Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239753114
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
(322 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 653 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 59 6e-09
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 50 2e-06
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 50 2e-06
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ... 49 6e-06
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 47 2e-05
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 47 2e-05
gi|188536004 zinc finger protein 469 [Homo sapiens] 47 3e-05
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 47 3e-05
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 47 3e-05
gi|33356148 formin-like 1 [Homo sapiens] 47 3e-05
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 46 4e-05
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 46 4e-05
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 46 5e-05
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 45 7e-05
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 45 9e-05
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 45 9e-05
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 45 9e-05
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 45 9e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 45 1e-04
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239582763 ral guanine nucleotide dissociation stimulator-like... 45 1e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 45 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 45 1e-04
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 653 bits (1685), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MASEAFPRSRALQKLNKQTKKRKIAREHLTWCGQRCQQKIAKAGHRVAARAGRRYRDKAL 60
MASEAFPRSRALQKLNKQTKKRKIAREHLTWCGQRCQQKIAKAGHRVAARAGRRYRDKAL
Sbjct: 1 MASEAFPRSRALQKLNKQTKKRKIAREHLTWCGQRCQQKIAKAGHRVAARAGRRYRDKAL 60
Query: 61 GSARRAEVSTGSCCRRSLAPQVFLRMQPDVQERTRTDRRSPISPARACGGPAGAARGAAS 120
GSARRAEVSTGSCCRRSLAPQVFLRMQPDVQERTRTDRRSPISPARACGGPAGAARGAAS
Sbjct: 61 GSARRAEVSTGSCCRRSLAPQVFLRMQPDVQERTRTDRRSPISPARACGGPAGAARGAAS 120
Query: 121 LALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHISTEPP 180
LALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHISTEPP
Sbjct: 121 LALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHISTEPP 180
Query: 181 PPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGL 240
PPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGL
Sbjct: 181 PPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGL 240
Query: 241 AAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAA 300
AAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAA
Sbjct: 241 AAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAA 300
Query: 301 PAPALRSSFMFLALFPRKPGTL 322
PAPALRSSFMFLALFPRKPGTL
Sbjct: 301 PAPALRSSFMFLALFPRKPGTL 322
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 58.9 bits (141), Expect = 6e-09
Identities = 78/279 (27%), Positives = 101/279 (36%), Gaps = 49/279 (17%)
Query: 67 EVSTGSCCRRSLAPQVFLRMQPDVQERTRTDRRSPISPARACGGPAGAAR-------GAA 119
E S GSC A V +P +P PA+ G A AAR G
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEP-----------APAGPAKPAGPAALAARAGPGPGPGPG 179
Query: 120 SLALPTRGVPLPLSRWRT--GSLTYVAGDLGASGAVSARVRARASL-------ALGLPIQ 170
P G P +T GS + A+ AVS A+L A G IQ
Sbjct: 180 PGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239
Query: 171 CHRHISTEPPPPP-----PAAPATGS-AQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLP 224
+ PP P PAAPA + A + P P PA A L P H + PP P
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAA----P 295
Query: 225 A-PLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGR 283
A P P + GG++ AP+P GG GPG A P ++A
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES--------- 346
Query: 284 GYQQRLPSRSPHAAPAAPAPALRSSFMFLALFPRKPGTL 322
+R+ +P AA A S+ + + P G L
Sbjct: 347 --PKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL 383
Score = 38.9 bits (89), Expect = 0.006
Identities = 56/190 (29%), Positives = 67/190 (35%), Gaps = 18/190 (9%)
Query: 144 AGDLGASGAVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARA 203
AG LG + VS A P + + EPPP A P G Q RP P R
Sbjct: 55 AGALG-NHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQ-RPGPPSPRR 112
Query: 204 PLI----APGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGP 259
PL+ AP A + PP AP+P A G + + GP
