Guide to the Human Genome
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Search of human proteins with 239752566

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752566 PREDICTED: similar to hCG2039164 [Homo sapiens]
         (239 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752566 PREDICTED: similar to hCG2039164 [Homo sapiens]          493   e-140
gi|169178703 PREDICTED: similar to hCG2039164 [Homo sapiens]          490   e-139
gi|169184233 PREDICTED: similar to hCG2039164 [Homo sapiens]          462   e-130
gi|113420725 PREDICTED: similar to hCG2039164 [Homo sapiens]          459   e-130
gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens]      84   8e-17
gi|62865887 G protein-coupled receptor 54 [Homo sapiens]               39   0.005
gi|4826706 EBV-induced G protein-coupled receptor 2 [Homo sapiens]     39   0.005
gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom...    34   0.13 
gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens]     33   0.17 
gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens]     33   0.17 
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]     33   0.17 
gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens]     33   0.17 
gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens]          33   0.22 
gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens]          33   0.22 
gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens]         33   0.22 
gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens]          33   0.22 
gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]          33   0.22 
gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens]          33   0.22 
gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens]          33   0.22 
gi|9506745 urotensin 2 receptor [Homo sapiens]                         33   0.22 
gi|154091328 chemokine (C-C motif) receptor 5 [Homo sapiens]           33   0.29 
gi|4502639 chemokine (C-C motif) receptor 5 [Homo sapiens]             33   0.29 
gi|183979982 chemokine (C-C motif) receptor 2 isoform B [Homo sa...    32   0.64 
gi|183979980 chemokine (C-C motif) receptor 2 isoform A [Homo sa...    32   0.64 
gi|5031627 chemokine (C-C motif) receptor 4 [Homo sapiens]             32   0.64 
gi|170932505 neuromedin U receptor 2 [Homo sapiens]                    32   0.64 
gi|4503171 chemokine (C-X3-C motif) receptor 1 [Homo sapiens]          31   0.83 
gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]            31   0.83 
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]            31   0.83 
gi|4502631 chemokine (C-C motif) receptor 1 [Homo sapiens]             31   0.83 

>gi|239752566 PREDICTED: similar to hCG2039164 [Homo sapiens]
          Length = 239

 Score =  493 bits (1269), Expect = e-140
 Identities = 239/239 (100%), Positives = 239/239 (100%)

Query: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60
           MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW
Sbjct: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60

Query: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120
           SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL
Sbjct: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120

Query: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180
           FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS
Sbjct: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180

Query: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239
           LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG
Sbjct: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239


>gi|169178703 PREDICTED: similar to hCG2039164 [Homo sapiens]
          Length = 239

 Score =  490 bits (1261), Expect = e-139
 Identities = 238/239 (99%), Positives = 238/239 (99%)

Query: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60
           MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW
Sbjct: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60

Query: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120
           SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL
Sbjct: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120

Query: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180
           FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS
Sbjct: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180

Query: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239
           LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVM LAATDLLFTLLVSQVTIAMYMKGG
Sbjct: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMWLAATDLLFTLLVSQVTIAMYMKGG 239


>gi|169184233 PREDICTED: similar to hCG2039164 [Homo sapiens]
          Length = 239

 Score =  462 bits (1188), Expect = e-130
 Identities = 226/239 (94%), Positives = 228/239 (95%)

Query: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60
           MGC PSGKGRGDGALPGEPRRKES FQIVFQGFNVHFINSESV +NTRELPFPGDGSCQW
Sbjct: 1   MGCGPSGKGRGDGALPGEPRRKESTFQIVFQGFNVHFINSESVGNNTRELPFPGDGSCQW 60

Query: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120
           SEIGWGEEEEWEAQFINIKISKGVLLAGAEGA RFGWLPLVSGCNPESGIEFLPCHVSI 
Sbjct: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGAWRFGWLPLVSGCNPESGIEFLPCHVSIP 120

Query: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180
           FPG  SNALQVVISLMVALSLFC LQTQLR PGLRTTSHCHVNPFPGQCVLGLEP+LLDS
Sbjct: 121 FPGRGSNALQVVISLMVALSLFCHLQTQLRTPGLRTTSHCHVNPFPGQCVLGLEPNLLDS 180

Query: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239
           LGPSIFGVVGNLVAIVVLCKS KEQKETTFYTVMRL ATDLLFTLLVSQVTIAMYMKGG
Sbjct: 181 LGPSIFGVVGNLVAIVVLCKSRKEQKETTFYTVMRLVATDLLFTLLVSQVTIAMYMKGG 239


>gi|113420725 PREDICTED: similar to hCG2039164 [Homo sapiens]
          Length = 239

 Score =  459 bits (1182), Expect = e-130
 Identities = 226/239 (94%), Positives = 228/239 (95%)

