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Search of human proteins with 239753091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753091 PREDICTED: hypothetical protein [Homo sapiens]
(383 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753091 PREDICTED: hypothetical protein [Homo sapiens] 760 0.0
gi|169162091 PREDICTED: similar to Kinesin-Like Protein family m... 742 0.0
gi|239741525 PREDICTED: hypothetical protein [Homo sapiens] 727 0.0
gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] 36 0.066
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 34 0.25
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.43
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 33 0.56
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 33 0.56
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 33 0.56
gi|4502483 Ras association (RalGDS/AF-6) domain family (N-termin... 32 0.73
gi|145580626 E2F transcription factor 7 [Homo sapiens] 32 0.73
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 32 0.73
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 32 0.73
gi|5453613 CD7 antigen precursor [Homo sapiens] 32 0.96
gi|116284392 mucin 2 precursor [Homo sapiens] 32 1.3
gi|150456473 janus kinase and microtubule interacting protein 1 ... 32 1.3
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 32 1.3
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 32 1.3
gi|238624257 insulin-like growth factor 2 mRNA binding protein 1... 31 1.6
gi|56237027 insulin-like growth factor 2 mRNA binding protein 1 ... 31 1.6
gi|156938343 talin 2 [Homo sapiens] 31 1.6
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 31 1.6
gi|15431318 keratin 38 [Homo sapiens] 31 2.1
gi|167001141 glypican 1 precursor [Homo sapiens] 31 2.1
gi|167234405 hypothetical protein LOC284325 [Homo sapiens] 31 2.1
gi|116235460 YTH domain family, member 3 [Homo sapiens] 30 2.8
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 30 2.8
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 30 2.8
gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo sapi... 30 3.6
gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo sapi... 30 3.6
>gi|239753091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 383
Score = 760 bits (1962), Expect = 0.0
Identities = 383/383 (100%), Positives = 383/383 (100%)
Query: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP
Sbjct: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
Query: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG
Sbjct: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
Query: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVL 180
LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVL
Sbjct: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVL 180
Query: 181 LKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
LKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM
Sbjct: 181 LKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
Query: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV 300
NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV
Sbjct: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV 300
Query: 301 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 360
PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS
Sbjct: 301 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 360
Query: 361 QMFKDLGDLRESSLWTLKMTLLL 383
QMFKDLGDLRESSLWTLKMTLLL
Sbjct: 361 QMFKDLGDLRESSLWTLKMTLLL 383
>gi|169162091 PREDICTED: similar to Kinesin-Like Protein family
member (klp-6) [Homo sapiens]
Length = 609
Score = 742 bits (1915), Expect = 0.0
Identities = 373/376 (99%), Positives = 375/376 (99%)
Query: 8 RTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP 67
+THGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP
Sbjct: 234 QTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP 293
Query: 68 VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG 127
VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG
Sbjct: 294 VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG 353
Query: 128 HILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVLLKASLAK 187
HILVDTKKISTVKDISQAASNQIPELYLKLL+LEQETEPLRNINRALREENVLLKASLAK