Sbjct: 113 PLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP 172
Query: 260 GPRAQHPGCRLRAGCEPSCGR-LGRGYQQRLPS-----RSPHAAPAAPAPALRSSFMFLA 313
GP PG G P G+ G G Q L S HAA A + L
Sbjct: 173 GP-GPGPG----PGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP 227
Query: 314 L-FPRKPGTL 322
L P PGT+
Sbjct: 228 LPKPAAPGTV 237
Score = 30.0 bits (66), Expect = 2.9
Identities = 38/146 (26%), Positives = 52/146 (35%), Gaps = 29/146 (19%)
Query: 101 PISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVSARVRAR 160
P + A A PA A G ++ A P P P + G V+G G A +A
Sbjct: 290 PPTAAPAVPPPAAAQNGGSAGAAPA---PAPAAGGPAG----VSGQPGPGAAAAAP---- 338
Query: 161 ASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVL 220
A G+ + + + PP A+G PA A ++ Q A P P
Sbjct: 339 ---APGVKAESPKRVVQAAPPAAQTLAASG-------PASTAASMVIGPTMQGALPSPAA 388
Query: 221 GRLPAPLPLQLRAGGASTGLAAPSPG 246
PAP G TGL + G
Sbjct: 389 VPPPAP--------GTPTGLPKGAAG 406
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 50.4 bits (119), Expect = 2e-06
Identities = 51/150 (34%), Positives = 61/150 (40%), Gaps = 16/150 (10%)
Query: 172 HRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQL 231
HRH S P PA PA PRP P AP APG QS P+P G +P+P
Sbjct: 20 HRHSSRAPGTRTPATPARS-----PRP-PLCAPRPAPGRAQS--PVPAAGAVPSPPAAAH 71
Query: 232 RAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPS 291
A A G P+PGR G+ + P R LR G +GRG + P
Sbjct: 72 PARPALRG-ETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG------GGMGRGRPGKGPP 124
Query: 292 RSP-HAAPAAPAPALRSSFMFLALFPRKPG 320
+P P AP R+ LA P G
Sbjct: 125 PNPSRRLPPAPPGGRRTWLSALATGPAAGG 154
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 50.4 bits (119), Expect = 2e-06
Identities = 68/243 (27%), Positives = 84/243 (34%), Gaps = 28/243 (11%)
Query: 92 ERTRTDRRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGASG 151
E + R P P PA + + A +PLP S S + V G GA
Sbjct: 569 EEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALY 628
Query: 152 AVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQS-----RPRPAPARAPLI 206
A AR AR + A G S E PPP PAT S A RAP
Sbjct: 629 ARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSP 688
Query: 207 APGAHQSAPPLPVLGRLPA----------------PLPLQLRAGGASTGLAAPSPGRGGK 250
P ++AP R P+ P P +T LAAPSP R
Sbjct: 689 PPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARA 748
Query: 251 QSEISFRGPGPRAQHPGCR------LRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAPAPA 304
++ G R + P R L A LGR + L ++ P PA P A
Sbjct: 749 RAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRA-EVALGAQGPREKPAPPQKA 807
Query: 305 LRS 307
RS
Sbjct: 808 KRS 810
Score = 31.2 bits (69), Expect = 1.3
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 23/120 (19%)
Query: 111 PAGAARGAASLALPT------RGVPLPLS----RWRTGSLTYVAGDLGASGAVSARVRAR 160
P G A +LA P+ R P PL R A L A R R
Sbjct: 728 PPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGR 787
Query: 161 ASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAP--LIAPGAHQSAPPLP 218
A +ALG E P PP A +S P +PARAP PG ++A LP
Sbjct: 788 AEVALGA------QGPREKPAPPQKAK-----RSVPPASPARAPPATETPGPEKAATDLP 836
Score = 28.5 bits (62), Expect = 8.4
Identities = 33/145 (22%), Positives = 45/145 (31%), Gaps = 10/145 (6%)
Query: 168 PIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPL 227
P+ C H P P + P P PL P + + A PLP
Sbjct: 562 PVYCVPHEEAPAESRDPEVPTVPAEAPAPSPV----PLTTPASAEEAIPLPASSDSERSA 617
Query: 228 PLQLRAGGASTGLAAPSPGRGGK-QSEISFRGPGPRAQH-----PGCRLRAGCEPSCGRL 281
GGA A R + + EI P + P + G+
Sbjct: 618 SSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKH 677
Query: 282 GRGYQQRLPSRSPHAAPAAPAPALR 306
R PS P + AAP+P+ R
Sbjct: 678 SAAAAGRAPSPPPPGSEAAPSPSKR 702
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 50.4 bits (119), Expect = 2e-06
Identities = 68/243 (27%), Positives = 84/243 (34%), Gaps = 28/243 (11%)
Query: 92 ERTRTDRRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGASG 151
E + R P P PA + + A +PLP S S + V G GA
Sbjct: 564 EEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALY 623
Query: 152 AVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQS-----RPRPAPARAPLI 206
A AR AR + A G S E PPP PAT S A RAP
Sbjct: 624 ARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSP 683
Query: 207 APGAHQSAPPLPVLGRLPA----------------PLPLQLRAGGASTGLAAPSPGRGGK 250
P ++AP R P+ P P +T LAAPSP R
Sbjct: 684 PPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARA 743