Query: 1   MGCRPSGKGRGDGALPGEPRRKESAFQIVFQGFNVHFINSESVASNTRELPFPGDGSCQW 60
           MGC PSGKGRGDGALP EPRRKES FQIVFQGFNVHFINSESV +NTRELPFPGDGSCQW
Sbjct: 1   MGCGPSGKGRGDGALPREPRRKESNFQIVFQGFNVHFINSESVGNNTRELPFPGDGSCQW 60

Query: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGACRFGWLPLVSGCNPESGIEFLPCHVSIL 120
           SEIGWGEEEEWEAQFINIKISKGVLLAGAEGA RFGWLPLVSGCNPESGIEFLPCHVSI 
Sbjct: 61  SEIGWGEEEEWEAQFINIKISKGVLLAGAEGAWRFGWLPLVSGCNPESGIEFLPCHVSIP 120

Query: 121 FPGHRSNALQVVISLMVALSLFCPLQTQLRAPGLRTTSHCHVNPFPGQCVLGLEPDLLDS 180
           FPG  SNALQVVISLMVALSLFC LQTQLR PGLRTTSHCHVNPFPGQCVLGLEP+LLDS
Sbjct: 121 FPGRGSNALQVVISLMVALSLFCHLQTQLRTPGLRTTSHCHVNPFPGQCVLGLEPNLLDS 180

Query: 181 LGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239
           LGPSIFGVVGNLVAIVVLCKS KEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG
Sbjct: 181 LGPSIFGVVGNLVAIVVLCKSRKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKGG 239


>gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens]
          Length = 488

 Score = 84.3 bits (207), Expect = 8e-17
 Identities = 47/55 (85%), Positives = 47/55 (85%), Gaps = 1/55 (1%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYT-VMRLAATDLLFTLLVSQVTIAMYMKG 238
           IFGVVGNLVAIVVLCKS KEQKETTFYT V  LA TDLL TLLVS VTIA YMKG
Sbjct: 29  IFGVVGNLVAIVVLCKSRKEQKETTFYTLVCGLAVTDLLGTLLVSPVTIATYMKG 83


>gi|62865887 G protein-coupled receptor 54 [Homo sapiens]
          Length = 398

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMY 235
           + G+VGN + I V+C+ HK  +  T + +  LAATD+ F L     T  +Y
Sbjct: 54  LLGLVGNSLVIYVICR-HKPMRTVTNFYIANLAATDVTFLLCCVPFTALLY 103


>gi|4826706 EBV-induced G protein-coupled receptor 2 [Homo sapiens]
          Length = 361

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYMKG 238
           I G+VGNL+A+VV+ ++ K+   TT Y+   L  +D+LFT  +    IA Y  G
Sbjct: 43  IIGLVGNLLALVVIVQNRKKINSTTLYST-NLVISDILFTTAL-PTRIAYYAMG 94


>gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Homo
           sapiens]
          Length = 358

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 10/61 (16%)

Query: 187 GVVGNLVAIVVL---------CKSHKEQKETTFYT-VMRLAATDLLFTLLVSQVTIAMYM 236
           GV+GNL+A+ +L         C + +    + F+  V  L  TDLL T L+S V +A Y 
Sbjct: 35  GVLGNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVTELVFTDLLGTCLISPVVLASYA 94

Query: 237 K 237
           +
Sbjct: 95  R 95


>gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens]
          Length = 455

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 182 GPSIFGVVGNLVAIV-VLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           G  +FGV+GN++ I+ V C  H+     T Y ++ LA  DLL T  V
Sbjct: 35  GLILFGVLGNILVILSVAC--HRHLHSVTHYYIVNLAVADLLLTSTV 79


>gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens]
          Length = 466

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 182 GPSIFGVVGNLVAIV-VLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           G  +FGV+GN++ I+ V C  H+     T Y ++ LA  DLL T  V
Sbjct: 35  GLILFGVLGNILVILSVAC--HRHLHSVTHYYIVNLAVADLLLTSTV 79


>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
          Length = 475

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 182 GPSIFGVVGNLVAIV-VLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           G  +FGV+GN++ I+ V C  H+     T Y ++ LA  DLL T  V
Sbjct: 35  GLILFGVLGNILVILSVAC--HRHLHSVTHYYIVNLAVADLLLTSTV 79


>gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens]
          Length = 429

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 182 GPSIFGVVGNLVAIV-VLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           G  +FGV+GN++ I+ V C  H+     T Y ++ LA  DLL T  V
Sbjct: 35  GLILFGVLGNILVILSVAC--HRHLHSVTHYYIVNLAVADLLLTSTV 79


>gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens]
          Length = 359

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens]
          Length = 428

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens]
          Length = 402

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens]
          Length = 360

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]
          Length = 387

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens]
          Length = 378

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens]
          Length = 388

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           +  ++GNL+ +V +C   + +K  T Y ++ LA  DLL ++LV
Sbjct: 31  LMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLV 73


