELDDATMDLEQQRQL 1467
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 33.5 bits (75), Expect = 0.19
Identities = 68/262 (25%), Positives = 96/262 (36%), Gaps = 57/262 (21%)
Query: 27 RSGRAAGAY---LAAGRRGHAAAERV---------EARAVFGEFLLVAQRGH-------L 67
R G+A G L RRG A E+ E RA Q G L
Sbjct: 1217 RHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRLEL 1276
Query: 68 QLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERA--VVRPQRSRAAVAARALLAV 125
QL+ +G+ G +A++L QRAQA LE + S+ ++ L +
Sbjct: 1277 QLQEVQGRAGDGERARAEAAEKL------QRAQAELENVSGALNEAESKTIRLSKELSST 1330
Query: 126 PAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEV----LRQLLQLDHPA--AA 179
A +LH A + TR A G V A+E LR+ L+ + A A
Sbjct: 1331 EA-----------QLHDAQELLQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERA 1379
Query: 180 ARRVRALDVQLED---KALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARR 236
R ++ QL + + E +E AAR A AL + + + R
Sbjct: 1380 GRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTETVDRL--ER 1437
Query: 237 GQRVLQ--------DLVAQRAL 250
G+R LQ DL QR L
Sbjct: 1438 GRRRLQQELDDATMDLEQQRQL 1459
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 33.5 bits (75), Expect = 0.19
Identities = 68/262 (25%), Positives = 96/262 (36%), Gaps = 57/262 (21%)
Query: 27 RSGRAAGAY---LAAGRRGHAAAERV---------EARAVFGEFLLVAQRGH-------L 67
R G+A G L RRG A E+ E RA Q G L
Sbjct: 1258 RHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRLEL 1317
Query: 68 QLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERA--VVRPQRSRAAVAARALLAV 125
QL+ +G+ G +A++L QRAQA LE + S+ ++ L +
Sbjct: 1318 QLQEVQGRAGDGERARAEAAEKL------QRAQAELENVSGALNEAESKTIRLSKELSST 1371
Query: 126 PAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEV----LRQLLQLDHPA--AA 179
A +LH A + TR A G V A+E LR+ L+ + A A
Sbjct: 1372 EA-----------QLHDAQELLQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERA 1420
Query: 180 ARRVRALDVQLED---KALERQDVVELFGRQATAAARRAAALLHHPGQHAAGAEDVAARR 236
R ++ QL + + E +E AAR A AL + + + R
Sbjct: 1421 GRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTETVDRL--ER 1478
Query: 237 GQRVLQ--------DLVAQRAL 250
G+R LQ DL QR L
Sbjct: 1479 GRRRLQQELDDATMDLEQQRQL 1500
>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
Length = 3639
Score = 33.1 bits (74), Expect = 0.25
Identities = 59/220 (26%), Positives = 88/220 (40%), Gaps = 25/220 (11%)
Query: 43 HAAAERVEARAVFGEFLLVAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQ-- 100
H A + E + G + V LQ K R Q L+AL A+R LLE+ +QRA+
Sbjct: 556 HLAQQTAELDSSLGTSVEV-----LQAKARTLAQLQQSLVALVRARRALLEQTLQRAEFL 610
Query: 101 --AGLERAVVRP--QRSRAAVAARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATA 156
E A ++ QR A R L + A H L +H A
Sbjct: 611 RNCEEEEAWLKECGQRVGNAALGRDLSQIAG-----ALQKHKALEAEVHRHQAVCVDLVR 665
Query: 157 RGREVAALEVLRQLLQLDHPAAAARRVRALDVQLEDKALERQD---VVELFGRQATAAA- 212
RGR+++A Q + A + L ++ + Q V++ F A AA+
Sbjct: 666 RGRDLSARRPPTQPDPGERAEAVQGGWQLLQTRVVGRGARLQTALLVLQYFADAAEAASW 725
Query: 213 ---RRAAALLHHPGQHAAGAEDVAAR--RGQRVLQDLVAQ 247