Query: 251 QSEISFRGPGPRAQHPGCR------LRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAPAPA 304
++ G R + P R L A LGR + L ++ P PA P A
Sbjct: 744 RAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRA-EVALGAQGPREKPAPPQKA 802
Query: 305 LRS 307
RS
Sbjct: 803 KRS 805
Score = 31.2 bits (69), Expect = 1.3
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 23/120 (19%)
Query: 111 PAGAARGAASLALPT------RGVPLPLS----RWRTGSLTYVAGDLGASGAVSARVRAR 160
P G A +LA P+ R P PL R A L A R R
Sbjct: 723 PPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGR 782
Query: 161 ASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAP--LIAPGAHQSAPPLP 218
A +ALG E P PP A +S P +PARAP PG ++A LP
Sbjct: 783 AEVALGA------QGPREKPAPPQKAK-----RSVPPASPARAPPATETPGPEKAATDLP 831
Score = 28.5 bits (62), Expect = 8.4
Identities = 33/145 (22%), Positives = 45/145 (31%), Gaps = 10/145 (6%)
Query: 168 PIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPL 227
P+ C H P P + P P PL P + + A PLP
Sbjct: 557 PVYCVPHEEAPAESRDPEVPTVPAEAPAPSPV----PLTTPASAEEAIPLPASSDSERSA 612
Query: 228 PLQLRAGGASTGLAAPSPGRGGK-QSEISFRGPGPRAQH-----PGCRLRAGCEPSCGRL 281
GGA A R + + EI P + P + G+
Sbjct: 613 SSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKH 672
Query: 282 GRGYQQRLPSRSPHAAPAAPAPALR 306
R PS P + AAP+P+ R
Sbjct: 673 SAAAAGRAPSPPPPGSEAAPSPSKR 697
>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
potassium channel 3 [Homo sapiens]
Length = 774
Score = 48.9 bits (115), Expect = 6e-06
Identities = 48/139 (34%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQL-----RA 233
P P P +PAT A+S R A + A + P A P RLPAP L RA
Sbjct: 630 PLPLSPDSPATLLARSAWRSAGSPASPLVP---VRAGPWASTSRLPAPPARTLHASLSRA 686
Query: 234 GGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPS-- 291
G + L P PG GG++ + RG A P RA + S GR G G ++ PS
Sbjct: 687 GRSQVSLLGPPPGGGGRR--LGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPPSGL 744
Query: 292 --RSPHAA----PAAPAPA 304
+ P A P P PA
Sbjct: 745 LAKPPRTAQPPRPPVPEPA 763
>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 47.4 bits (111), Expect = 2e-05
Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 39/178 (21%)
Query: 163 LALGLPIQC------------------HRHISTEPPPPPPAAPATGSAQSRPRPAPARAP 204
+ LGLP QC +R PPP PP A Q R RP RAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 205 LIAPGAHQSAPPLPVLGRLPAPLP-----LQLRAGGASTGLAAPSPG------------- 246
+ A ++ P L LG A P L++RAG A G A SP
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 247 ---RGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAP 301
R G S+ P PRA LR C C G G P S + P
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 47.4 bits (111), Expect = 2e-05
Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 39/178 (21%)
Query: 163 LALGLPIQC------------------HRHISTEPPPPPPAAPATGSAQSRPRPAPARAP 204
+ LGLP QC +R PPP PP A Q R RP RAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 205 LIAPGAHQSAPPLPVLGRLPAPLP-----LQLRAGGASTGLAAPSPG------------- 246
+ A ++ P L LG A P L++RAG A G A SP
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 247 ---RGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAP 301
R G S+ P PRA LR C C G G P S + P
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 47.4 bits (111), Expect = 2e-05
Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 39/178 (21%)
Query: 163 LALGLPIQC------------------HRHISTEPPPPPPAAPATGSAQSRPRPAPARAP 204
+ LGLP QC +R PPP PP A Q R RP RAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 205 LIAPGAHQSAPPLPVLGRLPAPLP-----LQLRAGGASTGLAAPSPG------------- 246
+ A ++ P L LG A P L++RAG A G A SP
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 247 ---RGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAP 301
R G S+ P PRA LR C C G G P S + P
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 177 TEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGA 236
++ P P PA AQ RP +PA AP P ++ P+P PAP P AG
Sbjct: 5 SQAPTPAPA------AQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAG-- 56
Query: 237 STGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRA 272
STG P G GG S PG Q + +A
Sbjct: 57 STGTGGPGVGSGGAGSGGDPARPGLSQQQRASQRKA 92
Score = 29.3 bits (64), Expect = 4.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 168 PIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPG 209
P+Q T P P PA+ + P PAPA AP + G
Sbjct: 18 PLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTG 59
