Guide to the Human Genome
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Name: BECN1L1 Sequence: fasta or formatted (431aa) NCBI GI: 239753084
Description:

PREDICTED: Beclin-1-like protein 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [431aa] PREDICTED: Beclin-1-like protein 1
alt prot [431aa] PREDICTED: Beclin-1-like protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         40           3
 C cysteine            2.3         10           1
 D aspartate           5.8         25           2
 E glutamate           9.0         39           2
 F phenylalanine       3.0         13           1
 G glycine             7.0         30           2
 H histidine           1.6          7           1
 I isoleucine          3.7         16           1
 K lysine              3.0         13           1
 L leucine            13.0         56           4
 M methionine          1.6          7           1
 N asparagine          3.9         17           2
 P proline             3.0         13           2
 Q glutamine           7.4         32           2
 R arginine            6.5         28           1
 S serine              6.0         26           2
 T threonine           5.1         22           2
 V valine              4.4         19           2
 W tryptophan          1.4          6           1
 X unknown             0.2          1           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Beclin-1-like protein 1 
BECN1L1               1.000   PREDICTED: Beclin-1-like protein 1 
BECN1L1               1.000   PREDICTED: Beclin-1-like protein 1 
BECN1                 0.525   beclin 1 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 1 
EFCAB4B               0.018   EF-hand calcium binding domain 4B isoform b 
EFCAB4B               0.018   EF-hand calcium binding domain 4B isoform a 
CEP110                0.018   centrosomal protein 110kDa 
RRBP1                 0.017   ribosome binding protein 1 
RRBP1                 0.017   ribosome binding protein 1 
DCTN1                 0.017   dynactin 1 isoform 4 
DCTN1                 0.017   dynactin 1 isoform 3 
DCTN1                 0.017   dynactin 1 isoform 2 
DCTN1                 0.017   dynactin 1 isoform 1 
MYH3                  0.017   myosin, heavy chain 3, skeletal muscle, embryonic [H...
PPFIA2                0.017   PTPRF interacting protein alpha 2 
DSP                   0.017   desmoplakin isoform I 
PLEC1                 0.017   plectin 1 isoform 11 
PLEC1                 0.017   plectin 1 isoform 10 
PLEC1                 0.017   plectin 1 isoform 8 
PLEC1                 0.017   plectin 1 isoform 7 
PLEC1                 0.017   plectin 1 isoform 6 
PLEC1                 0.017   plectin 1 isoform 3 
PLEC1                 0.017   plectin 1 isoform 2 
PLEC1                 0.017   plectin 1 isoform 1 
KIAA1524              0.016   p90 autoantigen 
CCDC157               0.016   coiled-coil domain containing 157 
SLMAP                 0.016   sarcolemma associated protein 
FBF1                  0.016   Fas (TNFRSF6) binding factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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