RR++ GQ A AE + R R +RVL+ A+
Sbjct: 726 LRERRSSLERASCGQDQAAAETLLRRHVRLERVLRAFAAE 765
Score = 28.9 bits (63), Expect = 4.6
Identities = 58/215 (26%), Positives = 81/215 (37%), Gaps = 27/215 (12%)
Query: 40 RRGHAAAERVEARAVFGEFLLVAQRGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRA 99
R GH A+ VE +A +R + K R L +R A+ LLL+
Sbjct: 2820 REGHCLAQDVEEQA---------RRLLQRFKSLREPLQERRTAL--EARSLLLKFF---R 2865
Query: 100 QAGLERAVVRPQRSRAAVA--ARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATAR 157
A E A V+ + AA ++L AV R + H L H A TRV
Sbjct: 2866 DADEEMAWVQEKLPLAAAQDYGQSLSAV-----RHLQEQHQNLESEMSSHEALTRVVLGT 2920
Query: 158 GREV------AALEVLRQLLQLDHPAAAARRVRALDVQLEDKALERQDVVELFGRQATAA 211
G ++ AA EV ++ QL+ A R A L +A E Q + +
Sbjct: 2921 GYKLVQAGHFAAHEVAARVQQLEKAMAHLRAEAARRRLLLQQAQEAQQFLTELLEAGSWL 2980
Query: 212 ARRAAALLHHPGQHAAGAEDVAARRGQRVLQDLVA 246
A R L H+A A RR + +DL A
Sbjct: 2981 AERGHVLDSEDMGHSAEATQALLRRLEATKRDLEA 3015
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 31.6 bits (70), Expect = 0.72
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 187 DVQLEDKALERQDVVELFGRQATAA------ARRAAALLHHPGQHAAGAEDV 232
+ QLE K +R+D ++ G A+ A R AL+HHP +H+ + +V
Sbjct: 313 NAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV 364
>gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isoform 2
[Homo sapiens]
Length = 985
Score = 31.2 bits (69), Expect = 0.93
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 39 GRRGHAAAERVEARAVFGEFLLVAQRGH--LQLKLRR-GQLGHQRLLALPSAQRLLLERL 95
G G A A V E L+ QR H LQ +LRR +LG +R S + L E
Sbjct: 784 GEAGRAGAAPVAPEKQATELALL-QRQHALLQEELRRCRRLGEERATEAGSLEARLRES- 841
Query: 96 VQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPR 131
++A+A LER +R AA+ L A W R
Sbjct: 842 -EQARALLEREAEEARRQLAALGQTEPLPAEAPWAR 876
>gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isoform 1
[Homo sapiens]
Length = 986
Score = 31.2 bits (69), Expect = 0.93
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 39 GRRGHAAAERVEARAVFGEFLLVAQRGH--LQLKLRR-GQLGHQRLLALPSAQRLLLERL 95
G G A A V E L+ QR H LQ +LRR +LG +R S + L E
Sbjct: 785 GEAGRAGAAPVAPEKQATELALL-QRQHALLQEELRRCRRLGEERATEAGSLEARLRES- 842
Query: 96 VQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPR 131
++A+A LER +R AA+ L A W R
Sbjct: 843 -EQARALLEREAEEARRQLAALGQTEPLPAEAPWAR 877
>gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isooform 3
[Homo sapiens]
Length = 958
Score = 31.2 bits (69), Expect = 0.93
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 39 GRRGHAAAERVEARAVFGEFLLVAQRGH--LQLKLRR-GQLGHQRLLALPSAQRLLLERL 95
G G A A V E L+ QR H LQ +LRR +LG +R S + L E
Sbjct: 757 GEAGRAGAAPVAPEKQATELALL-QRQHALLQEELRRCRRLGEERATEAGSLEARLRES- 814
Query: 96 VQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPR 131
++A+A LER +R AA+ L A W R
Sbjct: 815 -EQARALLEREAEEARRQLAALGQTEPLPAEAPWAR 849
>gi|225690502 junctophilin 4 [Homo sapiens]
Length = 628
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 4 GSSGHPCTQRDGAGPWVPRDPGWRSGRA----AGAYLAAGRRGHAAAERVEARAVFGEFL 59
GS+G P ++ +GP P G A AG + A R G ++R GE+L