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 47.0 bits (110), Expect = 2e-05
Identities = 53/183 (28%), Positives = 65/183 (35%), Gaps = 42/183 (22%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAH-----QSAPPLPVLGR----------- 222
P PP P T A + PRPAP P P A S PP P G
Sbjct: 141 PAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAP 200
Query: 223 ---LPA--------PLPLQLRAGGASTGLAAPSPGRGG-----------KQSEISFRGPG 260
LP P P A AS A+P+P G ++S++ G
Sbjct: 201 RPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDLRQEHFDRLIRRSKLWCYAKG 260
Query: 261 PRAQHPGCRLRAGCEPSCG-RLGRGYQQRLPSRSPHAA-PAAPAPAL--RSSFMFLALFP 316
P R P+ G G ++RLP+ P A P PAP L S+F L FP
Sbjct: 261 FALDTPSLRRGPERPPAKGPARGAAKKRRLPAPPPRTAQPRRPAPTLPTTSTFSLLNCFP 320
Query: 317 RKP 319
P
Sbjct: 321 CPP 323
Score = 28.9 bits (63), Expect = 6.4
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 26/165 (15%)
Query: 179 PPPPPPAAPATGSAQSRP---------RPAPARAPLIAPGAHQSAPPLPVLGRLPAPL-- 227
P P P P G+ + P A RA + PG + A PVL APL
Sbjct: 20 PCSPTPRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGPGELAARSPVLRGPQAPLRP 79
Query: 228 ----PLQLRAGGASTGLAAPSPGRGGKQSEISF---RGP----GPRAQHPGCRLRAGCEP 276
P L+ A TG G+ ++++ RG G H G R C P
Sbjct: 80 GGWAPDGLKHLWAPTGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFGVR---SCAP 136
Query: 277 SCGRLGRGYQQRLPSRSPHAAPAAPAPALRSSFMFLALFPRKPGT 321
GR R + S +AP PAP L A P++P +
Sbjct: 137 P-GRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSS 180
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 46.6 bits (109), Expect = 3e-05
Identities = 61/216 (28%), Positives = 75/216 (34%), Gaps = 41/216 (18%)
Query: 111 PAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGAS-GAVSARVRARASLALGLPI 169
P A G S TRG P L + Y A + S G + A LP
Sbjct: 384 PPSAQDGLGS----TRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGPPPARLPQ 439
Query: 170 QCHRHISTEPPPP--PPAA---------PATGSAQSRPRPAPARAPLIAPGAHQSAPPLP 218
+ P PP P AA P+ G P+ AP P + P A S +
Sbjct: 440 LWDPTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLCLPQSAPLPWPQVLPTARPSPHGME 499
Query: 219 VLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRG--PGPRAQHPGCRLRAGCEP 276
+L RLP P AGG +GG Q + G PGPR + P R G P
Sbjct: 500 MLSRLPFP------AGGPE--------WQGGSQGALGTAGKTPGPREKLPAVRSSQGGSP 545
Query: 277 SC----GRLGRGYQQRL-----PSRSPHAAPAAPAP 303
+ G G Q P SPH P+ P P
Sbjct: 546 ALFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSLPPP 581
Score = 32.3 bits (72), Expect = 0.58
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 177 TEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGA 236
TE PPAA A S P + P P H + P P G L P
Sbjct: 1214 TEALRSPPAACAGEMGASPGLLIPEQPP---PSRHDTGTPKPS-GSLANTAP---HGSSP 1266
Query: 237 STGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPS 277
+ G+ + G GG Q+ +S P A+ PG L PS
Sbjct: 1267 TPGVGSLLGGPGGTQAPVSHNSKDPPARQPGEFLAPVANPS 1307
Score = 31.2 bits (69), Expect = 1.3
Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 77 SLAPQVFLRMQPDVQERTRTDRRSPIS---PARACGGPAGAARGAASLALPTRGVPLPLS 133
S AP PD Q DR P R+ G A + RG L L
Sbjct: 895 SKAPPPLPAATPDPQTPRPGDRGCPARGRPKTRSLGLAPTEADAPSQGRQQRRGKQLKLF 954
Query: 134 RWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQ 193
R S G G ++ +R R + LG E PPP P P T +
Sbjct: 955 RKDLDSGGAAEGSGSGGGGRASGLRPRRNDGLG-----------ERPPPRPRRPRTQAPG 1003
Query: 194 SRPRPAPARAPLIA 207
SR PAP R P A
Sbjct: 1004 SRADPAP-RVPRAA 1016
Score = 29.3 bits (64), Expect = 4.9
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 25/122 (20%)
Query: 182 PPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGL- 240
P A P T + +PR + +PG H S PPL AGG + +
Sbjct: 6 PRGAPPPTMTGDLQPRQVAS-----SPG-HPSQPPLEDNTPATRTTKGAREAGGQAQAME 59
Query: 241 ---AAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAA 297
A P R G+ S RG P + PG RG Q P RSP A
Sbjct: 60 LPEAQPRQARDGELKPPSLRGQAPSST-PG--------------KRGSPQTPPGRSPLQA 104
Query: 298 PA 299
P+
Sbjct: 105 PS 106
Score = 29.3 bits (64), Expect = 4.9
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 179 PPPPPPAAPATGSAQSRPRPA---------PARAPLIAPGAHQSAPPLPVLGRLPAPLPL 229
P P PP + T Q P P A PGA+ PP P P+P
Sbjct: 206 PAPGPPQSRGTSPLQPGSYPEYQASGADSWPPAAENSFPGANFGVPPAE-----PEPIPK 260
Query: 230 QLRAGGASTGLAAPSP 245
R GG+ G++ P
Sbjct: 261 GSRPGGSPRGVSFQFP 276
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 46.6 bits (109), Expect = 3e-05
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 158 RARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSA--- 214