>gi|9506745 urotensin 2 receptor [Homo sapiens]
          Length = 389

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 177 LLDSLGPSIFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLVSQVTIAMYM 236
           LL ++G  + GVVGN   +VV C+S +       Y V+ LA  DLL+ L +  + +A Y+
Sbjct: 57  LLSAMG--VVGVVGNAYTLVVTCRSLRAVASMYVY-VVNLALADLLYLLSIPFI-VATYV 112


>gi|154091328 chemokine (C-C motif) receptor 5 [Homo sapiens]
          Length = 352

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           IFG VGN++ I++L    + +  T  Y ++ LA +DL F L V
Sbjct: 42  IFGFVGNMLVILILINCKRLKSMTDIY-LLNLAISDLFFLLTV 83


>gi|4502639 chemokine (C-C motif) receptor 5 [Homo sapiens]
          Length = 352

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLLV 227
           IFG VGN++ I++L    + +  T  Y ++ LA +DL F L V
Sbjct: 42  IFGFVGNMLVILILINCKRLKSMTDIY-LLNLAISDLFFLLTV 83


>gi|183979982 chemokine (C-C motif) receptor 2 isoform B [Homo
           sapiens]
          Length = 360

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTL 225
           IFG VGN++ +++L    K +  T  Y ++ LA +DLLF +
Sbjct: 54  IFGFVGNMLVVLILINCKKLKCLTDIY-LLNLAISDLLFLI 93


>gi|183979980 chemokine (C-C motif) receptor 2 isoform A [Homo
           sapiens]
          Length = 374

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTL 225
           IFG VGN++ +++L    K +  T  Y ++ LA +DLLF +
Sbjct: 54  IFGFVGNMLVVLILINCKKLKCLTDIY-LLNLAISDLLFLI 93


>gi|5031627 chemokine (C-C motif) receptor 4 [Homo sapiens]
          Length = 360

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLF 223
           +FG++GN V ++VL K +K  +  T   ++ LA +DLLF
Sbjct: 51  VFGLLGNSVVVLVLFK-YKRLRSMTDVYLLNLAISDLLF 88


>gi|170932505 neuromedin U receptor 2 [Homo sapiens]
          Length = 415

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLFTLL 226
           + GV+GN++  +V+ + H+  K  T Y +  LA +DLL  LL
Sbjct: 57  VVGVIGNVLVCLVILQ-HQAMKTPTNYYLFSLAVSDLLVLLL 97


>gi|4503171 chemokine (C-X3-C motif) receptor 1 [Homo sapiens]
          Length = 355

 Score = 31.2 bits (69), Expect = 0.83
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 187 GVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLF 223
           G+VGNL+ +  L  S K +  T  Y ++ LA +DLLF
Sbjct: 45  GLVGNLLVVFALTNSKKPKSVTDIY-LLNLALSDLLF 80


>gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 31.2 bits (69), Expect = 0.83
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 9   GRGDGALPGEPRRKESAFQIVFQGF-----NVHFINSESVASNTRELPFPGDGSC---QW 60
           G+  G  PG+PRR   +F  V +         H +++ + A   R  P P + SC    W
Sbjct: 110 GQVPGCFPGKPRRSPRSFPPVLRALLGMKVTAHQMSARTGAERGRLEPLPTNQSCGQAGW 169

Query: 61  SEIGWGEE 68
               WG+E
Sbjct: 170 KCRLWGDE 177


>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 31.2 bits (69), Expect = 0.83
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 9   GRGDGALPGEPRRKESAFQIVFQGF-----NVHFINSESVASNTRELPFPGDGSC---QW 60
           G+  G  PG+PRR   +F  V +         H +++ + A   R  P P + SC    W
Sbjct: 110 GQVPGCFPGKPRRSPRSFPPVLRALLGMKVTAHQMSARTGAERGRLEPLPTNQSCGQAGW 169

Query: 61  SEIGWGEE 68
               WG+E
Sbjct: 170 KCRLWGDE 177


>gi|4502631 chemokine (C-C motif) receptor 1 [Homo sapiens]
          Length = 355

 Score = 31.2 bits (69), Expect = 0.83
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 185 IFGVVGNLVAIVVLCKSHKEQKETTFYTVMRLAATDLLF 223
           + G+VGN++ ++VL + +K  K  T   ++ LA +DLLF
Sbjct: 46  VIGLVGNILVVLVLVQ-YKRLKNMTSIYLLNLAISDLLF 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,025,404
Number of Sequences: 37866
Number of extensions: 463042
Number of successful extensions: 979
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 953
Number of HSP's gapped (non-prelim): 50
length of query: 239
length of database: 18,247,518
effective HSP length: 99
effective length of query: 140
effective length of database: 14,498,784
effective search space: 2029829760
effective search space used: 2029829760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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