Sbjct: 354 HILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAK 413
Query: 188 IASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL 247
ASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL
Sbjct: 414 TASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL 473
Query: 248 FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRH 307
FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRH
Sbjct: 474 FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRH 533
Query: 308 TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG 367
TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG
Sbjct: 534 TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG 593
Query: 368 DLRESSLWTLKMTLLL 383
DLRESSLWTLKMTLLL
Sbjct: 594 DLRESSLWTLKMTLLL 609
>gi|239741525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 372
Score = 727 bits (1877), Expect = 0.0
Identities = 370/383 (96%), Positives = 371/383 (96%), Gaps = 11/383 (2%)
Query: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP
Sbjct: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
Query: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG
Sbjct: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
Query: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVL 180
LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLL+LEQETEPLRNINRALREENVL
Sbjct: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVL 180
Query: 181 LKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
LKASLAK ASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM
Sbjct: 181 LKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
Query: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV 300
NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL LSAV
Sbjct: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL-----------LSAV 289
Query: 301 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 360
PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS
Sbjct: 290 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 349
Query: 361 QMFKDLGDLRESSLWTLKMTLLL 383
QMFKDLGDLRESSLWTLKMTLLL
Sbjct: 350 QMFKDLGDLRESSLWTLKMTLLL 372
>gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]
Length = 640
Score = 35.8 bits (81), Expect = 0.066
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 278 EEALLDLLCERESAALSGRLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIP 337
++A + L R L+G L+ P S + LP P +A+A+P+PP L S LP P
Sbjct: 333 KKARISHLTNRVPPTLNGHLN----PTSEKSAAGLPLPPAAAAIPTPPPLPSTYLPISHP 388
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 33.9 bits (76), Expect = 0.25
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 231 KALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERES 290
+ +++ + +N R +L + QPP+ + T + + A QG+ A+L+ + E
Sbjct: 766 RRVRLLRREINALRQKLAQPPPPQPPSLNKT----VSNGELPAGPQGDAAVLEQALQEEP 821
Query: 291 AALSGRL-SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVD 349
R S +P PP+ T P + P PPTL + + P S+ +L P++V+
Sbjct: 822 EDDGDRDDSKLPPPPTLEPTGPAPSLSEQESPPEPPTL--KPINDSKPPSR-FLKPRKVE 878
Query: 350 Q 350
+
Sbjct: 879 E 879
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 33.1 bits (74), Expect = 0.43
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 297 LSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 348
LS VPSPPS + P S VPSPP+ + L G+PS PP +V
Sbjct: 289 LSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDI--PLLSGVPS-----PPSDV 333
Score = 32.0 bits (71), Expect = 0.96
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 297 LSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLP--PQEVDQML 352
LS VPSPPS P S VPSPP+ +S P +PS +P P +V +L
Sbjct: 241 LSGVPSPPS-------DVPSLLSGVPSPPSDISP--PSDVPSLLSDVPSLPSDVPSLL 289
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 13/52 (25%)
Query: 297 LSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 348
LS VPSPPS P S VPSPP+ V +L G+PS PP +V
Sbjct: 153 LSGVPSPPS-------DVPSPPSDVPSPPSDVP-SLLSGVPS-----PPSDV 191
Score = 30.4 bits (67), Expect = 2.8
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 298 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 348
S VPSPPS + P S VPSPP+ V + P +PS PP +V
Sbjct: 161 SDVPSPPSDVPSPPSDVPSLLSGVPSPPSDVP-SPPSDVPS-----PPSDV 205