++ + L + P + ST PPPPPP SA+ P P P P + A +A
Sbjct: 401 QSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPP 460
Query: 215 PPLPVLGRL--PAPLPLQLRAGGASTGLAAPSP 245
PPLP LG + PAP PL G+ L P P
Sbjct: 461 PPLPGLGAMAPPAP-PLPPPLPGSCEFLPPPPP 492
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 21/70 (30%)
Query: 179 PPPPPPAAPATGSAQSRPR---------------PAPARAPLIAPGAHQ----SAPPLPV 219
PPPPPP P+ G A++ P PAP P + PG+ + PPLP
Sbjct: 439 PPPPPPPLPSVG-AKALPTAPPPPPLPGLGAMAPPAPPLPPPL-PGSCEFLPPPPPPLPG 496
Query: 220 LGRLPAPLPL 229
LG P P PL
Sbjct: 497 LGCPPPPPPL 506
Score = 32.7 bits (73), Expect = 0.44
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPP-LPVLGRLPAPLP 228
PP PP P GS + P P P PL G PP LP +G P P P
Sbjct: 471 PPAPPLPPPLPGSCEFLPPPPP---PLPGLGCPPPPPPLLPGMGWGPPPPP 518
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 46.6 bits (109), Expect = 3e-05
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 158 RARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSA--- 214
++ + L + P + ST PPPPPP SA+ P P P P + A +A
Sbjct: 401 QSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPP 460
Query: 215 PPLPVLGRL--PAPLPLQLRAGGASTGLAAPSP 245
PPLP LG + PAP PL G+ L P P
Sbjct: 461 PPLPGLGAMAPPAP-PLPPPLPGSCEFLPPPPP 492
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 21/70 (30%)
Query: 179 PPPPPPAAPATGSAQSRPR---------------PAPARAPLIAPGAHQ----SAPPLPV 219
PPPPPP P+ G A++ P PAP P + PG+ + PPLP
Sbjct: 439 PPPPPPPLPSVG-AKALPTAPPPPPLPGLGAMAPPAPPLPPPL-PGSCEFLPPPPPPLPG 496
Query: 220 LGRLPAPLPL 229
LG P P PL
Sbjct: 497 LGCPPPPPPL 506
Score = 32.7 bits (73), Expect = 0.44
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPP-LPVLGRLPAPLP 228
PP PP P GS + P P P PL G PP LP +G P P P
Sbjct: 471 PPAPPLPPPLPGSCEFLPPPPP---PLPGLGCPPPPPPLLPGMGWGPPPPP 518
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 46.6 bits (109), Expect = 3e-05
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGAST 238
PPPPPP P S Q P AP +AP + PG+ + P P+ G LP P P G
Sbjct: 542 PPPPPP-LPGLPSPQEAPPSAPPQAPPL-PGSPEPPPAPPLPGDLPPPPPPPPPPPGTDG 599
Query: 239 GLAAPSP-----------GRGGKQSEISFRGPGPRAQHP 266
+ P P G + SE+ GPG +A+ P
Sbjct: 600 PVPPPPPPPPPPPGGPPDALGRRDSEL---GPGVKAKKP 635
Score = 30.0 bits (66), Expect = 2.9
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 175 ISTEPPPPPPAAPATGSAQS----RPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQ 230
+S E P A P+ G A + P+P AP P + PP P L LP+P
Sbjct: 499 VSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSP---- 554
Query: 231 LRAGGASTGLAAPSPG 246
A ++ A P PG
Sbjct: 555 QEAPPSAPPQAPPLPG 570
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 46.2 bits (108), Expect = 4e-05
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 110 GPAGAARGAASLALPTRGVPLPLSRWRT-----GSLTYVAGDLGASGAVSARVRARASLA 164
GP+ A R A P PL W + GS + + + A AR R+ S++
Sbjct: 50 GPSNARRSFA---------PFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMS 100
Query: 165 LGLPIQCHRHISTEPPPPPP--AAPATGSAQSRP-RPAPARAPLIAPGAHQSAPPLP--- 218
H H ++ PPPPPP A P G A P P+ RAP+ P QS+ P
Sbjct: 101 -----PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRC 155
Query: 219 ---VLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCE 275
+ PAP R G + PS RG +S L GCE
Sbjct: 156 HCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRS----------------TLGVGCE 199
Query: 276 PSCGRLGRGY 285
P+ G+
Sbjct: 200 PAASPAAGGW 209
Score = 28.9 bits (63), Expect = 6.4
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 98 RRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLG-ASGAVSAR 156
RR+PI+ R C G+ R ++P G P P S+ L AG++ +AR
Sbjct: 135 RRAPINQPRRCQSSGGSPRRCHCSSVP--GAPAPASQ-----LPRPAGEVNKVKYPSAAR 187
Query: 157 VRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAP 200
R++L +G EP P A G S R P
Sbjct: 188 GPGRSTLGVG----------CEPAASPAAGGWAGVTSSDSRAVP 221
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 46.2 bits (108), Expect = 4e-05
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 110 GPAGAARGAASLALPTRGVPLPLSRWRT-----GSLTYVAGDLGASGAVSARVRARASLA 164
GP+ A R A P PL W + GS + + + A AR R+ S++
Sbjct: 50 GPSNARRSFA---------PFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMS 100
Query: 165 LGLPIQCHRHISTEPPPPPP--AAPATGSAQSRP-RPAPARAPLIAPGAHQSAPPLP--- 218
H H ++ PPPPPP A P G A P P+ RAP+ P QS+ P
Sbjct: 101 -----PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRC 155