Sbjct: 253 GSTGPPGSE--ASGPPAAAPPALIEGSATEVYAGEWRADRRSGFGVSQRSNGLRYEGEWL 310
Query: 60 LVAQRGHLQL----------KLRRGQL---GHQRLLALPSAQRLLLERLVQRAQAGLERA 106
+ G+ + K +R +L G R L + +R ++ V RA G RA
Sbjct: 311 GNRRHGYGRTTRPDGSREEGKYKRNRLVHGGRVRSLLPLALRRGKVKEKVDRAVEGARRA 370
Query: 107 VVRPQRSRAAVAARA 121
V ++ + AARA
Sbjct: 371 VSAARQRQEIAAARA 385
>gi|225690500 junctophilin 4 [Homo sapiens]
Length = 628
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 4 GSSGHPCTQRDGAGPWVPRDPGWRSGRA----AGAYLAAGRRGHAAAERVEARAVFGEFL 59
GS+G P ++ +GP P G A AG + A R G ++R GE+L
Sbjct: 253 GSTGPPGSE--ASGPPAAAPPALIEGSATEVYAGEWRADRRSGFGVSQRSNGLRYEGEWL 310
Query: 60 LVAQRGHLQL----------KLRRGQL---GHQRLLALPSAQRLLLERLVQRAQAGLERA 106
+ G+ + K +R +L G R L + +R ++ V RA G RA
Sbjct: 311 GNRRHGYGRTTRPDGSREEGKYKRNRLVHGGRVRSLLPLALRRGKVKEKVDRAVEGARRA 370
Query: 107 VVRPQRSRAAVAARA 121
V ++ + AARA
Sbjct: 371 VSAARQRQEIAAARA 385
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 30.8 bits (68), Expect = 1.2
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 15/109 (13%)
Query: 24 PGWRS-----GRAAGAYLAAGRRGHAAAER----VEARAVFGE------FLLVAQRGHLQ 68
PGWR G GA GRR +++ R + R G ++ + LQ
Sbjct: 554 PGWRGELQEEGAVGGAAEETGRRDRSSSVRRTQAIRRRHNAGSNPTPPASVMGSPPSSLQ 613
Query: 69 LKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAV 117
R H R L LPSA L+ RA A + A S AV
Sbjct: 614 EAQRGRAASHSRALTLPSALHFASSLLLTRAGANVHEACTFDDTSEGAV 662
>gi|239748498 PREDICTED: hypothetical protein XP_002346677 [Homo
sapiens]
Length = 197
Score = 30.4 bits (67), Expect = 1.6
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 10 CTQRDGAGPWV--PRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVF-GEFLLVAQ--- 63
C + GAGP V P PG GR Y + R H ER +++ GE VA+
Sbjct: 79 CPKVPGAGPEVASPHGPGAGPGRT--NYNSRHARRHDVTERTTPQSLADGEAGRVAEDLC 136
Query: 64 -RGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAV 117
R RG H + R L + +R A RA+ P+RSR+AV
Sbjct: 137 LRAWNGFSRTRGNTSHNK--------RQLWWNVQRRCAAQACRALGNPRRSRSAV 183
>gi|239742460 PREDICTED: hypothetical protein XP_002342521 [Homo
sapiens]
Length = 195
Score = 30.4 bits (67), Expect = 1.6
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 10 CTQRDGAGPWV--PRDPGWRSGRAAGAYLAAGRRGHAAAERVEARAVF-GEFLLVAQ--- 63
C + GAGP V P PG GR Y + R H ER +++ GE VA+
Sbjct: 77 CPKVPGAGPEVVSPHGPGAGPGRT--NYNSRHARRHDVTERTTPQSLADGEAGRVAEDLC 134
Query: 64 -RGHLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAV 117
R RG H + R L + +R A RA+ P+RSR+AV
Sbjct: 135 LRAWNGFSRTRGNTSHNK--------RQLWWNVQRRCAAQACRALGNPRRSRSAV 181
>gi|119703755 laminin, beta 2 precursor [Homo sapiens]
Length = 1798
Score = 30.4 bits (67), Expect = 1.6
Identities = 72/276 (26%), Positives = 99/276 (35%), Gaps = 56/276 (20%)
Query: 7 GHPCTQRDGAGPWVPRDPGWR-SGRAAGAYLAAGRRGHAAAERVEARAVFGEFLLVAQRG 65
G C DG PR G +G AA A LA GR H AE A A G
Sbjct: 1425 GAGCRDEDGQ----PRCGGLSCNGAAATADLALGRARHTQAELQRALAEGGS-------- 1472
Query: 66 HLQLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERA-VVRPQRSRAAVAARALL- 123
+L+ + R QRAQA L++A R Q +A + L+