Score = 29.6 bits (65), Expect = 4.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 298 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQML 352
S V SPPS + P S VPSPP+ V + P +PS PP +V +L
Sbjct: 133 SDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVP-SPPSDVPS-----PPSDVPSLL 181
Score = 29.6 bits (65), Expect = 4.8
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Query: 297 LSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLP 344
LS VPSPPS P S VPSPP+ V L G+PS +P
Sbjct: 323 LSGVPSPPS-------DVPSPPSDVPSPPSDV--PLLSGVPSPLSDVP 361
Score = 29.3 bits (64), Expect = 6.2
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 297 LSAVPSPPS--RHTTCSLPFPFS----ASAVPSPPTLVS------------RTLPQGIPS 338
LS VPSPPS +P P S S VPSPP+ V +LP +PS
Sbjct: 181 LSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPS 240
Query: 339 SQGY-LPPQEVDQML 352
G PP +V +L
Sbjct: 241 LSGVPSPPSDVPSLL 255
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 32.7 bits (73), Expect = 0.56
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 266 LGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRHTTCSLPFPFSA-----SA 320
LG E EE + L+D SA S S SP S+ ++ SL +A SA
Sbjct: 710 LGAKDTEHEESSNDDLVDF-----SALSSKNSSLSASPTSQQSSASLAAATAATEAGPSA 764
Query: 321 VPSPPTLVSRTLPQGIPSS 339
P + +S LPQG+P S
Sbjct: 765 TKPPNSKISGLLPQGLPGS 783
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 32.7 bits (73), Expect = 0.56
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 266 LGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRHTTCSLPFPFSA-----SA 320
LG E EE + L+D SA S S SP S+ ++ SL +A SA
Sbjct: 710 LGAKDTEHEESSNDDLVDF-----SALSSKNSSLSASPTSQQSSASLAAATAATEAGPSA 764
Query: 321 VPSPPTLVSRTLPQGIPSS 339
P + +S LPQG+P S
Sbjct: 765 TKPPNSKISGLLPQGLPGS 783
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 32.7 bits (73), Expect = 0.56
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 242 TARGQLFRLRRHQP-PTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV 300
+A Q F LR +P P +A LGD + + ++ R S A S A
Sbjct: 876 SAEAQAFLLRTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRHAPRPSDAPS----AS 931
Query: 301 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQG---------IPSSQGYLPPQEVDQM 351
P+P + TT S FP + PP+ R L G P+++ P+E +
Sbjct: 932 PTPSANSTTQSQTFPCPQAPSQHPPSPPKRCLSYGGTSQLRVPEEPAAEEPASPEESSGL 991
Query: 352 LRPFIHQRSQMFKDLGDLRESSLWTLKMTL 381
+HQ S+ L + E L L L
Sbjct: 992 --SLLHQESKRRAMLAAVLEQELPALAENL 1019
>gi|4502483 Ras association (RalGDS/AF-6) domain family (N-terminal)
member 7 isoform 1 [Homo sapiens]
Length = 373
Score = 32.3 bits (72), Expect = 0.73
Identities = 40/200 (20%), Positives = 71/200 (35%), Gaps = 35/200 (17%)
Query: 158 LRLEQETEPLRNI---NRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPSAGE 214
LR+++ E L + + LR E + A++ + A + ++ + AQ +
Sbjct: 160 LRVQRNAEELGHEAFWEQELRREQAREREGQARLQALSAATAEHAARLQALDAQARALEA 219
Query: 215 MSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAE 274
Q+ + G +A A + +Q + Q AE
Sbjct: 220 ELQLAAEAPGPPSPMASATERLHQDLAVQERQ-------------------------SAE 254
Query: 275 EQGEEALLDLLCERESAALSGRLSAVPSPPSRHTTCSLP--FPFSASAVPSPPTLVSRTL 332
QG AL+ E AL + + C+L + +A+P PP
Sbjct: 255 VQGSLALVSRALEAAERALQAQAQELEELNRELRQCNLQQFIQQTGAALPPPPRP----- 309
Query: 333 PQGIPSSQGYLPPQEVDQML 352
+G P +QG LPP + +L
Sbjct: 310 DRGPPGTQGPLPPAREESLL 329
>gi|145580626 E2F transcription factor 7 [Homo sapiens]
Length = 911
Score = 32.3 bits (72), Expect = 0.73
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 272 EAEEQGEEALLDLLCERESAALSG---RLSAVPSPPS-RHTTCSLP-FPFSASAVPSP-- 324
E E E +LL LC + A L+G LS +PP+ ++ LP F +PSP
Sbjct: 694 ENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPL 753
Query: 325 ---PTLVSRTLPQGIPSSQGYLP 344
P L S +P + S+ G LP
Sbjct: 754 GPFPVLYSPAMPGPVSSTLGALP 776
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 32.3 bits (72), Expect = 0.73
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 140 KDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVLLKASLAKIASGQAPKPSNT 199
+++ + SN++ E KL+ +E+E E + R L+ E +KA LA Q KP
Sbjct: 620 ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLA-----QHVKPEEH 674
Query: 200 LKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL----RRHQP 255
++ Q +GE+ + T+ ++ L K ++ Y + Q L + H
Sbjct: 675 EQVKSRLEQ--KSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYV 732