Query: 219 ---VLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCE 275
+ PAP R G + PS RG +S L GCE
Sbjct: 156 HCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRS----------------TLGVGCE 199
Query: 276 PSCGRLGRGY 285
P+ G+
Sbjct: 200 PAASPAAGGW 209
Score = 28.9 bits (63), Expect = 6.4
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 98 RRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLG-ASGAVSAR 156
RR+PI+ R C G+ R ++P G P P S+ L AG++ +AR
Sbjct: 135 RRAPINQPRRCQSSGGSPRRCHCSSVP--GAPAPASQ-----LPRPAGEVNKVKYPSAAR 187
Query: 157 VRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAP 200
R++L +G EP P A G S R P
Sbjct: 188 GPGRSTLGVG----------CEPAASPAAGGWAGVTSSDSRAVP 221
>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 45.8 bits (107), Expect = 5e-05
Identities = 54/184 (29%), Positives = 69/184 (37%), Gaps = 24/184 (13%)
Query: 135 WRTGSLTYVAGDLGASGAVSARVRARASLAL-GLP-----IQCHRHISTEPPPPPPAA-- 186
WR L +V +GA + R A +A G P RH PPP P+
Sbjct: 16 WRRMVLNFVFQPSARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSR 75
Query: 187 PATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGLAAPSPG 246
P + P PARAP IA + P +PV P LP GG TG +P
Sbjct: 76 PLCAGSSCLATPEPARAPSIA----EPGPGIPVAAIKPVILP----GGGGCTGARTENPP 127
Query: 247 RGGKQSEISFRGPGPRAQHPGCRLRAGCE-----PSCGRLGRGYQQRLPSRSPHAAPAAP 301
+ + R P P AQ R R+G E P GR G + P AP
Sbjct: 128 LSPTRGDC--RVPVPAAQ-ISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ 184
Query: 302 APAL 305
P++
Sbjct: 185 PPSV 188
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 45.8 bits (107), Expect = 5e-05
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 118 AASLALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHIST 177
A+ ALP+ P + S + A A+ A +A A AS GL R S
Sbjct: 110 ASGAALPSAS---PSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSL 166
Query: 178 EPPPPP------PAAPATGSAQSRPRP---APARAPLIAPGAHQSAP 215
PPPPP P+A A + P+P P R P+ PG QS P
Sbjct: 167 SPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPP 213
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 45.4 bits (106), Expect = 7e-05
Identities = 32/79 (40%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQ---LRAGG 235
PPPPPP PATG + P P P P PP P G PAP PL + AGG
Sbjct: 367 PPPPPP--PATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGG 424
Query: 236 ASTGLAAPSPGRGGKQSEI 254
AP GRG +I
Sbjct: 425 -----LAPGGGRGALLDQI 438
Score = 38.9 bits (89), Expect = 0.006
Identities = 44/153 (28%), Positives = 50/153 (32%), Gaps = 30/153 (19%)
Query: 178 EPPPPP----------PAAPATGSAQSRPRPAPARAPLIA-PGAHQSAPPLPVLGRLPAP 226
EP PPP P P G + R P P IA P PP P G P P
Sbjct: 311 EPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPP 370
Query: 227 LPLQLRAGGASTGLAAPSPGRGG----------KQSEISFRGPGPRAQHPGCRLRAGCEP 276
P A G S L P PG GG S GP P P G P
Sbjct: 371 PP---PATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAP 427
Query: 277 SCGR------LGRGYQQRLPSRSPHAAPAAPAP 303
GR + +G Q +P ++ P P
Sbjct: 428 GGGRGALLDQIRQGIQLNKTPGAPESSALQPPP 460
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 45.1 bits (105), Expect = 9e-05
Identities = 73/227 (32%), Positives = 85/227 (37%), Gaps = 43/227 (18%)
Query: 95 RTDRRSPISPA-RAC---GGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGAS 150
R RRS PA R C G P +A+G P P R R L +G
Sbjct: 48 RACRRSLACPAVRGCKREGSPGVSAQGGPLEGTPRPAAPGAAPRPRRQRLRRRRAKVGGW 107
Query: 151 GAVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGA 210
G AR R + P + R P P A A G+A + R R G
Sbjct: 108 GCARARGLDRRA-----PGEGGRSPGGGLEPSPGARGAVGAAPAAARHRKPR------GR 156
Query: 211 HQSAPPLPVLGRLPAPLPLQLRAGGASTGLAAPS----PGRGGKQSEI--------SFRG 258
+ AP +P L LP LP RAGGA+ G P PGR G Q S RG
Sbjct: 157 SRRAPQMP-LRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSGLQGAAVPPPVGVPSLRG 215
Query: 259 ---------PGPRAQHPGCRLRAG----CEPSCGRLGRGYQQRLPSR 292
PR + P LRAG C PS GR G + LPSR
Sbjct: 216 RPWEALATAATPR-RCPLQLLRAGPALHCPPSVGR-GFVFIATLPSR 260
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 45.1 bits (105), Expect = 9e-05
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
P PPP + S P P R P+ + H P V G P P + + G A++
Sbjct: 743 PVPPPVDDTWLQSASSHSPTPQRRPVSS--IHPPGRPPAVRGPTPGPPLIPVPVGAAASF 800
Query: 240 LAAPSPGRGGKQSEIS----FRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPH 295
A P P R G QS + F P P+ R+ G P +PSR P
Sbjct: 801 SAPPIPSRPGPQSVFANSDLFPAP-PQIPSRPVRIPPGIPPG-----------VPSRRPP 848
Query: 296 AAPAAP 301
AAP+ P
Sbjct: 849 AAPSRP 854