Sbjct: 1473 ---------------ILSRVAETRRQASEAQQRAQAALDKANASRGQVEQANQELQELIQ 1517
Query: 124 ----------AVPAHWPRVA-RVAHVRLHVAPQ--QHLAATRVATAR---------GREV 161
A P VA RV + + + + QHLA R R V
Sbjct: 1518 SVKDFLNQEGADPDSIEMVATRVLELSIPASAEQIQHLAGAIAERVRSLADVDAILARTV 1577
Query: 162 AALEVLRQLLQLDHPA---AAARRVRALDVQLE-DKALERQDVVELFGRQATAAARRAAA 217
+ QLLQ A A + +A VQ ++A Q + + R A A R
Sbjct: 1578 GDVRRAEQLLQDARRARSWAEDEKQKAETVQAALEEAQRAQGIAQGAIRGAVADTRDTEQ 1637
Query: 218 LLHHPGQHAAGAEDVAARRGQRVLQDLVAQRALQVR 253
L+ + AGAE + G+R Q AL+++
Sbjct: 1638 TLYQVQERMAGAERALSSAGERARQLDALLEALKLK 1673
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 30.4 bits (67), Expect = 1.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 187 DVQLEDKALERQDVVELFGRQATAA------ARRAAALLHHPGQHAAGAEDV 232
+ QLE + +R+D ++ G A+ A R AL+HHP +H+ + +V
Sbjct: 369 NAQLELRKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV 420
>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 30.0 bits (66), Expect = 2.1
Identities = 45/161 (27%), Positives = 60/161 (37%), Gaps = 16/161 (9%)
Query: 67 LQLKLRRGQLGHQRLLALPS------AQRLLLERLVQR--AQAGLERAVVRPQRSRAAVA 118
L++ L G RLL P A L +R+VQ QA LE P+R
Sbjct: 40 LRVPLEEGVGRRHRLLQPPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQLPRRVGHLEG 99
Query: 119 ARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAA 178
+ LA P + A P AA + RGR AA+ V L P
Sbjct: 100 GQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAEGLAVAQEPVQ 159
Query: 179 AARRV---RALD-----VQLEDKALERQDVVELFGRQATAA 211
RR+ RAL V L+ + R ++ GR+A A
Sbjct: 160 PQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEA 200
>gi|239755656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 30.0 bits (66), Expect = 2.1
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 73 RGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPRV 132
R L H+R +A P + LL R + GL RP + AAVA+ L + PA P
Sbjct: 384 RSILSHRRWVATPGSS-LLRPEAPARPREGL-----RPASANAAVASPMLGSSPASGPPS 437
Query: 133 ARV--AHVRLHVAPQQHLAATRVATARGR 159
AR+ AH R + ++ ++ ++ +R R
Sbjct: 438 ARLYSAH-RFRMVSRRWRSSLSISCSRSR 465
>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 2.1
Identities = 45/161 (27%), Positives = 60/161 (37%), Gaps = 16/161 (9%)
Query: 67 LQLKLRRGQLGHQRLLALPS------AQRLLLERLVQR--AQAGLERAVVRPQRSRAAVA 118
L++ L G RLL P A L +R+VQ QA LE P+R
Sbjct: 105 LRVPLEEGVGRRHRLLQPPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQLPRRVGHLEG 164
Query: 119 ARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAA 178
+ LA P + A P AA + RGR AA+ V L P
Sbjct: 165 GQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAEGLAVAQEPVQ 224
Query: 179 AARRV---RALD-----VQLEDKALERQDVVELFGRQATAA 211
RR+ RAL V L+ + R ++ GR+A A
Sbjct: 225 PQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEA 265
>gi|239750182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 522
Score = 30.0 bits (66), Expect = 2.1
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 73 RGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPRV 132