Query: 256 P---TFDV-----TAFPELGDVYAEAEEQGEEALLD---LLCERESAALS-GRLSAVPSP 303
P + D+ +L + ++ E L+ LL E +S + RL V P
Sbjct: 733 PLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVP 792
Query: 304 PSRH 307
P +H
Sbjct: 793 PEKH 796
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 32.3 bits (72), Expect = 0.73
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 140 KDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVLLKASLAKIASGQAPKPSNT 199
+++ + SN++ E KL+ +E+E E + R L+ E +KA LA Q KP
Sbjct: 633 ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLA-----QHVKPEEH 687
Query: 200 LKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL----RRHQP 255
++ Q +GE+ + T+ ++ L K ++ Y + Q L + H
Sbjct: 688 EQVKSRLEQ--KSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYV 745
Query: 256 P---TFDV-----TAFPELGDVYAEAEEQGEEALLD---LLCERESAALS-GRLSAVPSP 303
P + D+ +L + ++ E L+ LL E +S + RL V P
Sbjct: 746 PLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVP 805
Query: 304 PSRH 307
P +H
Sbjct: 806 PEKH 809
>gi|5453613 CD7 antigen precursor [Homo sapiens]
Length = 240
Score = 32.0 bits (71), Expect = 0.96
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 296 RLSAVPSPPSRHTTCSLPFPFSASAVPSPP 325
R SA+P+PP T +LP P +ASA+P PP
Sbjct: 148 RASALPAPP---TGSALPDPQTASALPDPP 174
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 298 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLP---QGIPSSQGYLPPQEVDQMLRP 354
+ PSPP TT + P P + PSPPT TLP P + LPP P
Sbjct: 1718 TTTPSPPP--TTMTTPSP---TTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSP 1772
Query: 355 F 355
F
Sbjct: 1773 F 1773
>gi|150456473 janus kinase and microtubule interacting protein 1
isoform 1 [Homo sapiens]
Length = 831
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 152 ELYLKLLRLEQETEPLRNINRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPS 211
+L K+ RLE E L+N + +++N LL+ + ++ + P+ L+I+ S
Sbjct: 565 DLLEKIYRLEMEENQLKNEMQDAKDQNELLEFRVLELEERERRSPAFNLQITTFPENHSS 624
Query: 212 AGEMSQMCTQQAGSDRELAKALK 234
A + C Q+ D +++ +K
Sbjct: 625 A--LQLFCHQEGVKDVNVSELMK 645
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 31.6 bits (70), Expect = 1.3
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 15/91 (16%)
Query: 255 PPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRHTTCSLPF 314
PPT +A D ++ QG D ++S L A PSP
Sbjct: 600 PPTLPTSATSLASDSTFDSG-QGSTVYSDSQSSQQSVMLGSLADAAPSP----------- 647
Query: 315 PFSASAVPSPPTLVSRTLPQGIPSSQGYLPP 345
A V SPP LPQ +PS Y P
Sbjct: 648 ---AQCVCSPPVSEGPVLPQSLPSLGAYQQP 675
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 152 ELYLKLLRLEQETEPLRNINRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPS 211
+L LKL+ L Q E L N+ L++ L+ KIA G+ S ++ + ++
Sbjct: 330 QLRLKLVGLTQRIEELEETNKNLQKAEEELQELRDKIAKGECGNSSLMAEVENLRKRVLE 389
Query: 212 AGEMSQMCTQQAGSDRELAKALK 234
+ T+ REL K L+
Sbjct: 390 MEGKDEEITKTESQCRELRKKLQ 412
>gi|238624257 insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Homo sapiens]
Length = 438
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 314 FPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP------FIHQRSQMFKDLG 367
FP S+SAVP PP+ V+ P SS P QE+ Q+ P I ++ Q K L
Sbjct: 237 FPASSSAVPPPPSSVTGAAPY---SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 293
Query: 368 DLRESSL 374
+S+
Sbjct: 294 RFASASI 300
>gi|56237027 insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Homo sapiens]
Length = 577
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 314 FPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP------FIHQRSQMFKDLG 367
FP S+SAVP PP+ V+ P SS P QE+ Q+ P I ++ Q K L
Sbjct: 376 FPASSSAVPPPPSSVTGAAPY---SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 368 DLRESSL 374
+S+
Sbjct: 433 RFASASI 439
>gi|156938343 talin 2 [Homo sapiens]
Length = 2542
Score = 31.2 bits (69), Expect = 1.6
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 167 LRNINRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSD 226
L+NI+ A +LL A + G AP N L + A S ++ +CTQQA
Sbjct: 1307 LKNISMA--SSKLLLAAKSLSVDPG-APNAKNLLAAAAR-AVTESINQLITLCTQQAPGQ 1362
Query: 227 RELAKALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGE 278
+E AL+ + T +G L P D++ F + V ++ GE