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 45.1 bits (105), Expect = 9e-05
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
P PPP + S P P R P+ + H P V G P P + + G A++
Sbjct: 747 PVPPPVDDTWLQSASSHSPTPQRRPVSS--IHPPGRPPAVRGPTPGPPLIPVPVGAAASF 804
Query: 240 LAAPSPGRGGKQSEIS----FRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPH 295
A P P R G QS + F P P+ R+ G P +PSR P
Sbjct: 805 SAPPIPSRPGPQSVFANSDLFPAP-PQIPSRPVRIPPGIPPG-----------VPSRRPP 852
Query: 296 AAPAAP 301
AAP+ P
Sbjct: 853 AAPSRP 858
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 45.1 bits (105), Expect = 9e-05
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
P PPP + S P P R P+ + H P V G P P + + G A++
Sbjct: 747 PVPPPVDDTWLQSASSHSPTPQRRPVSS--IHPPGRPPAVRGPTPGPPLIPVPVGAAASF 804
Query: 240 LAAPSPGRGGKQSEIS----FRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPH 295
A P P R G QS + F P P+ R+ G P +PSR P
Sbjct: 805 SAPPIPSRPGPQSVFANSDLFPAP-PQIPSRPVRIPPGIPPG-----------VPSRRPP 852
Query: 296 AAPAAP 301
AAP+ P
Sbjct: 853 AAPSRP 858
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 45.1 bits (105), Expect = 9e-05
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
P PPP + S P P R P+ + H P V G P P + + G A++
Sbjct: 743 PVPPPVDDTWLQSASSHSPTPQRRPVSS--IHPPGRPPAVRGPTPGPPLIPVPVGAAASF 800
Query: 240 LAAPSPGRGGKQSEIS----FRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPH 295
A P P R G QS + F P P+ R+ G P +PSR P
Sbjct: 801 SAPPIPSRPGPQSVFANSDLFPAP-PQIPSRPVRIPPGIPPG-----------VPSRRPP 848
Query: 296 AAPAAP 301
AAP+ P
Sbjct: 849 AAPSRP 854
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 178 EPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGAS 237
+PPPPPP AP G + P+ P RA + P A P L + G AS
Sbjct: 34 QPPPPPPPAPPPGPGPAPPQ-HPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAAS 92
Query: 238 TGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAA 297
T +P+ G + + S GP A+ P ++ C + G + S A
Sbjct: 93 TAKGSPNGECGRGEPQCSPAGPEGPARGP--KVSFSCRGAASGPAPGPGPAEEAGSEEAG 150
Query: 298 PAAPAPALRSSFM 310
PA ++SFM
Sbjct: 151 PAGEPRGSQASFM 163
Score = 37.4 bits (85), Expect = 0.018
Identities = 41/131 (31%), Positives = 45/131 (34%), Gaps = 23/131 (17%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGAST 238
P P PP P Q +P P P PP P G PAP RA
Sbjct: 18 PAPGPPPPPPPAPPQQQPPPPP--------------PPAPPPGPGPAPPQHPPRAEALPP 63
Query: 239 GLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAP 298
A RG +S S G R PG A P+ G GRG Q P A P
Sbjct: 64 EAADEGGPRGRLRSRDSSCG---RPGTPGAASTAKGSPN-GECGRGEPQCSP-----AGP 114
Query: 299 AAPAPALRSSF 309
PA + SF
Sbjct: 115 EGPARGPKVSF 125
Score = 36.6 bits (83), Expect = 0.031
Identities = 49/149 (32%), Positives = 59/149 (39%), Gaps = 35/149 (23%)
Query: 163 LALGLPIQCHRHISTEPPPPPPAAPATG---SAQSRPRPAPARAPLIAPGAHQSAPPLPV 219
LALG P R + PP P PAA + G A PA RAP +P + P P+
Sbjct: 750 LALGSP----RLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSP--YGGLPAAPL 803
Query: 220 LGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCG 279
G PA LP + R AS L+A P + PGP A S
Sbjct: 804 AG--PA-LPAR-RLSRASRPLSASQP-------SLPHGAPGPAAS------TRPASSSTP 846
Query: 280 RLGRGYQQRLPSRSPHAAPAAPAPALRSS 308
RLG +P A AAP+P R S
Sbjct: 847 RLG---------PTPAARAAAPSPDRRDS 866
Score = 32.0 bits (71), Expect = 0.76
Identities = 40/142 (28%), Positives = 50/142 (35%), Gaps = 29/142 (20%)
Query: 179 PPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGAST 238
PPPPPP + A + A + P +A P++G L P +R
Sbjct: 715 PPPPPPPQVTSAIATLQQAAAMSFCPQVA---------RPLVGPLALGSPRLVRRPPPGP 765
Query: 239 GLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAP 298
AA SP GP P A PG P+ R R +P A P
Sbjct: 766 APAAASP------------GPPPPASPPGA-------PASPRAPRTSPYGGLPAAPLAGP 806
Query: 299 AAPAPAL-RSSFMFLALFPRKP 319
A PA L R+S A P P
Sbjct: 807 ALPARRLSRASRPLSASQPSLP 828
Score = 28.5 bits (62), Expect = 8.4
Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 95 RTDRRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLGASGAVS 154
R RR P PA PA A+ G A P G P RT + A A+
Sbjct: 756 RLVRRPPPGPA-----PAAASPGPPPPASPP-GAPASPRAPRTSPYGGLPAAPLAGPALP 809
Query: 155 ARVRARASLALGLPIQCHRHISTEPPPPPPAAPATGSA-QSRPRPAPARAPLIAPGAHQS 213
AR +RAS L H + P P PA+ S + P PA ARA +P S
Sbjct: 810 ARRLSRASRPLSASQPSLPHGA--PGPAASTRPASSSTPRLGPTPA-ARAAAPSPDRRDS 866
Query: 214 APP 216
A P
Sbjct: 867 ASP 869
>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 44.7 bits (104), Expect = 1e-04