R L H+R +A P + LL R + GL RP + AAVA+ L + PA P
Sbjct: 384 RSILSHRRWVATPGSS-LLRPEAPARPREGL-----RPASANAAVASPMLGSSPASGPPS 437
Query: 133 ARV--AHVRLHVAPQQHLAATRVATARGR 159
AR+ AH R + ++ ++ ++ +R R
Sbjct: 438 ARLYSAH-RFRMVSRRWRSSLSISCSRSR 465
>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 2.1
Identities = 45/161 (27%), Positives = 60/161 (37%), Gaps = 16/161 (9%)
Query: 67 LQLKLRRGQLGHQRLLALPS------AQRLLLERLVQR--AQAGLERAVVRPQRSRAAVA 118
L++ L G RLL P A L +R+VQ QA LE P+R
Sbjct: 105 LRVPLEEGVGRRHRLLQPPETGPRVGAGSHLEQRVVQVLVGQAALEVTQQLPRRVGHLEG 164
Query: 119 ARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQLDHPAA 178
+ LA P + A P AA + RGR AA+ V L P
Sbjct: 165 GQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRGAAAVGVAEGLAVAQEPVQ 224
Query: 179 AARRV---RALD-----VQLEDKALERQDVVELFGRQATAA 211
RR+ RAL V L+ + R ++ GR+A A
Sbjct: 225 PQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEA 265
>gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo
sapiens]
Length = 471
Score = 30.0 bits (66), Expect = 2.1
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 73 RGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPRV 132
R L H+R +A P + LL R + GL RP + AAVA+ L + PA P
Sbjct: 333 RSILSHRRWVATPGSS-LLRPEAPARPREGL-----RPASANAAVASPMLGSSPASGPPS 386
Query: 133 ARV--AHVRLHVAPQQHLAATRVATARGR 159
AR+ AH R + ++ ++ ++ +R R
Sbjct: 387 ARLYSAH-RFRMVSRRWRSSLSISCSRSR 414
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 30.0 bits (66), Expect = 2.1
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 34/191 (17%)
Query: 27 RSGRAAGAYLAAGRRGHAAAERVEARAVFGEFLLVAQRGHLQLKLRRGQLGH-------- 78
R G A G A G + R E L AQ G +LR +LGH
Sbjct: 14 RRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLRELGHEKDSLQRQ 73
Query: 79 ------QRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPAHWPRV 132
Q AL L E+L++R + E A ++ +R+ + L + + R
Sbjct: 74 LSIALPQEFAALTKELNLCREQLLEREE---EIAELKAERNNTRLLLEHLECLVSRHERS 130
Query: 133 ARVAHVRLHVAPQQHLAATRVATARGREVAALEVLRQLLQL-DHPAAAARRVRALDVQLE 191
R+ V+ R A + G + +EVL+ L L +H A +VR +
Sbjct: 131 LRMTVVK------------RQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVR----ERL 174
Query: 192 DKALERQDVVE 202
ALER V+E
Sbjct: 175 RMALERVAVLE 185
>gi|169169847 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 29.6 bits (65), Expect = 2.7
Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Query: 15 GAGPWVPRDPGWRSGRAAGAYL---AAGRRGHAAAERVEARAVFGEFLLVAQR----GHL 67
G G R G + RA+G + AAG AA ER RAV V R GHL
Sbjct: 51 GVGDAEVRHWGTLTSRASGMRVGIWAAGGGLAAAGERNSVRAVSFSSGRVGVREEAAGHL 110
Query: 68 QLKLRRGQLGHQRLLALPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVAARALLAVPA 127
+ G G LA+ + E LV+ AG+ Q A AA A + A
Sbjct: 111 AVGAA-GLTGAHADLAVGRGAEVTEEALVR--VAGVALGAQLAQLLGADAAAAAAVQHEA 167
Query: 128 HWPRVARVAHVRLHVAPQQHLAATRVATARG 158
H R AR VR P LA R+ +G
Sbjct: 168 HARRTARRWLVRAPARPAAVLADGRLQGGQG 198
>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 3.6
Identities = 49/157 (31%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 73 RGQLGHQRLLALPSAQRLLLE---------RLVQRAQAGLERAVVRPQRSRAAVA----- 118