Sbjct: 1363 KECDNALR----ELETVKGM---LDNPNEPVSDLSYFDCIESVMENSKVLGE 1407
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 134 KKISTVKDISQAASNQIPELYLKLLRLEQE-TEPLRNINRAL-REENVLLKASLAKIASG 191
K+++ ++ + S + EL + QE + ++N+ L RE+ +L +
Sbjct: 153 KQLADLQKLISTQSKKPLELREMVENQRQELSSEFEHLNQFLDREQQAVLSRLAEEEKDN 212
Query: 192 QAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL 250
Q +N S +A L S ++S++ S+ EL +K+FY+S N + +F +
Sbjct: 213 QQKLSANITAFSNYSATLKS--QLSKVVELSELSELELLSQIKIFYESENESSPSIFSI 269
>gi|15431318 keratin 38 [Homo sapiens]
Length = 456
Score = 30.8 bits (68), Expect = 2.1
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Query: 158 LRLEQETEPLRNINRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQ 217
LR+E + EP ++NR L E +A L + Q + + G++ Q S E Q
Sbjct: 257 LRIELDIEPTIDLNRVLGEMRAQYEAMLE--TNRQDVEQWFQAQSEGISLQDMSCSEELQ 314
Query: 218 MCTQQAGSDRELAKALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQG 277
C + R AL+V Q+ +T + L F T ++ + + EEQ
Sbjct: 315 CCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAEDRFG-TELAQMQSLISNVEEQL 373
Query: 278 EEALLDL 284
E DL
Sbjct: 374 SEIRADL 380
>gi|167001141 glypican 1 precursor [Homo sapiens]
Length = 558
Score = 30.8 bits (68), Expect = 2.1
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 170 INRALREENVLLKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL 229
+ ALR+ + +L+A LA + L S T Q G ++ TQ A + R+L
Sbjct: 85 LETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDL 144
Query: 230 AKALKVFYQSMN 241
L+++Y+ N
Sbjct: 145 YSELRLYYRGAN 156
>gi|167234405 hypothetical protein LOC284325 [Homo sapiens]
Length = 351
Score = 30.8 bits (68), Expect = 2.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 298 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP--- 354
S++PSPP P P SA+PSPP +P +P LPP P
Sbjct: 24 SSIPSPPLP------PSPLDFSALPSPPWSQQTPVPPPLP-----LPPPPAATGPAPRHV 72
Query: 355 FIHQRSQMFKDLGD 368
F ++SQ+ K+ D
Sbjct: 73 FGLEKSQLLKEAFD 86
>gi|116235460 YTH domain family, member 3 [Homo sapiens]
Length = 585
Score = 30.4 bits (67), Expect = 2.8
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 298 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFI 356
SAVP PP +H + S V +PPT Q LPPQ + Q +P I
Sbjct: 263 SAVPPPPIKHNMNIGTWDEKGSVVKAPPT-------------QPVLPPQTIIQQPQPLI 308
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 30.4 bits (67), Expect = 2.8
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 130 LVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVLLKASLAKIA 189
L D + S V ++++ AS++I L+LE+E + L++ + LR+ +++L+ S K
Sbjct: 445 LSDASRKSFVFELNECASSRI-------LKLEKENQSLQSTIQGLRDASLVLEESGLKCG 497
Query: 190 SGQAPKPSNTLKISGMTAQLPSAGEMSQ 217
+ + KI + QL + +Q
Sbjct: 498 ELEKENHQLSKKIEKLQTQLEREKQSNQ 525
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 300 VPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPP 345
+P PP SLPFP S +P+ P V + + G+PS +PP
Sbjct: 476 LPPPPPGAPLPSLPFP-PVSMMPNGPMPVPQMMNFGLPSLAPLVPP 520
>gi|238624195 hypothetical protein LOC221545 isoform 3 [Homo
sapiens]
Length = 496
Score = 30.0 bits (66), Expect = 3.6
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 287 ERESAALSGRLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYL 343
E S L G S PP + +PF +A PSP T P G PS + +L
Sbjct: 279 ELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPAT------PSGDPSMEEHL 329
>gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo
sapiens]
Length = 315
Score = 30.0 bits (66), Expect = 3.6
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 287 ERESAALSGRLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYL 343
E S L G S PP + +PF +A PSP T P G PS + +L
Sbjct: 98 ELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPAT------PSGDPSMEEHL 148
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,820,870
Number of Sequences: 37866
Number of extensions: 680588
Number of successful extensions: 3198
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 3093
Number of HSP's gapped (non-prelim): 166
length of query: 383
length of database: 18,247,518
effective HSP length: 104
effective length of query: 279
effective length of database: 14,309,454
effective search space: 3992337666
effective search space used: 3992337666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.