Identities = 53/184 (28%), Positives = 69/184 (37%), Gaps = 24/184 (13%)
Query: 135 WRTGSLTYVAGDLGASGAVSARVRARASLAL-GLP-----IQCHRHISTEPPPPPPAA-- 186
WR L +V +GA + R A +A G P RH PPP P+
Sbjct: 16 WRRMVLNFVFQPSARAGAGAGRSPAARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSR 75
Query: 187 PATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGLAAPSPG 246
P + P PAR+P IA + P +PV P LP GG TG +P
Sbjct: 76 PLCAGSSCLATPEPARSPSIA----EPGPGIPVAAIKPVILP----GGGGCTGARTENPP 127
Query: 247 RGGKQSEISFRGPGPRAQHPGCRLRAGCE-----PSCGRLGRGYQQRLPSRSPHAAPAAP 301
+ + R P P AQ R R+G E P GR G + P AP
Sbjct: 128 LSPTRGDC--RVPVPAAQ-ISLRWRSGREARPGGPQAGRAGDPKADQAMHLQPAWAPKLQ 184
Query: 302 APAL 305
P++
Sbjct: 185 PPSV 188
>gi|239582763 ral guanine nucleotide dissociation stimulator-like 3
isoform 2 [Homo sapiens]
Length = 710
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 149 ASGAVSARVRARASLALGLPIQCHRHISTEP------PPPPPAAPATGSAQSRPRP--AP 200
AS S R+R R SL L + R S+ P P P ++ + GS S PR AP
Sbjct: 507 ASCPSSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAP 566
Query: 201 ARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGLAA 242
A +P +PG + LP+ LP+P P L G L A
Sbjct: 567 AGSPPASPGPQGPSTKLPLSLDLPSPRPFALPLGSPRIPLPA 608
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 31/173 (17%)
Query: 167 LPIQCHRHISTEPPPPPPAA---PATGSAQSRPRPAPARAPLI----APGAHQSAPPLPV 219
LP R + +PPPPPP P+ P P P + P A APP P
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPP 311
Query: 220 LGRLPAPLPLQLRAGG--------------ASTGLAAPSPGRGGK-QSEISFRGPGPRAQ 264
P P PL + G +S+ PSPGR G S R P P
Sbjct: 312 PPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD 371
Query: 265 HPGCRLRAGCEPSCGRLGRGYQ-----QRLPSR----SPHAAPAAPAPALRSS 308
PG P R G + +LPSR SP + P P P R S
Sbjct: 372 PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Score = 43.5 bits (101), Expect = 3e-04
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 177 TEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGA 236
+ PP PP +T + P P R P+ +PG H+S PP P R+P P P G
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPG-HRSGPPEPQRNRMPPPRP---DVGSK 179
Query: 237 STGLAAPSPGRGGK-QSEISFRGP-----GPRAQHPG 267
+ P P QS RG GPR PG
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPG 216
Score = 30.4 bits (67), Expect = 2.2
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 25/97 (25%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
PPPP P P P R P PG PP P + R ST
Sbjct: 358 PPPPSERP----------PPPVRDP---PGRSGPLPPPPPVSR------------NGSTS 392
Query: 240 LAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEP 276
A P+ + +S + GPR P R AG P
Sbjct: 393 RALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 31/173 (17%)
Query: 167 LPIQCHRHISTEPPPPPPAA---PATGSAQSRPRPAPARAPLI----APGAHQSAPPLPV 219
LP R + +PPPPPP P+ P P P + P A APP P
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPP 311
Query: 220 LGRLPAPLPLQLRAGG--------------ASTGLAAPSPGRGGK-QSEISFRGPGPRAQ 264
P P PL + G +S+ PSPGR G S R P P
Sbjct: 312 PPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD 371
Query: 265 HPGCRLRAGCEPSCGRLGRGYQ-----QRLPSR----SPHAAPAAPAPALRSS 308
PG P R G + +LPSR SP + P P P R S
Sbjct: 372 PPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS 424
Score = 43.5 bits (101), Expect = 3e-04
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 177 TEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGA 236
+ PP PP +T + P P R P+ +PG H+S PP P R+P P P G
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPG-HRSGPPEPQRNRMPPPRP---DVGSK 179
Query: 237 STGLAAPSPGRGGK-QSEISFRGP-----GPRAQHPG 267
+ P P QS RG GPR PG
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPG 216
Score = 30.4 bits (67), Expect = 2.2
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 25/97 (25%)
Query: 180 PPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTG 239
PPPP P P P R P PG PP P + R ST
Sbjct: 358 PPPPSERP----------PPPVRDP---PGRSGPLPPPPPVSR------------NGSTS 392
Query: 240 LAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEP 276
A P+ + +S + GPR P R AG P
Sbjct: 393 RALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,212,881
Number of Sequences: 37866
Number of extensions: 1095344
Number of successful extensions: 19669
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 1290
Number of HSP's that attempted gapping in prelim test: 10724
Number of HSP's gapped (non-prelim): 6478
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.