RG++ + LLAL +A+ LL R+ A L V R RA V
Sbjct: 204 RGEVA-EALLALATAEGLLAGVHAQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRA 262
Query: 119 -ARALLAVPAHWPRVARVAHVRLHV--APQQHLAATRVATARGREVAALEVLRQLLQLDH 175
A L A+ AH +ARV + LH AP + LAA A V AL V + + +
Sbjct: 263 DAEGLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEG 322
Query: 176 PAAAARRVRALDVQLEDKALERQDVVELFGRQATAAA 212
AA RV L A + V+E G A A A
Sbjct: 323 LAALGARVGLL-------ARVQAPVLEQVGAPAEALA 352
>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 3.6
Identities = 49/157 (31%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 73 RGQLGHQRLLALPSAQRLLLE---------RLVQRAQAGLERAVVRPQRSRAAVA----- 118
RG++ + LLAL +A+ LL R+ A L V R RA V
Sbjct: 204 RGEVA-EALLALATAEGLLAGVHAQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRA 262
Query: 119 -ARALLAVPAHWPRVARVAHVRLHV--APQQHLAATRVATARGREVAALEVLRQLLQLDH 175
A L A+ AH +ARV + LH AP + LAA A V AL V + + +
Sbjct: 263 DAEGLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEG 322
Query: 176 PAAAARRVRALDVQLEDKALERQDVVELFGRQATAAA 212
AA RV L A + V+E G A A A
Sbjct: 323 LAALGARVGLL-------ARVQAPVLEQVGAPAEALA 352
>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 3.6
Identities = 49/157 (31%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 73 RGQLGHQRLLALPSAQRLLLE---------RLVQRAQAGLERAVVRPQRSRAAVA----- 118
RG++ + LLAL +A+ LL R+ A L V R RA V
Sbjct: 204 RGEVA-EALLALATAEGLLAGVHAQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRA 262
Query: 119 -ARALLAVPAHWPRVARVAHVRLHV--APQQHLAATRVATARGREVAALEVLRQLLQLDH 175
A L A+ AH +ARV + LH AP + LAA A V AL V + + +
Sbjct: 263 DAEGLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEG 322
Query: 176 PAAAARRVRALDVQLEDKALERQDVVELFGRQATAAA 212
AA RV L A + V+E G A A A
Sbjct: 323 LAALGARVGLL-------ARVQAPVLEQVGAPAEALA 352
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 28.9 bits (63), Expect = 4.6
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 24/221 (10%)
Query: 60 LVAQRGHLQLKLRRGQLGHQRLLA-LPSAQRLLLERLVQRAQAGLERAVVRPQRSRAAVA 118
+V + LQ +G+L Q L + L AQR L +R + E+ + Q R
Sbjct: 1780 IVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEK 1839
Query: 119 ARALLAVPAHWPRVARVAHVRLHVAPQQHLAATRVATARGREVAALEVL----------- 167
A AL + H L +Q GR V ALE +
Sbjct: 1840 ADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQ 1899
Query: 168 -RQLLQLDHPAAAARRVRALDVQ-LEDKALERQDVVELFGRQATAAARRAAALLHHPGQH 225
+ LL L A + ++ + L+D L+ Q V++ ++ A + + H
Sbjct: 1900 EKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAA 1959
Query: 226 AAGAEDV--------AARRG--QRVLQDLVAQRALQVRPRT 256
A AE + AA +G Q +L+ R+L+ T
Sbjct: 1960 RARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTAT 2000
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,915,681
Number of Sequences: 37866
Number of extensions: 356467
Number of successful extensions: 1793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1771
Number of HSP's gapped (non-prelim): 62
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.